Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k04r
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.052
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    24   1.1  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   4.5  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   4.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 0.052
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -3

Query: 251 YFCILNVCVTVQILNYRIIIWISGEFGVICIY*FLHVHL 135
           ++C+L + + +    Y  I++      ++CIY F ++HL
Sbjct: 228 FYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHL 266


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 273 KLTKRYVELIITKERPTVSEITIKKNM 353
           +L K YV+ ++ K R +   + +KKNM
Sbjct: 43  RLLKSYVDCLLEKGRCSPDGLELKKNM 69


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 213 YLHCYAHIQNTKISVKTYVFKLTKRYVELIITKERPTVSEITIKKNM 353
           Y   Y   QN  I       +LTK Y++ I+ K + T     +KK++
Sbjct: 17  YAEEYTVPQNIDIDEILKNDRLTKNYLDCILEKGKCTPEGEELKKDI 63


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -2

Query: 618 DYEEVGVDSTEG--ELDEENEY*SGMKNSRSVLGRKEPN 508
           +Y  VG+D       LDEEN+   G     S L  K PN
Sbjct: 56  NYAFVGLDKDCNIQVLDEENDINQGGLKRVSALKEKNPN 94


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 269 NISFNRYFCILNVCVTVQILNYRI 198
           +I+  +YFC++  C+   I  Y I
Sbjct: 378 DINSIQYFCLMARCLNTLIFYYHI 401


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,726
Number of Sequences: 336
Number of extensions: 3624
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)