Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k04r
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 109 2e-24
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 109 2e-24
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 109 2e-24
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 109 2e-24
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 108 4e-24
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 106 1e-23
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 106 1e-23
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 106 1e-23
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 106 1e-23
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 105 4e-23
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 105 4e-23
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 105 4e-23
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 103 2e-22
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 102 3e-22
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 50 1e-06
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 48 5e-06
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 48 5e-06
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 32 0.38
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 32 0.38
Z93396-5|CAB07714.1| 633|Caenorhabditis elegans Hypothetical pr... 30 2.0
DQ645956-1|ABG36764.1| 624|Caenorhabditis elegans molting prote... 30 2.0
AF067945-12|AAC17680.1| 840|Caenorhabditis elegans Patched rela... 30 2.0
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF067944-5|AAC17673.1| 335|Caenorhabditis elegans Seven tm rece... 28 6.1
AF067613-9|AAN73863.2| 326|Caenorhabditis elegans Serpentine re... 28 6.1
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 28 6.1
U64852-5|AAB04968.1| 746|Caenorhabditis elegans Hypothetical pr... 28 8.1
U58755-3|AAB00693.2| 332|Caenorhabditis elegans Seven tm recept... 28 8.1
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 109 bits (262), Expect = 2e-24
Identities = 50/61 (81%), Positives = 54/61 (88%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ HK DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS E +E +E
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGEEGDE 449
Query: 561 Y 559
Y
Sbjct: 450 Y 450
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 109 bits (262), Expect = 2e-24
Identities = 50/61 (81%), Positives = 54/61 (88%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ HK DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS E +E +E
Sbjct: 389 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGEEGDE 448
Query: 561 Y 559
Y
Sbjct: 449 Y 449
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 109 bits (262), Expect = 2e-24
Identities = 50/61 (81%), Positives = 54/61 (88%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ HK DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS E +E +E
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGEEGDE 449
Query: 561 Y 559
Y
Sbjct: 450 Y 450
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 109 bits (262), Expect = 2e-24
Identities = 50/61 (81%), Positives = 54/61 (88%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ HK DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS E +E +E
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGEEGDE 449
Query: 561 Y 559
Y
Sbjct: 450 Y 450
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 108 bits (260), Expect = 4e-24
Identities = 50/61 (81%), Positives = 56/61 (91%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ HK DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+D+ GE DEE++
Sbjct: 395 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDA--GEPDEEDD 452
Query: 561 Y 559
Y
Sbjct: 453 Y 453
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 106 bits (255), Expect = 1e-23
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ +K DLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS EG +E E
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADSNEGGEEEGEE 447
Query: 561 Y 559
Y
Sbjct: 448 Y 448
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 106 bits (255), Expect = 1e-23
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ +K DLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS EG +EE E
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADSNEGGNEEEGE 447
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 106 bits (255), Expect = 1e-23
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ +K DLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS EG +EE E
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADSNEGGNEEEGE 447
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 106 bits (255), Expect = 1e-23
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ +K DLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS EG +E E
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADSNEGGEEEGEE 447
Query: 561 Y 559
Y
Sbjct: 448 Y 448
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 105 bits (251), Expect = 4e-23
Identities = 47/61 (77%), Positives = 53/61 (86%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ +K DLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS EG ++ E
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADSNEGLEEDGEE 447
Query: 561 Y 559
Y
Sbjct: 448 Y 448
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 105 bits (251), Expect = 4e-23
Identities = 47/61 (77%), Positives = 53/61 (86%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ +K DLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS EG ++ E
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADSNEGLEEDGEE 447
Query: 561 Y 559
Y
Sbjct: 448 Y 448
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 105 bits (251), Expect = 4e-23
Identities = 47/61 (77%), Positives = 53/61 (86%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ +K DLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVG DS EG ++ E
Sbjct: 25 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEVGADSNEGLEEDGEE 84
Query: 561 Y 559
Y
Sbjct: 85 Y 85
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 103 bits (246), Expect = 2e-22
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEE 568
++ HK DLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVGVDS + DEE
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSFDPN-DEE 446
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 102 bits (244), Expect = 3e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEEN 565
++ HK DLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEE+G D ++D+++
Sbjct: 396 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDELPDDIDDQS 454
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 102 bits (244), Expect = 3e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEEN 565
++ HK DLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEE+G D ++D+++
Sbjct: 368 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDELPDDIDDQS 426
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 99 bits (238), Expect = 2e-21
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ +K DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG DS + + ++E
Sbjct: 385 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSDAND-NGDDE 443
Query: 561 Y 559
Y
Sbjct: 444 Y 444
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/60 (70%), Positives = 51/60 (85%)
Frame = -2
Query: 741 QMGHKXDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENE 562
++ HK DLMY+KRAFVHW+VGEGMEEGEF EAR+DLAALEKDY EV D+ +L+EEN+
Sbjct: 393 RLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDT--ADLEEEND 450
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Frame = -2
Query: 717 MYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGVDSTEGELDEENE 562
M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E D EGE DE ++
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADD-EGEFDEHDQ 441
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = -2
Query: 717 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTE--GELD 574
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E GELD
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAEEDGELD 437
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = -2
Query: 717 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGE-LDE 571
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E E LDE
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDEPLDE 437
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/48 (39%), Positives = 33/48 (68%)
Frame = -2
Query: 717 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELD 574
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ + E ++D
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATAEDDVD 435
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = -2
Query: 717 MYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGVDSTEGE 580
M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E D E
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADEDAAE 436
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = -2
Query: 717 MYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGVDSTEGE 580
M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E D E
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAADEDAAE 436
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = -2
Query: 717 MYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 604
++ ++AF+HWY MEE EF++A DL + + YE+V
Sbjct: 386 LFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYEKV 423
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = -2
Query: 717 MYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 604
++ ++AF+HWY MEE EF++A DL + + YE+V
Sbjct: 386 LFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYEKV 423
>Z93396-5|CAB07714.1| 633|Caenorhabditis elegans Hypothetical
protein ZC15.7 protein.
Length = 633
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 225 YAHIQNTKISVKTYVFKLTKRYVELIITKE 314
+A ++NT SV FKL KRY E I+ K+
Sbjct: 604 FAELRNTATSVLQRHFKLCKRYKEFILRKK 633
>DQ645956-1|ABG36764.1| 624|Caenorhabditis elegans molting protein
MLT-4 protein.
Length = 624
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 225 YAHIQNTKISVKTYVFKLTKRYVELIITKE 314
+A ++NT SV FKL KRY E I+ K+
Sbjct: 595 FAELRNTATSVLQRHFKLCKRYKEFILRKK 624
>AF067945-12|AAC17680.1| 840|Caenorhabditis elegans Patched related
family protein 15 protein.
Length = 840
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 353 HIFFNRYFGYRRPFFSDD-QFYVTFCQFENISFNRYF 246
+ + N + YR+ FF +D +FY T F +SFN ++
Sbjct: 567 NFWLNEFNNYRQFFFQEDAKFYETLKSFLKVSFNSHW 603
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical
protein D2085.1 protein.
Length = 2198
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 261 TYVFKLTKRYVELIITKERPT 323
TY +TK YV +I KERPT
Sbjct: 447 TYFLPITKEYVTDVIKKERPT 467
>Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical
protein T08G3.7 protein.
Length = 943
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Frame = +2
Query: 317 ADGIRNND*KKY---VSDHDVVNTQTLIDN---SIHKTYSIFNKIISLWNFNEKKSQSLI 478
A+GI ++D K +S+ D+V T +I + SI NK+ISL ++ K S+I
Sbjct: 274 AEGINDSDGPKLGGLISELDLVKTSQCFSQHYETIRELMSIVNKLISLRQLHDGKISSMI 333
>Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical
protein ZK673.4 protein.
Length = 476
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 374 NTQTLIDNSIHKTYSIFNKIISL 442
N + L DN+ H +SIFNKI+ +
Sbjct: 250 NIEDLPDNAFHTGHSIFNKILKM 272
>AF067944-5|AAC17673.1| 335|Caenorhabditis elegans Seven tm
receptor protein 67 protein.
Length = 335
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 299 QFYVTFCQFENISF-NRYFCILNVCVTVQILNYRIIIWI 186
QFY+ F ++ F RY C+ N T + IIWI
Sbjct: 96 QFYLIVISFISVQFVYRYLCVFNEQKTKYFDGLKTIIWI 134
>AF067613-9|AAN73863.2| 326|Caenorhabditis elegans Serpentine
receptor, class z protein20 protein.
Length = 326
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 416 SIFNKIISLWNFNEKKSQSLI*IVDFKYRYEFGSFRPRTLRLFFIPL 556
+I +I W NEKK ++++ + + Y + +F +T+ FF+ +
Sbjct: 133 AITRAVIYFWPSNEKKIKTILIHIHKRVHYLYFAFITKTVIFFFVAM 179
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = -2
Query: 678 EGMEEGEFSEAREDLAALEKDYEEVGVDSTEGELDEENEY*SGMKNSRSVLGRKEPNSY 502
E EE E SE ED E++YE+ + + E DEE E G +N+ + E Y
Sbjct: 900 EDEEEDEDSEEDED----EEEYEDEESEYEDEEEDEEEEEEEGKENNEEKKVQNEIKHY 954
>U64852-5|AAB04968.1| 746|Caenorhabditis elegans Hypothetical
protein W01A11.5 protein.
Length = 746
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 662 PSSIPSPTYQCTNARLAYIKSXLWPIWP 745
P+ PSP Q + +I++ LWPI P
Sbjct: 16 PTKFPSPIEQASYKTYNWIENTLWPIKP 43
>U58755-3|AAB00693.2| 332|Caenorhabditis elegans Seven tm receptor
protein 48 protein.
Length = 332
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 296 FYVTFCQFENISFN-RYFCILNVCVTVQILNYRIIIWI 186
FY+ F ++ F RY+ + N+ VT + N +I+W+
Sbjct: 99 FYLLMMSFISVQFLFRYYTLTNIRVTKRFENGGVILWM 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,847,392
Number of Sequences: 27780
Number of extensions: 329059
Number of successful extensions: 876
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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