Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k04f
(637 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 330 5e-91
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 327 5e-90
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 314 4e-86
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 215 2e-56
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 162 2e-40
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 157 5e-39
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 156 2e-38
03_01_0034 + 318432-318825,318902-319851 155 4e-38
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 154 5e-38
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 153 1e-37
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 137 8e-33
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 134 6e-32
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 116 1e-26
10_06_0102 + 10758601-10758948,10759051-10759257,10759349-107595... 31 0.77
06_03_0178 + 17594062-17595576 29 3.1
12_02_0781 + 23105554-23106855,23107191-23107511,23107581-231076... 29 4.1
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 29 4.1
01_06_1023 + 33890733-33891034,33891171-33891258,33894253-338945... 29 4.1
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 28 7.1
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 28 7.1
07_01_0284 - 2082249-2082256,2082496-2083009 27 9.4
02_05_0420 + 28821717-28821854,28821944-28822210,28822299-288225... 27 9.4
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 330 bits (811), Expect = 5e-91
Identities = 148/180 (82%), Positives = 163/180 (90%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 277
MRECIS+HIGQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 457
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVD+ LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 637
RIRKLAD CTGLQGFLVF+ LL+ERLSVDYGKKSKL F++YP+PQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 327 bits (803), Expect = 5e-90
Identities = 147/180 (81%), Positives = 162/180 (90%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 277
MRECIS+HIGQAG+Q+GNACWELYCLEHGIQ DGQMPSD+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 457
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVD+ LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 458 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 637
RIRKLAD CTGLQGFLVF+ LL+ERLSVDYGKKSKL F++YP+PQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 314 bits (771), Expect = 4e-86
Identities = 141/180 (78%), Positives = 159/180 (88%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 277
MRE IS+HIGQAG+Q+GNACWELYCLEHGI+PDG MPSD T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 457
HVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVD+ LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 458 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVSTA 637
R+RKLAD CTGLQGFLVF+ LL+ERLSVDYGKKSKL F+IYP+PQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 215 bits (526), Expect = 2e-56
Identities = 99/139 (71%), Positives = 116/139 (83%)
Frame = +2
Query: 209 SDKTLGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE 388
SD T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 389 DAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERL 568
DAANN+ARGHYT+G+E+VD+ LDR+RKLAD CTGLQGFLVF+ LL+ERL
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 217
Query: 569 SVDYGKKSKLEFSIYPAPQ 625
SVDYG+KSKL F+IYP+PQ
Sbjct: 218 SVDYGRKSKLGFTIYPSPQ 236
Score = 81.8 bits (193), Expect = 4e-16
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSD 214
MRE IS+HIGQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 162 bits (393), Expect = 2e-40
Identities = 77/184 (41%), Positives = 109/184 (59%)
Frame = +2
Query: 80 RKSSYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFS 259
+K KMRE + + GQ G QIG+ WE+ C EHGI P G+ L + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 260 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 439
E G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Query: 440 VDVVLDRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPA 619
+D VLD +RK A+ C LQGF V H LL+ ++ +Y + L FS++P+
Sbjct: 293 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 352
Query: 620 PQVS 631
P+VS
Sbjct: 353 PKVS 356
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 157 bits (382), Expect = 5e-39
Identities = 75/178 (42%), Positives = 106/178 (59%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG+ WE+ C EHGI P G+ L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQL--ERVNVYYNEASCGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 457
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVS 631
+RK A+ C LQGF V H LL+ ++ +Y + L FS++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 156 bits (378), Expect = 2e-38
Identities = 74/178 (41%), Positives = 106/178 (59%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHGI G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 457
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVS 631
+RK A+ C LQGF V H LL+ ++ +Y + L FS++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 155 bits (375), Expect = 4e-38
Identities = 73/178 (41%), Positives = 104/178 (58%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHGI G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 457
VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 458 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVS 631
+RK A+ C LQGF V H LL+ ++ +Y + L FS++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 154 bits (374), Expect = 5e-38
Identities = 72/178 (40%), Positives = 106/178 (59%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHG+ G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 457
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVS 631
+RK A+ C LQGF V H LL+ ++ +Y + L FS++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 153 bits (371), Expect = 1e-37
Identities = 73/178 (41%), Positives = 105/178 (58%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHGI G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 457
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYPAPQVS 631
+RK A+ C LQGF V H LL+ ++ +Y + L FS++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVS 176
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 137 bits (331), Expect = 8e-33
Identities = 75/199 (37%), Positives = 106/199 (53%), Gaps = 21/199 (10%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHGI P G+ + L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 457
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQ---------------------GFLVFHXXXXXXXXXXXXLLMERLSV 574
+RK A+ C LQ GF V H LL+ ++
Sbjct: 119 VVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGMGTLLISKIRE 178
Query: 575 DYGKKSKLEFSIYPAPQVS 631
+Y + L FS++P+P+VS
Sbjct: 179 EYPDRMMLTFSVFPSPKVS 197
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 134 bits (324), Expect = 6e-32
Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 16/194 (8%)
Frame = +2
Query: 98 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGK 277
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 278 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLD 457
HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 458 RIRKLADQCTGLQ----------------GFLVFHXXXXXXXXXXXXLLMERLSVDYGKK 589
+RK A+ C LQ GF V H LL+ ++ +Y +
Sbjct: 119 VVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 178
Query: 590 SKLEFSIYPAPQVS 631
L FS++P+P+VS
Sbjct: 179 MMLTFSVFPSPKVS 192
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 116 bits (280), Expect = 1e-26
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Frame = +2
Query: 101 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKH 280
RE I++ +GQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 281 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDVVL 454
+PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 455 DRIRKLADQCTGLQGFLVFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSIYP 616
D I + AD L+GF++ H L+E L+ Y KK +S++P
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
>10_06_0102 + 10758601-10758948,10759051-10759257,10759349-10759507,
10759617-10759709,10759913-10760008,10760457-10760724,
10760805-10761047,10761298-10761422,10761499-10761615,
10761705-10761779,10761886-10761942,10762035-10762139,
10762244-10762330,10762790-10763047,10763075-10763263,
10763418-10763528,10763640-10763729,10763814-10763990,
10764075-10764152,10764412-10764726,10764819-10765162,
10765304-10765541,10765631-10765998,10766106-10766316,
10766622-10766801,10766886-10769045,10769151-10769207
Length = 2251
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 480 NAQGFRVSSCFTRSEVEPAPDSHHF*WSVSPLTTERSPSL 599
N G RV SC + + P H F WSV + E P L
Sbjct: 1208 NGAGVRVVSCIIQRDEGRPPMRHSFQWSVDKIYYEEDPML 1247
>06_03_0178 + 17594062-17595576
Length = 504
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 102 GNASPFTSVKPAYRLATPAGSCTASSMESSLMVRCRQIRPSAVETTPLTRSSARPA 269
G+ASP T A + A + ++ +++ SL R PSA TTP TR S P+
Sbjct: 435 GSASPRTFSPAAQKFVRNAIAKSSRTIDESLRASYRGTTPSA--TTPKTRFSRDPS 488
>12_02_0781 +
23105554-23106855,23107191-23107511,23107581-23107667,
23107907-23108302,23108327-23108500,23108600-23108764,
23108857-23109151,23109319-23109446,23109681-23109986,
23110531-23110591,23110676-23110915,23111251-23111372
Length = 1198
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1
Query: 532 GSTSERVKHEETLKPCALVSQL 467
GST ++ ++EETLK C+LV L
Sbjct: 462 GSTMDKPRYEETLKFCSLVHDL 483
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 237 SSPPPRVLSDGI*PSGWIPCSRQYSSQ 157
S P P LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>01_06_1023 +
33890733-33891034,33891171-33891258,33894253-33894522,
33894616-33894724,33894833-33894950,33895051-33895183,
33895306-33895493,33895566-33895752,33895797-33895841,
33895850-33895917,33896093-33896186,33896284-33896475,
33896656-33896736,33897363-33897425
Length = 645
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -1
Query: 631 GHLWSRIDGKLKLGLLSVVNGETLHQK*CESGAGSTSERVKHEETLKPCALVSQLPDPVQ 452
GHL S +D K L+ V+G+ Q+ + G G T+ V T K ++ LP P +
Sbjct: 209 GHL-SSVDSKATSMRLTWVSGDARPQQ-VQYGTGKTATSVATTFTHKDMCSIAVLPSPAK 266
Query: 451 NY 446
++
Sbjct: 267 DF 268
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 197 GQMPSDKTLGGGDDSFNTFF 256
GQMPS LGG FNT+F
Sbjct: 240 GQMPSTSRLGGKYHIFNTYF 259
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 33 RLGRAQTLFSSKSFF*ENLLTK*GNASPFTSVKPAYRLATPAGSCTASS 179
R G +F+S S + LT NA P ++ P+ RLA P SC+A++
Sbjct: 101 RTGSGPLIFTSCSSSATSPLT---NALPAGNICPSGRLAKPLSSCSAAA 146
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 270 APVSLKNVLKESSPPPRVLSDGI*PSGWIPCSRQYSSQQALPI 142
+P+ K E PPP + I W P + ++QQ +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>02_05_0420 +
28821717-28821854,28821944-28822210,28822299-28822568,
28822656-28823246,28823336-28823479
Length = 469
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 589 LLSVVNGETLHQK*CESGAGSTSERVKHEETLKPCALVSQLPD 461
+LS+ G+T++ ++ +GSTSE V +E P VS PD
Sbjct: 162 VLSIALGDTVYL--WDASSGSTSELVTVDEDSGPITSVSWAPD 202
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,076,597
Number of Sequences: 37544
Number of extensions: 434728
Number of successful extensions: 1314
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -