Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k02f
(629 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212; Euka... 265 7e-70
UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2; ... 198 1e-49
UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8; Ascomy... 190 2e-47
UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal ... 162 5e-39
UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins contai... 158 1e-37
UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal ... 144 1e-33
UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253, w... 144 1e-33
UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-pro... 134 2e-30
UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomona... 128 8e-29
UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia in... 122 5e-27
UniRef50_Q01AT5 Cluster: Chromosome 04 contig 1, DNA sequence; n... 120 2e-26
UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamo... 120 2e-26
UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal ... 112 8e-24
UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiell... 111 1e-23
UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal ... 93 4e-18
UniRef50_UPI0000F33BDC Cluster: UPI0000F33BDC related cluster; n... 89 6e-17
UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;... 89 1e-16
UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1; Antono... 62 8e-09
UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5; Sulfolo... 60 6e-08
UniRef50_A7D0Q4 Cluster: Ribosomal protein L1; n=1; Halorubrum l... 54 4e-06
UniRef50_Q8PY52 Cluster: 50S ribosomal protein L1P; n=7; Archaea... 51 3e-05
UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza sativa... 50 6e-05
UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3; Archaea... 50 6e-05
UniRef50_Q8SRY5 Cluster: 60S RIBOSOMAL PROTEIN L10A; n=1; Enceph... 48 2e-04
UniRef50_Q9Y9W6 Cluster: 50S ribosomal protein L1P; n=1; Aeropyr... 47 4e-04
UniRef50_Q97BN2 Cluster: 50S ribosomal protein L1P; n=4; Thermop... 45 0.001
UniRef50_P13575 Cluster: 50S ribosomal protein L1P; n=5; Euryarc... 44 0.002
UniRef50_O27716 Cluster: 50S ribosomal protein L1P; n=3; Methano... 41 0.021
UniRef50_Q5CLP4 Cluster: At2g42650/F14N22.8; n=2; Cryptosporidiu... 40 0.049
UniRef50_Q9ZE23 Cluster: 50S ribosomal protein L1; n=7; Bacteria... 38 0.26
UniRef50_Q00XM9 Cluster: LSU ribosomal protein L1P; n=1; Ostreoc... 37 0.35
UniRef50_Q92J89 Cluster: 50S ribosomal protein L1; n=8; Alphapro... 36 1.1
UniRef50_Q0AYI8 Cluster: Translation initiation factor IF-2; n=1... 35 1.4
UniRef50_A2Y3N8 Cluster: DNA primase; n=4; Oryza sativa|Rep: DNA... 35 1.4
UniRef50_UPI0000ECD0EF Cluster: CDNA FLJ31980 fis, clone NT2RP70... 33 4.3
UniRef50_Q9FJ26 Cluster: DNA primase; n=1; Arabidopsis thaliana|... 33 4.3
UniRef50_A4R562 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_Q5QZU9 Cluster: Methyl-accepting chemotaxis protein; n=... 33 5.7
UniRef50_Q3KPN0 Cluster: LOC733385 protein; n=2; Xenopus laevis|... 32 9.9
UniRef50_Q5KYU9 Cluster: Hypothetical conserved protein; n=1; Ge... 32 9.9
UniRef50_Q2JF32 Cluster: Putative uncharacterized protein; n=3; ... 32 9.9
UniRef50_A3XWB4 Cluster: Putative uncharacterized protein; n=3; ... 32 9.9
>UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212;
Eukaryota|Rep: 60S ribosomal protein L10a - Homo sapiens
(Human)
Length = 217
Score = 265 bits (649), Expect = 7e-70
Identities = 128/193 (66%), Positives = 143/193 (74%)
Frame = +3
Query: 51 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 230
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 231 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 410
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 411 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 590
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELV 180
Query: 591 QNVHLSINFLVSL 629
N+HL++NFLVSL
Sbjct: 181 YNIHLAVNFLVSL 193
>UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 238
Score = 198 bits (482), Expect = 1e-49
Identities = 102/213 (47%), Positives = 134/213 (62%), Gaps = 22/213 (10%)
Frame = +3
Query: 57 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 236
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 237 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 416
M+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 417 LLGPGLNKA----------------------GKFPGLLSHQESMTQKIDEVKGTIKFQMK 530
LLGPGLNKA GKFP L++HQES+ K++E K T+KFQ+K
Sbjct: 122 LLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQLK 181
Query: 531 KVLCLSVAVGHVDMTPDELAQNVHLSINFLVSL 629
KVLC+ VAVG+ M ++ QNV +S+NFLVSL
Sbjct: 182 KVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSL 214
>UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8;
Ascomycota|Rep: 60S ribosomal protein L10a - Candida
albicans (Yeast)
Length = 217
Score = 190 bits (463), Expect = 2e-47
Identities = 97/192 (50%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
Frame = +3
Query: 57 SKVSRDTLYECVNAVLQ-SSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 233
SK++ + E V+ +L+ S++ KKRNFLETVELQ+GLKNYDPQ+DKRFSGT+KL +PRP
Sbjct: 2 SKITSSGVREYVHKLLEYSTETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPQVPRP 61
Query: 234 KMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIP 413
M C+ GD D AK+L V M SE LIKQIP
Sbjct: 62 NMTTCIFGDAFDFDRAKSLGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQIP 121
Query: 414 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQ 593
RLLG L+KAG+FP +SH + + K+ +VK TIKFQ+KKVLCL+VAVG+VDM D L
Sbjct: 122 RLLGRTLSKAGQFPTPVSHNDDLYSKVTDVKSTIKFQLKKVLCLAVAVGNVDMEEDVLVN 181
Query: 594 NVHLSINFLVSL 629
+ ++ NFLVSL
Sbjct: 182 QIMMAANFLVSL 193
>UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal
protein L10a; n=2; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 268
Score = 162 bits (394), Expect = 5e-39
Identities = 83/162 (51%), Positives = 102/162 (62%)
Frame = +3
Query: 144 VELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXX 323
V LQI L+N D Q D+RFSGT++LK+ PR K +CVLGDQQHCDEAK + +P M
Sbjct: 13 VLLQISLQNSDSQTDRRFSGTIRLKFTPRLKFSICVLGDQQHCDEAKAVVIPRMNTEALK 72
Query: 324 XXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEV 503
ESL+ QI LGP LNKAGKFP +H +++ K+D+V
Sbjct: 73 KLNKNKKLFKKLAKKFDAFLALESLVLQI---LGPDLNKAGKFPSSKTHVKNIVAKMDDV 129
Query: 504 KGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSL 629
K IK Q+KKVLCL VAVGHV MT DEL N+ L++NFLVSL
Sbjct: 130 KFMIKLQIKKVLCLPVAVGHVKMTDDELVYNIQLAVNFLVSL 171
>UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins
containing protein; n=9; Eukaryota|Rep: L1P family of
ribosomal proteins containing protein - Tetrahymena
thermophila SB210
Length = 215
Score = 158 bits (383), Expect = 1e-37
Identities = 76/191 (39%), Positives = 119/191 (62%)
Frame = +3
Query: 57 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 236
SK+S + L + +L S KKR F ETVELQIGL++Y+P KDKRF+G++KL +P P
Sbjct: 2 SKISSEFLKNTITQML--SDRKKREFTETVELQIGLRDYNPDKDKRFTGSIKLPNMPYPN 59
Query: 237 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 416
++ ++G +HC+EAK + C+ SE+L+KQ+P+
Sbjct: 60 KKIAIIGTMRHCEEAKAAGIACIDTEGLKKFNKEPKLIKKWFKPYDTLLCSETLMKQLPK 119
Query: 417 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 596
L G L+K GKFP ++ ES+ K+ E++ T++FQ+KKV+CL+ AV +T +++ QN
Sbjct: 120 LCGNVLSKIGKFPISITEGESVVAKVKELQSTVRFQLKKVVCLATAVATDALTEEQIRQN 179
Query: 597 VHLSINFLVSL 629
+++S+NFLVSL
Sbjct: 180 INMSLNFLVSL 190
>UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 303
Score = 144 bits (350), Expect = 1e-33
Identities = 76/149 (51%), Positives = 91/149 (61%)
Frame = +3
Query: 6 LQLPSVVIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK 185
L+L V++ G ++ + S T VL ++ K+R FLETVELQI LKNYDPQK
Sbjct: 152 LELEGVMLRGVSQSEKDTAKSPATPCRRRYEVLHGNQRKRRKFLETVELQITLKNYDPQK 211
Query: 186 DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXX 365
DKRFSGTV+LK P PK VCV+GDQQHCDEAK +++P M
Sbjct: 212 DKRFSGTVRLKSTPCPKFSVCVVGDQQHCDEAKAVDIPHMDIEMLKKLNKNKKLVKKLAK 271
Query: 366 XXXXXXXSESLIKQIPRLLGPGLNKAGKF 452
SESLIKQIPR+LGPGLNKAGKF
Sbjct: 272 KYDAFLASESLIKQIPRILGPGLNKAGKF 300
>UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_253,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 144 bits (350), Expect = 1e-33
Identities = 77/191 (40%), Positives = 113/191 (59%)
Frame = +3
Query: 57 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 236
SK+ + L + ++ +L ++ KKRNF ET ELQI L++YD QKDKRF G+ +L + P P
Sbjct: 26 SKLQGEQLKKYIHEML--TERKKRNFKETTELQIQLRDYDVQKDKRFQGSTRLLHAPYPN 83
Query: 237 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 416
+++ V+G+ HCD+AK L + + SESL+K IPR
Sbjct: 84 IKIGVIGNLTHCDQAKALGLTAIDQDGLKKFNKEKKPIKKWCKPFDILIASESLMKVIPR 143
Query: 417 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 596
L+G K GKFP + ES++ K++EVK ++KFQ+K L L A G +M+ D+L QN
Sbjct: 144 LVGNVFTKIGKFPIAIPETESVSSKVNEVKSSVKFQLKNTLSLGTAFGTDEMSEDQLRQN 203
Query: 597 VHLSINFLVSL 629
+ +INFLVSL
Sbjct: 204 LSTTINFLVSL 214
>UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-prov
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Rpl10a-prov
protein, partial - Strongylocentrotus purpuratus
Length = 155
Score = 134 bits (324), Expect = 2e-30
Identities = 59/82 (71%), Positives = 67/82 (81%)
Frame = +3
Query: 60 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 239
KVSRD LYE V V SK+KKR FLET+ELQ+ LKNYDPQKDKRFSGTVKL++IPRPK
Sbjct: 1 KVSRDLLYEAVKEVQNGSKEKKRKFLETIELQVNLKNYDPQKDKRFSGTVKLRHIPRPKF 60
Query: 240 QVCVLGDQQHCDEAKTLNVPCM 305
+C+LGDQQH DEAK +PCM
Sbjct: 61 SMCILGDQQHLDEAKANGIPCM 82
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +3
Query: 525 MKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSL 629
+KKVLCL+VAVGHV+M ++L N++L+INFLVSL
Sbjct: 97 VKKVLCLAVAVGHVEMDEEDLVSNINLAINFLVSL 131
>UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L10a - Trichomonas
vaginalis G3
Length = 215
Score = 128 bits (310), Expect = 8e-29
Identities = 63/187 (33%), Positives = 109/187 (58%)
Frame = +3
Query: 69 RDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVC 248
++TL + + VL+ +K KKR FLETV++Q+ LK Y+ KDKRF G++KL +I RP +++
Sbjct: 6 QETLQKAIKDVLEGAKTKKRGFLETVDIQLKLKGYNVSKDKRFVGSIKLPHIIRPNVRIG 65
Query: 249 VLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP 428
VLG++ HC+EA+ LN+P S +I Q+ ++LG
Sbjct: 66 VLGNKVHCEEAQKLNIPAYDLPTLTNFNKEKKVVKAWTKRHHLFLASPDVIGQVNKVLGQ 125
Query: 429 GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLS 608
+A KFP + +++ + +DEVK T ++KK + + +G+V+MT ++ +N+ L
Sbjct: 126 VYTRANKFPTNIK-TDTVAKVVDEVKRTANIRLKKSVAFGIPIGNVNMTERQVFENLTLC 184
Query: 609 INFLVSL 629
N++V+L
Sbjct: 185 TNYVVTL 191
>UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia
intestinalis|Rep: Ribosomal protein L10a - Giardia
lamblia (Giardia intestinalis)
Length = 221
Score = 122 bits (295), Expect = 5e-27
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Frame = +3
Query: 60 KVSRDTLYECVNAVLQ-SSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 236
+++ + L + + +++ ++ +K R FLETVELQ+GLK YDP+KD RF+ + L +I +
Sbjct: 7 RINPEALNKHIAEIIERATNEKPRKFLETVELQVGLKGYDPKKDPRFNLPLVLPHIAKQN 66
Query: 237 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 416
+++CV+ D + D AK L + + S+SLI+QI
Sbjct: 67 LKLCVIADARDADRAKKLGLNYVEIEHLQQFNKDAKQIKKFAKSYDVFLASKSLIRQITV 126
Query: 417 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 596
GPG KAG+ P L+ E + K+ E K TIK Q KK + L+ +G+V M E+AQN
Sbjct: 127 YAGPGFTKAGRTPLPLAPDEDLELKVLECKSTIKVQFKKAVGLNWPIGNVKMPASEIAQN 186
Query: 597 VHLSINFLVS 626
+ ++NFL +
Sbjct: 187 IMTTLNFLAT 196
>UniRef50_Q01AT5 Cluster: Chromosome 04 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 04 contig 1, DNA
sequence - Ostreococcus tauri
Length = 175
Score = 120 bits (290), Expect = 2e-26
Identities = 68/151 (45%), Positives = 79/151 (52%)
Frame = -2
Query: 625 DTRKLMERCTF*ASSSGVMSTWPTATERHSTFFIWNLMVPLTSSIFCVMDSWWERRPGNL 446
+T+KL + +S V+S WPTAT + TF WNL+ LTS I DS GNL
Sbjct: 25 ETKKLTDIWMLMNNSFSVISMWPTATAKQRTFLSWNLIWDLTSLILLSRDSLCVASVGNL 84
Query: 445 PALFKPGPNKRGICLISDSDARKXXXXXXXXXXXXXXXXXXXXXXXSIHGTFKVLASSQC 266
PALFKPGP +RGICLI+DSDARK S+ ASSQC
Sbjct: 85 PALFKPGPKRRGICLITDSDARKCWYFFASFLMSFLFLLSFLSASTSMESMPLPAASSQC 144
Query: 265 CWSPRTQTCIFGRGMYFSFTVPEKRLSFCGS 173
SP FGRG+ TVP KRLSFCGS
Sbjct: 145 LASPSMHILSFGRGITGRLTVPLKRLSFCGS 175
>UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L10a - Entamoeba
histolytica
Length = 165
Score = 120 bits (290), Expect = 2e-26
Identities = 68/171 (39%), Positives = 94/171 (54%)
Frame = +3
Query: 54 SSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 233
SS VSR + V +L+ K++K F ET EL + LKNYDP KDKR GT KL + +
Sbjct: 1 SSAVSR----QGVATILKEKKERK--FGETGELHLALKNYDPDKDKRCGGTDKLPNVTKA 54
Query: 234 KMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIP 413
+VCVLGD Q C+ A+ N+P M S+S+ +Q+
Sbjct: 55 NYKVCVLGDAQACEAAQKENIPHMDVDALKALYKDKMFFKKLARKYNTFLGSDSVGRQLQ 114
Query: 414 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 566
++LGPGLNK GKFP L E + KI+E++ + Q+KKVLC+ V G+V
Sbjct: 115 KILGPGLNKGGKFPPPLGKNEDLKVKINELQCQVNSQLKKVLCMGVGGGNV 165
>UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 205
Score = 112 bits (269), Expect = 8e-24
Identities = 49/73 (67%), Positives = 61/73 (83%)
Frame = +3
Query: 411 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELA 590
P++L PGLNKAGKFP LL+H E+M K+DEVK TIKFQMK +LCL+VA+G + MT DEL
Sbjct: 110 PQILDPGLNKAGKFPSLLTHSENMVAKVDEVKSTIKFQMKNMLCLAVAIGPMKMTDDELV 169
Query: 591 QNVHLSINFLVSL 629
N+HL++NFLVSL
Sbjct: 170 YNIHLAVNFLVSL 182
Score = 53.2 bits (122), Expect = 5e-06
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 51 MSSKVSRDTLYEC-VNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 227
M +K S +C V VLQ ++ K LE VELQI LK YD KD+ F GT++LK P
Sbjct: 25 MGAKKSLRQQCDCGVREVLQGNQPKNWQCLERVELQISLKKYDAVKDRHFLGTIRLKSTP 84
Query: 228 RP 233
P
Sbjct: 85 SP 86
>UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiella
natans|Rep: Ribosomal protein 10a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 216
Score = 111 bits (267), Expect = 1e-23
Identities = 60/171 (35%), Positives = 91/171 (53%)
Frame = +3
Query: 117 DKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNV 296
+KKRNF+E VEL LK+ + +K K+ SG VKL + PR +++C+L DQ+H EAK L +
Sbjct: 22 NKKRNFIEKVELNFSLKSINFKKHKKISGGVKLPFGPRRAVKICMLADQRHITEAKNLGL 81
Query: 297 PCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFPGLLSHQE 476
+ SESLIK IPR LGP L K GKFP ++
Sbjct: 82 YYLDINQIKLLKNKKKVLKKLVKKFEVFIASESLIKIIPRYLGPALAKVGKFPFSITSTI 141
Query: 477 SMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSL 629
+T++I + +K +K V VG + M +++ +N + ++FL+SL
Sbjct: 142 PITEQIKLILKEVKINFRKNFSTGVVVGDLRMAQEKVTENAKIVVSFLISL 192
>UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal
protein L10a isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a isoform 4 -
Canis familiaris
Length = 105
Score = 93.5 bits (222), Expect = 4e-18
Identities = 49/90 (54%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +3
Query: 51 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKL-KYIP 227
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+L + P
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLAPFCP 60
Query: 228 RPKMQVCVLGDQQHCD-----EAKTLNVPC 302
P ++ G + A+ + PC
Sbjct: 61 HPALRALPPGPPVELEAGGHGRARAVQTPC 90
>UniRef50_UPI0000F33BDC Cluster: UPI0000F33BDC related cluster; n=1;
Bos taurus|Rep: UPI0000F33BDC UniRef100 entry - Bos
Taurus
Length = 172
Score = 89.4 bits (212), Expect = 6e-17
Identities = 63/165 (38%), Positives = 86/165 (52%)
Frame = -1
Query: 629 Q*HKEVDGKMHILSKLIRSHVHMANCYRKTQHLLHLELNGSLDFINLLRHGLLVGEKTRE 450
Q H+E D ++ LI +AN + +TQHLLHLEL+G L IN L+VG++ RE
Sbjct: 15 QGHQEDD----VVHNLIICRRQVANSHCQTQHLLHLELDGGLHLINFGHRVLIVGQQGRE 70
Query: 449 FTSFVQTGTQQTGNLLDQ*L*CQESIKFFGQFLDKLFVLIQFFQSLSIHTWHIQGFSLVT 270
VQ Q + +LLDQ L ++ I GQ LD+ VL++F Q H I T
Sbjct: 71 LARLVQAWAQDSWDLLDQRLGSRKGIILLGQLLDQFLVLVEFPQ---CHVGDIHSLGFFT 127
Query: 269 MLLVSKNANLHFRPRYVF*LYSAGETLVLLWVIVLQTNLKLYSLQ 135
+LLV ++ + F A E VLL VI LQ +LK + LQ
Sbjct: 128 VLLVPQDTHGEFGAGSGLKPDGAQEIFVLLRVIGLQADLKHHHLQ 172
>UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;
n=1; Ostreococcus tauri|Rep: RL10A_CHLRE 60S ribosomal
protein L10a - Ostreococcus tauri
Length = 134
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = +3
Query: 54 SSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 233
S K++ DTL E V+ +L+ SK+K R F+ETVELQIGLKNYDPQKDKRF+GTV L IPRP
Sbjct: 74 SGKLNTDTLKEGVSFILEKSKEKPRKFVETVELQIGLKNYDPQKDKRFNGTVNLPVIPRP 133
>UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1;
Antonospora locustae|Rep: 60S ribosomal protein L10a -
Antonospora locustae (Nosema locustae)
Length = 211
Score = 62.5 bits (145), Expect = 8e-09
Identities = 41/164 (25%), Positives = 77/164 (46%)
Frame = +3
Query: 138 ETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXX 317
ET+E+Q+ LK YD ++DK+F G+V L + R +V V+GD+ + AK +P +
Sbjct: 25 ETMEVQVCLKGYDLKRDKKFDGSVVLPFQKRKNERVLVVGDRNLEEMAKEAGLPFVLYDD 84
Query: 318 XXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKID 497
+ + + + K F + ++ + D
Sbjct: 85 VAGKTKEKKTMKKKFAENYHAVITTNTFHKYFEIAFLN-RKRTPFYIFDPNGGNLKKFHD 143
Query: 498 EVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSL 629
EV T+KF++++ +S VG ++M P E++QN+ ++FL +L
Sbjct: 144 EVLRTVKFKLRQTNVVSFPVGTLEMNPAEISQNIRTGLDFLFTL 187
>UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5;
Sulfolobaceae|Rep: 50S ribosomal protein L1P -
Sulfolobus tokodaii
Length = 222
Score = 59.7 bits (138), Expect = 6e-08
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 2/185 (1%)
Frame = +3
Query: 66 SRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK-RFSGTVKLKYIPRPKMQ 242
S+D+L E + L + KRNF ++VEL + K D +K + + V L P +
Sbjct: 7 SKDSLVEALKVALNPENNPKRNFTQSVELIVTFKGIDMKKGELKLREIVPLPKEPSKPRK 66
Query: 243 VCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXX-XXXSESLIKQIPRL 419
V V+ Q + AK + ++ + + R+
Sbjct: 67 VLVIPAFQQIESAKKAEPNVLLTKEELQKLQGQKRAIKKLARQNDWFLVAQDSMALVGRI 126
Query: 420 LGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 599
LGP L GKFP L + +T+ I K + + K + V +G DM P++LA+N
Sbjct: 127 LGPALGPRGKFPTPLPNAADITEYILRFKRSTLVKTKDQPHVQVFIGTEDMKPEDLAENA 186
Query: 600 HLSIN 614
+N
Sbjct: 187 LAVLN 191
>UniRef50_A7D0Q4 Cluster: Ribosomal protein L1; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L1 -
Halorubrum lacusprofundi ATCC 49239
Length = 238
Score = 53.6 bits (123), Expect = 4e-06
Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 1/184 (0%)
Frame = +3
Query: 72 DTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYD-PQKDKRFSGTVKLKYIPRPKMQVC 248
DT+ E V L + + RNF ETV++ I L++ D R +V L + Q+
Sbjct: 29 DTIQEAVTLALDDAPE--RNFRETVDIAINLRDLDLNDPSNRIDESVVLPAGTGQETQIV 86
Query: 249 VLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP 428
V + + A+ + + +L++ I R LG
Sbjct: 87 VFAEGETAVRAQEVADQVLDSDDLEDLGDDDDRAKDLADETDFFVAEANLMQDIGRYLGT 146
Query: 429 GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLS 608
L GK P L + + ++ +K T++ + + VG DM PD ++ N+ +
Sbjct: 147 VLGPRGKMPTPLQPDDDIVDTVNRMKNTVQLRSRDRRTFHTRVGAEDMGPDAISDNIDVI 206
Query: 609 INFL 620
I L
Sbjct: 207 IRRL 210
>UniRef50_Q8PY52 Cluster: 50S ribosomal protein L1P; n=7;
Archaea|Rep: 50S ribosomal protein L1P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 213
Score = 50.8 bits (116), Expect = 3e-05
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 2/177 (1%)
Frame = +3
Query: 75 TLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK-RFSGTVKLKYIPRPKMQVCV 251
T+ E V V++ S KRNF E+V+L I LKN D + K R V L + ++++ V
Sbjct: 5 TILEAVKKVIEESP--KRNFSESVDLAINLKNLDMNQPKNRVDEEVILPHGLGKELKIGV 62
Query: 252 LGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSES-LIKQIPRLLGP 428
AK + +E+ + I + LG
Sbjct: 63 FAKGDVGLRAKAAGAAYVISDVELEELAADKNKARVLANECDLFIAETQFMPIIGKNLGI 122
Query: 429 GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 599
L GK P L + + + I + +K + K L VAVG +M PD+L++N+
Sbjct: 123 VLGPRGKMPIPLMPNKDIGELIQSKQNAVKLRSKDRLTFHVAVGRRNMNPDDLSENI 179
>UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza
sativa|Rep: Ribosomal protein L1 - Oryza sativa subsp.
japonica (Rice)
Length = 392
Score = 49.6 bits (113), Expect = 6e-05
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 2/194 (1%)
Frame = +3
Query: 48 KMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYI 224
K KV+ D L + + + S+ +KKRNF ETVE + L DP++ D+ G + L +
Sbjct: 177 KRPQKVAID-LVDAIREIKTSANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHG 234
Query: 225 PRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIK 404
++V V + DEA+ + L K
Sbjct: 235 TGKTVRVAVFAEGPAADEARAAGADVVGGDELIEEIRTGGGKLSFDKCIATPMYMPRLSK 294
Query: 405 QIPRLLGP-GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPD 581
+ R+LGP GL K G +++ S K + G + F++ K + V +G ++ + +
Sbjct: 295 -VARILGPRGLMPNPKL-GSVTNDVSGAVKAAK-SGRVDFKIDKTAIVHVGLGKINFSDE 351
Query: 582 ELAQNVHLSINFLV 623
L +N+ ++ L+
Sbjct: 352 NLRENIGAFVHALL 365
>UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3;
Archaea|Rep: 50S ribosomal protein L1P - Archaeoglobus
fulgidus
Length = 215
Score = 49.6 bits (113), Expect = 6e-05
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 3/181 (1%)
Frame = +3
Query: 63 VSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKY-IPRPK 236
V +D L + + +++ K KR F+ETVE+ + L+N D +K + R V L + + +P+
Sbjct: 3 VDKDKLVKSIEEAIKNGK--KRRFVETVEMAVNLRNVDMKKPENRIDTVVNLPHGLGKPR 60
Query: 237 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSES-LIKQIP 413
++ V +AK + +E+ L+ +I
Sbjct: 61 -KIGVFAKGDTALKAKEAGADVVITPEEIDELAKDKRRAKKLANSIDFFIAEAPLMPEIG 119
Query: 414 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQ 593
R LGP L GK P + ID ++ ++K + + +G +M +++A+
Sbjct: 120 RKLGPVLGPRGKIPQPIPPLADPKPFIDRLRNSVKIRTRDKTTFHAPIGSENMDVEKIAE 179
Query: 594 N 596
N
Sbjct: 180 N 180
>UniRef50_Q8SRY5 Cluster: 60S RIBOSOMAL PROTEIN L10A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L10A
- Encephalitozoon cuniculi
Length = 219
Score = 48.0 bits (109), Expect = 2e-04
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 2/177 (1%)
Frame = +3
Query: 102 LQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEA 281
L+ S+D ++ + T+++Q+ LK +DP+KD + S + L Y R + V+ D+ H
Sbjct: 25 LKESEDPEK--IVTIQIQVNLKGFDPRKDNKVSKDMVLPYRVRSLDKTIVIADEAHVKVC 82
Query: 282 KTLNVPCM-XXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFPG 458
N+P + + I Q+ +L + GK P
Sbjct: 83 IDANLPYVPIDEISGDDKKDIRESVLKKNKFFILCPGYNKIYQLKNIL-----RCGKTPH 137
Query: 459 LLSHQESMTQKIDEVKGTIKFQMKKVLCL-SVAVGHVDMTPDELAQNVHLSINFLVS 626
+L + + + + K + K +++ + S VGH M + + +N+ + + LVS
Sbjct: 138 ILRNGDDINAVFETGKKSCKLRIQDDFSVTSFTVGHTGMDSEHIYENIKVGMGLLVS 194
>UniRef50_Q9Y9W6 Cluster: 50S ribosomal protein L1P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L1P - Aeropyrum pernix
Length = 217
Score = 46.8 bits (106), Expect = 4e-04
Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 1/183 (0%)
Frame = +3
Query: 51 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK-RFSGTVKLKYIP 227
MS + ++ E ++ L+ + K+ F ++VE+ + LK+ D + + R TV L P
Sbjct: 1 MSQETVLASIEEAIDKSLKLGRGKR--FKQSVEIIVALKDIDLKSPQARIRETVFLPNRP 58
Query: 228 RPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQ 407
+ +VCV+ +AK V + L+
Sbjct: 59 PKEAKVCVVAHGDMELQAKEAGVEVLNRQDLQNLSQNKREVKKLARRCYWVLVRADLMGL 118
Query: 408 IPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDEL 587
R+LGP L GK P + ++ I+ K + +++ + +G DM+P EL
Sbjct: 119 AGRILGPALGPRGKAPVPVPPNANIKDLIERYKAAVWVRIRNQPQVMARIGTEDMSPREL 178
Query: 588 AQN 596
A+N
Sbjct: 179 AEN 181
>UniRef50_Q97BN2 Cluster: 50S ribosomal protein L1P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L1P -
Thermoplasma volcanium
Length = 217
Score = 45.2 bits (102), Expect = 0.001
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 1/178 (0%)
Frame = +3
Query: 84 ECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK-RFSGTVKLKYIPRPKMQVCVLGD 260
+ V AV QSS +K F E+VE+ I LK+ D K R + + L ++V + G
Sbjct: 8 KAVEAVKQSSPQRK--FEESVEIAINLKDIDMTNPKNRINEEILLPNGRGKDVKVVIFGS 65
Query: 261 QQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNK 440
++ +AK + +L+ I + LG L
Sbjct: 66 EELKAKAKGVADYIFGPEDISKFAEDKKAFKKIVNDAYFFIAEATLMANIGKSLGQVLGP 125
Query: 441 AGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSIN 614
GK P + + I +K T+K + + L L V VG M ++++N+ +N
Sbjct: 126 RGKMPRPIPPGQDPVPLIKALKNTVKARSRNSLTLHVPVGTRSMDTQKISENIMAILN 183
>UniRef50_P13575 Cluster: 50S ribosomal protein L1P; n=5;
Euryarchaeota|Rep: 50S ribosomal protein L1P -
Halobacterium salinarium (Halobacterium halobium)
Length = 212
Score = 44.4 bits (100), Expect = 0.002
Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 2/170 (1%)
Frame = +3
Query: 96 AVLQSSKDK-KRNFLETVELQIGLKNYD-PQKDKRFSGTVKLKYIPRPKMQVCVLGDQQH 269
AV ++ +D +RNF ETV+L + L++ D +R V L + Q+ V D +
Sbjct: 9 AVARALEDAPQRNFRETVDLAVNLRDLDLNDPSQRVDEGVVLPSGTGQETQIVVFADGET 68
Query: 270 CDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGK 449
A + + +++ I LG L GK
Sbjct: 69 AVRADDVADDVLDEDDLSDLADDTDAAKDLADETDFFVAEAPMMQDIAGALGQVLGPRGK 128
Query: 450 FPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 599
P L + + ++ +K T++ + + VG DM+ +++A N+
Sbjct: 129 MPTPLQPDDDVVDTVNRMKNTVQIRSRDRRTFHTRVGAEDMSAEDIASNI 178
>UniRef50_O27716 Cluster: 50S ribosomal protein L1P; n=3;
Methanobacteriaceae|Rep: 50S ribosomal protein L1P -
Methanobacterium thermoautotrophicum
Length = 224
Score = 41.1 bits (92), Expect = 0.021
Identities = 33/175 (18%), Positives = 76/175 (43%), Gaps = 3/175 (1%)
Frame = +3
Query: 84 ECVNAVLQSSK-DKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLG 257
E + AV ++ + + RNF +++++ + +K+ D K + RF V L +++ V+
Sbjct: 16 EIMEAVKKAKELSRPRNFTQSMDVILNIKDLDVNKPENRFDEEVSLPNGRGKDVKIAVIA 75
Query: 258 DQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSES-LIKQIPRLLGPGL 434
D + +AK + +++ ++ + R +GP L
Sbjct: 76 DGELALQAKNAGADLVITKDELEELGKNRKEAKKLANQYEFFVAQADMMPLVGRFMGPVL 135
Query: 435 NKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 599
K P + + +++++ T+K ++K + VG DM ++LA+N+
Sbjct: 136 GPRKKMPKPVPATINPEPILNKLRDTVKVRIKDQPVVHTVVGTEDMDDEKLAENI 190
>UniRef50_Q5CLP4 Cluster: At2g42650/F14N22.8; n=2;
Cryptosporidium|Rep: At2g42650/F14N22.8 -
Cryptosporidium hominis
Length = 250
Score = 39.9 bits (89), Expect = 0.049
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 390 ESLIKQIPRLLGPGLNKAGKFPGLLSHQES-MTQKIDEVKGTIKFQMKKVLCLSVAVGHV 566
+ +I+++P+LLG KA K P + +ES ++ + +KK C+ + V V
Sbjct: 137 DRIIEKMPKLLGSYFIKANKMPIAIKIRESNFKNSLESALSSTFMSIKKGKCIGIRVARV 196
Query: 567 DMTPDELAQNV 599
DM ++ QN+
Sbjct: 197 DMNTKQVVQNL 207
>UniRef50_Q9ZE23 Cluster: 50S ribosomal protein L1; n=7;
Bacteria|Rep: 50S ribosomal protein L1 - Rickettsia
prowazekii
Length = 238
Score = 37.5 bits (83), Expect = 0.26
Identities = 43/202 (21%), Positives = 79/202 (39%), Gaps = 2/202 (0%)
Frame = +3
Query: 24 VIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQ-KDKRFS 200
+ G + KV DTLY NAV Q F T+E+ + L DP+ D+
Sbjct: 10 ISGSKKIREAREKVKSDTLYNLTNAVAQLKSASYVKFDPTLEIVMKL-GIDPRHSDQIVR 68
Query: 201 GTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXX 380
G V L ++V V+ ++ +EAK+ +
Sbjct: 69 GVVNLPAGTGKTIRVAVICKEEREEEAKSAGADLVGSINIIDEIKAGQINFDVCIATPDM 128
Query: 381 XXSESLIKQIPRLLGP-GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAV 557
S+I + R+LGP GL K G ++ K + G ++++ +K + +
Sbjct: 129 M---SMISSVARILGPKGLMPNPKL-GTVTLDIKNAIK-NAKSGQVEYRAEKAGIIHAGL 183
Query: 558 GHVDMTPDELAQNVHLSINFLV 623
G + + +L +N++ I ++
Sbjct: 184 GKLSFSDQDLLKNLNAFIGAVI 205
>UniRef50_Q00XM9 Cluster: LSU ribosomal protein L1P; n=1;
Ostreococcus tauri|Rep: LSU ribosomal protein L1P -
Ostreococcus tauri
Length = 304
Score = 37.1 bits (82), Expect = 0.35
Identities = 33/162 (20%), Positives = 68/162 (41%), Gaps = 2/162 (1%)
Frame = +3
Query: 120 KKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNV 296
K F+E+VEL + L DP++ D G V+L ++V + + + A+
Sbjct: 93 KSERFVESVELAVHL-GVDPKRSDMIVRGAVRLPNGTGKTVRVAAFAEGESAEAARAAGA 151
Query: 297 PCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP-GLNKAGKFPGLLSHQ 473
+ S +K++ R+LGP GL K G ++ +
Sbjct: 152 SVVGGAELVDAIKEGGSGAIDFDKAVATPGMMSKLKEVARVLGPRGLMPNPKV-GTVTTE 210
Query: 474 ESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 599
+ + +++ G ++F+ +K + VG V+ ++L +N+
Sbjct: 211 IAEAVR-EQLGGRVEFRAEKNAIVHTMVGKVNFEDEQLVENI 251
>UniRef50_Q92J89 Cluster: 50S ribosomal protein L1; n=8;
Alphaproteobacteria|Rep: 50S ribosomal protein L1 -
Rickettsia conorii
Length = 239
Score = 35.5 bits (78), Expect = 1.1
Identities = 40/201 (19%), Positives = 76/201 (37%), Gaps = 1/201 (0%)
Frame = +3
Query: 24 VIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSG 203
+ GG + KV DTLY NAV + F T+E+ + L D+ G
Sbjct: 11 ISGGKKIREAREKVKSDTLYNLTNAVERLKSASYVKFDPTLEIVMKLGIDSRHSDQMVRG 70
Query: 204 TVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXX 383
V L ++V V+ ++ +EAK+ +
Sbjct: 71 VVNLPAGTGKTVRVAVICKEEREEEAKSAGADLVGSTNIIDEIKAGKINFDVCIATPDMM 130
Query: 384 XSESLIKQIPRLLGP-GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVG 560
+ I + R+LGP GL K G ++ K + G ++++ +K + +G
Sbjct: 131 AA---IGSVARILGPKGLMPNPKL-GTVTLDIKNAIK-NAKSGQVEYRAEKAGIIHAGLG 185
Query: 561 HVDMTPDELAQNVHLSINFLV 623
+ + +L +N++ I ++
Sbjct: 186 KLSFSDQDLLKNLNAFIEAVI 206
>UniRef50_Q0AYI8 Cluster: Translation initiation factor IF-2; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Translation initiation factor IF-2 - Syntrophomonas
wolfei subsp. wolfei (strain Goettingen)
Length = 882
Score = 35.1 bits (77), Expect = 1.4
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 18 SVVIGGSLTNKMSSKVSRD--TLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK 191
S VI G + S +V RD +YE + L+ KD + +E E IG+K+++ K+
Sbjct: 808 SYVIDGKIQRNASVRVLRDGVIVYEGQLSSLKRFKDDAKEVVENYECGIGIKDFNDVKEG 867
Query: 192 RFSGTVKLKYIPR 230
L+ IPR
Sbjct: 868 DIIEAYTLEEIPR 880
>UniRef50_A2Y3N8 Cluster: DNA primase; n=4; Oryza sativa|Rep: DNA
primase - Oryza sativa subsp. indica (Rice)
Length = 397
Score = 35.1 bits (77), Expect = 1.4
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +3
Query: 33 GSLTNKMSSKVSRDTLYECVNAVLQSSKDKK-RNFLETVELQIGLKNYDPQKDKRFSGTV 209
G+ + +S + T +E + + LQS K K R +E + D + K + +
Sbjct: 242 GNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLL 301
Query: 210 KLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 305
K + PK +VCV D +CD+ VP +
Sbjct: 302 KAPFCIHPKTGRVCVPIDPNNCDDFDPTTVPTL 334
>UniRef50_UPI0000ECD0EF Cluster: CDNA FLJ31980 fis, clone
NT2RP7008487, weakly similar to TRICHOHYALIN.; n=3;
Amniota|Rep: CDNA FLJ31980 fis, clone NT2RP7008487,
weakly similar to TRICHOHYALIN. - Gallus gallus
Length = 955
Score = 33.5 bits (73), Expect = 4.3
Identities = 23/99 (23%), Positives = 47/99 (47%)
Frame = +3
Query: 9 QLPSVVIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKD 188
QL +V SL K++ ++ + +Q KDK+ L+ +ELQ+ + + Q++
Sbjct: 322 QLAILVERDSLNQKLNERIFEKKQQQETLIYMQGEKDKELRNLKKMELQMKMIHESLQQE 381
Query: 189 KRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 305
K T+KL+ PK+ +L ++ + + C+
Sbjct: 382 KSQHKTLKLEAEAIPKINGVLLERRRELQKEIEMKKRCL 420
>UniRef50_Q9FJ26 Cluster: DNA primase; n=1; Arabidopsis
thaliana|Rep: DNA primase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 407
Score = 33.5 bits (73), Expect = 4.3
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +3
Query: 36 SLTNKMSSKVSRDTLYECVNAVLQSSKDKK---RNFLETVELQIGLKNYDPQKDKRFSGT 206
S + +S + + +E + LQS ++K R +E + D + K+ +
Sbjct: 275 SARSSLSEEATSLLRWEQLKKALQSKRNKALSLRTCVEEIVFTFTYPRIDLEVSKQMNHL 334
Query: 207 VKLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 305
+K + PK +VCV D +CDE L VP +
Sbjct: 335 LKAPFCVHPKTGRVCVPIDPNNCDEFDPLAVPTL 368
>UniRef50_A4R562 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1430
Score = 33.5 bits (73), Expect = 4.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 489 SASWTPGGREDQGIYQLCSNRDPTNGESA*SVTLM 385
+A+W PGG DQ + + + DP N +A T++
Sbjct: 422 TATWQPGGAHDQQVLDILKDIDPVNARAAMDTTML 456
>UniRef50_Q5QZU9 Cluster: Methyl-accepting chemotaxis protein; n=1;
Idiomarina loihiensis|Rep: Methyl-accepting chemotaxis
protein - Idiomarina loihiensis
Length = 663
Score = 33.1 bits (72), Expect = 5.7
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = -1
Query: 206 SAGETLVLLWVIVLQTNLKLYSLQKVTFLVLRGLKNGIHALVERV 72
+A ETL LW++V+ + + ++ +TF +L+G+ + + L+E +
Sbjct: 301 TASETLSQLWLLVILISAFILAIVVLTFFILKGIYSQVRELLEGI 345
>UniRef50_Q3KPN0 Cluster: LOC733385 protein; n=2; Xenopus
laevis|Rep: LOC733385 protein - Xenopus laevis (African
clawed frog)
Length = 446
Score = 32.3 bits (70), Expect = 9.9
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 408 IPRLLGPGLNKAGKFPGLLSHQESMTQKIDE--VKGTIKFQMKKVLCLSVAVGHVDMTPD 581
+P LLG KA + P ++ + + ++GT K C S+ VGH DM D
Sbjct: 152 LPSLLGKHFYKAKREPQSVNLKSKYLAALLNRFIQGTQLHINNKGCCYSIRVGHTDMKVD 211
Query: 582 ELAQN 596
++ +N
Sbjct: 212 DIVEN 216
>UniRef50_Q5KYU9 Cluster: Hypothetical conserved protein; n=1;
Geobacillus kaustophilus|Rep: Hypothetical conserved
protein - Geobacillus kaustophilus
Length = 501
Score = 32.3 bits (70), Expect = 9.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 571 MSTWPTATERHSTFFIWNLMVPLT-SSIFCVMDSWWERRPG 452
M T P A ++ + WNL+VPL+ + + SWW+ R G
Sbjct: 264 MQTCPRAYQKETPVKPWNLIVPLSIVLVLTLFLSWWDGRRG 304
>UniRef50_Q2JF32 Cluster: Putative uncharacterized protein; n=3;
Frankia|Rep: Putative uncharacterized protein - Frankia
sp. (strain CcI3)
Length = 476
Score = 32.3 bits (70), Expect = 9.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 582 HQESCPHGQLLQKDTAPSSFGT*WFP*LHQSSASWTPGGREDQ 454
H + HG+L + D A + FG +FP + W P GR DQ
Sbjct: 164 HNYATVHGELTEIDRAVTLFGRSYFPLVILHDVGW-PAGRRDQ 205
>UniRef50_A3XWB4 Cluster: Putative uncharacterized protein; n=3;
Vibrionales|Rep: Putative uncharacterized protein -
Vibrio sp. MED222
Length = 1130
Score = 32.3 bits (70), Expect = 9.9
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 390 ESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIK 518
+SL PR GL LL + E +TQK DE+K TIK
Sbjct: 179 QSLTAWRPRQAANGLLLTTDVASLLENNEQITQKADELKSTIK 221
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,395,343
Number of Sequences: 1657284
Number of extensions: 12644806
Number of successful extensions: 32612
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 31724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32598
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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