Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k01r
(737 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 136 2e-32
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 136 2e-32
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 136 2e-32
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 130 1e-30
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 130 1e-30
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 85 1e-20
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 86 3e-17
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 64 1e-10
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 64 1e-10
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 64 1e-10
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 64 1e-10
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 64 1e-10
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 64 1e-10
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 62 5e-10
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 62 5e-10
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 56 4e-08
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.006
SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07) 28 6.9
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 136 bits (329), Expect = 2e-32
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = -3
Query: 735 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 556
KM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421
Query: 555 YQQY 544
YQQY
Sbjct: 422 YQQY 425
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 136 bits (329), Expect = 2e-32
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = -3
Query: 735 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 556
KM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 307 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 366
Query: 555 YQQY 544
YQQY
Sbjct: 367 YQQY 370
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 136 bits (329), Expect = 2e-32
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = -3
Query: 735 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 556
KM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE
Sbjct: 362 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421
Query: 555 YQQY 544
YQQY
Sbjct: 422 YQQY 425
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 130 bits (314), Expect = 1e-30
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = -3
Query: 735 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 556
KMAATF+GN+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++E
Sbjct: 127 KMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAE 186
Query: 555 YQQY 544
YQQY
Sbjct: 187 YQQY 190
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 130 bits (314), Expect = 1e-30
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = -3
Query: 735 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 556
KMAATF+GN+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++E
Sbjct: 189 KMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAE 248
Query: 555 YQQY 544
YQQY
Sbjct: 249 YQQY 252
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 85.4 bits (202), Expect(2) = 1e-20
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = -3
Query: 735 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 577
K AATF+ NSTAIQE F+R +EQF AMFRR+AFLHWYT EGMD +EFTE + N
Sbjct: 181 KNAATFLYNSTAIQEAFRRFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
Score = 32.7 bits (71), Expect(2) = 1e-20
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 597 FTEAESNMNDLVSEYQQY 544
+ A+SN+NDL+SEYQQY
Sbjct: 256 YFSADSNLNDLISEYQQY 273
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/63 (60%), Positives = 50/63 (79%)
Frame = -3
Query: 735 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 556
KM+A+ I ++TAIQELFKRI + MFRR+AFLHWYT EGMD +F EA++++ DL+S
Sbjct: 267 KMSASCISSNTAIQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLIST 326
Query: 555 YQQ 547
YQQ
Sbjct: 327 YQQ 329
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 358 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 417
Query: 549 Q 547
+
Sbjct: 418 E 418
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 526 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 585
Query: 549 Q 547
+
Sbjct: 586 E 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 311 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 370
Query: 549 Q 547
+
Sbjct: 371 E 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 745 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 804
Query: 549 Q 547
+
Sbjct: 805 E 805
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 1154 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1213
Query: 549 Q 547
+
Sbjct: 1214 E 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 549 Q 547
+
Sbjct: 434 E 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 359 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 418
Query: 549 Q 547
+
Sbjct: 419 E 419
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 790 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 849
Query: 549 Q 547
+
Sbjct: 850 E 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 339 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 398
Query: 549 Q 547
+
Sbjct: 399 E 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 807 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 866
Query: 549 Q 547
+
Sbjct: 867 E 867
Score = 63.7 bits (148), Expect = 1e-10
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TA+ E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 549 Q 547
+
Sbjct: 434 E 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 959 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1018
Query: 549 Q 547
+
Sbjct: 1019 E 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 299 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 358
Query: 549 Q 547
+
Sbjct: 359 E 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 172 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 231
Query: 549 Q 547
+
Sbjct: 232 E 232
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -3
Query: 729 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 550
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 549 Q 547
+
Sbjct: 434 E 434
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 62.1 bits (144), Expect = 5e-10
Identities = 23/57 (40%), Positives = 41/57 (71%)
Frame = -3
Query: 717 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 547
+ N+TAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 176 LSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 62.1 bits (144), Expect = 5e-10
Identities = 23/57 (40%), Positives = 41/57 (71%)
Frame = -3
Query: 717 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 547
+ N+TAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 76 LSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 132
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 55.6 bits (128), Expect = 4e-08
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = -3
Query: 699 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 547
I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 297 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = -3
Query: 654 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 547
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = -3
Query: 717 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEY 553
+ N++ I+ F + ++F +++RKA +H YT +G++ +F + +++ L+ EY
Sbjct: 415 LANNSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470
>SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07)
Length = 502
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 125 NQVQPYKKKDLFPLCDSVTAPRACSAEGLASLRVAVYCNKHSRAALR 265
+++Q L LC SV+ C+ A L ++C + S A LR
Sbjct: 136 SRLQQLASLSLTDLCQSVSGDEGCAVAETAELIALMHCLESSAATLR 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,265,842
Number of Sequences: 59808
Number of extensions: 320392
Number of successful extensions: 880
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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