Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10k01f
(608 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 330 7e-91
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 325 2e-89
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 318 2e-87
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 206 1e-53
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 4e-51
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 174 4e-44
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 138 2e-33
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 137 8e-33
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 136 2e-32
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 4e-32
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 134 4e-32
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 7e-32
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 107 7e-24
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 6e-22
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 93 2e-19
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 74 8e-14
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 69 2e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 69 3e-12
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 52 5e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 44 7e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 42 5e-04
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.18
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 0.97
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.2
SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09) 29 2.9
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 3.9
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 5.1
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 28 5.1
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.8
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 27 9.0
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 330 bits (810), Expect = 7e-91
Identities = 152/182 (83%), Positives = 157/182 (86%)
Frame = +2
Query: 62 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 241
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 242 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 421
NEA+GGKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 265 NEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 324
Query: 422 LVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 601
LVDSVLDVVRKEAESCDCLQGFQ KIREEYPDRIMNT+SVVP
Sbjct: 325 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 384
Query: 602 SP 607
SP
Sbjct: 385 SP 386
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 325 bits (798), Expect = 2e-89
Identities = 149/173 (86%), Positives = 152/173 (87%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 268
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 269 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 449 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
RKEAESCDCLQGFQ KIREEYPDRIMNT+SVVPSP
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP 173
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 318 bits (781), Expect = 2e-87
Identities = 142/173 (82%), Positives = 152/173 (87%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 268
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 269 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 449 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
RKEAESCDC+QGFQ KIREEYPDRIMNT+S+VPSP
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSP 173
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 206 bits (503), Expect = 1e-53
Identities = 95/117 (81%), Positives = 98/117 (83%)
Frame = +2
Query: 257 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 436
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 437 LDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
LDVVRKEAESCDC+QGFQ KIREEYPDRIMNT+SVVPSP
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSP 118
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 198 bits (482), Expect = 4e-51
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 268
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 269 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 364
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 174 bits (424), Expect = 4e-44
Identities = 76/119 (63%), Positives = 91/119 (76%)
Frame = +2
Query: 251 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 430
+GG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 431 SVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
++ DV+RKEAE+CDC+QG Q KIREEYPDRI++ +SVVPSP
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPSP 129
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 138 bits (335), Expect = 2e-33
Identities = 67/175 (38%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 443 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RK A+ C LQGF ++ +Y + +++ P+P
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 175
Score = 136 bits (329), Expect = 1e-32
Identities = 65/174 (37%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 265
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 445
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 446 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RK A+ C LQGF ++ +Y + +++ P+P
Sbjct: 555 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 608
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 137 bits (331), Expect = 8e-33
Identities = 65/175 (37%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 443 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RK A+ C LQGF ++ +Y + +++ P+P
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 760
Score = 135 bits (327), Expect = 2e-32
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 265
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 445
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 446 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RK A+ C LQGF ++ +Y + +++ P+P
Sbjct: 186 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 239
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 265
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 266 VPRAILVDLEPGTMDSV 316
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 136 bits (328), Expect = 2e-32
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 265
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 445
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 446 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RK A+ C LQGF ++ +Y + +++ P+P
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAP 174
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 134 bits (325), Expect = 4e-32
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 443 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RK A+ C LQGF ++ +Y + +++ P+P
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 175
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 134 bits (325), Expect = 4e-32
Identities = 64/175 (36%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 443 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
RK A+ C LQGF ++ +Y + +++ P+P
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAP 175
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 134 bits (323), Expect = 7e-32
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 265
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 445
VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 446 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RK A+ C LQGF ++ +Y + +++ P+P
Sbjct: 540 IRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPAP 593
Score = 116 bits (279), Expect = 1e-26
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Frame = +2
Query: 134 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEPGTM 307
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 308 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 487
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 488 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
++ +Y + +++ P+P
Sbjct: 121 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 160
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 132 bits (320), Expect = 2e-31
Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 265
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 445
VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 446 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RK A+ C LQGF ++ +Y + +++ P+P
Sbjct: 926 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAP 979
Score = 132 bits (319), Expect = 2e-31
Identities = 64/174 (36%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 265
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 445
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 446 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RK A+ C LQGF ++ +Y + +++ P+P
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAP 546
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 107 bits (257), Expect = 7e-24
Identities = 60/175 (34%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 443 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RK A+ C LQGF ++ +Y + ++V P+P
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAP 165
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 102 bits (244), Expect = 3e-22
Identities = 45/129 (34%), Positives = 70/129 (54%)
Frame = +2
Query: 221 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 400
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 401 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 580
HYT G E +D LD +RK A+ C LQGF ++ +Y +
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 131
Query: 581 NTYSVVPSP 607
++V P+P
Sbjct: 132 LEFAVYPAP 140
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 101 bits (241), Expect = 6e-22
Identities = 45/122 (36%), Positives = 69/122 (56%)
Frame = +2
Query: 242 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 421
+EA+ GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 422 LVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 601
+V+ V+D +RK + C LQGF + +Y + ++V P
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYP 1084
Query: 602 SP 607
+P
Sbjct: 1085 AP 1086
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/80 (51%), Positives = 53/80 (66%)
Frame = +2
Query: 368 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 547
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 548 KIREEYPDRIMNTYSVVPSP 607
KIREEYPDR+++++ V+PSP
Sbjct: 62 KIREEYPDRLVSSFCVLPSP 81
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 76.6 bits (180), Expect = 1e-14
Identities = 34/100 (34%), Positives = 53/100 (53%)
Frame = +2
Query: 308 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 487
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 488 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
++ +Y + +++ P+P
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 112
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 74.1 bits (174), Expect = 8e-14
Identities = 33/98 (33%), Positives = 52/98 (53%)
Frame = +2
Query: 314 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQX 493
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 494 XXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
++ +Y + +++ P+P
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAP 100
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 262
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 263 YVPRAILVDLEPGTMDSVR 319
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 69.3 bits (162), Expect = 2e-12
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 9/177 (5%)
Frame = +2
Query: 98 IVHIQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 259
IV +Q GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 260 KYVPRAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 430
RA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 431 SVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 601
VLD+V++E E CD L GF +R+ YP+ + V P
Sbjct: 123 KVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPNSFIVNNVVWP 179
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/98 (31%), Positives = 50/98 (51%)
Frame = +2
Query: 314 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQX 493
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 494 XXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
++ +Y + ++V P+P
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAP 100
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 314 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 454
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 314 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 454
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +2
Query: 446 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RKEAE CD +QGFQ ++EEYPDRI+++ SV PSP
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSP 54
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 256
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 257 GKY 265
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 146 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 247
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 44.4 bits (100), Expect = 7e-05
Identities = 46/174 (26%), Positives = 65/174 (37%), Gaps = 7/174 (4%)
Frame = +2
Query: 107 IQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 286
+ GQCGNQIG + ++ + P H D L R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCV 44
Query: 287 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 445
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 446 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 607
+RKE E CD G + + YP + + SV SP
Sbjct: 104 MRKEVERCDSFAGTIVMHSLTGGTGSGLGARLVETLSDAYP--LAHVMSVAVSP 155
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.5 bits (93), Expect = 5e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 272 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 391
RA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -2
Query: 484 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVH 305
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 304 GAGL 293
G+
Sbjct: 264 RCGI 267
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 465 DSASFRTTSKTESTSSAPSV*CPLAQL 385
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 333 PKGPERTESMVPGSKSTRMARGTYLP--PEA 247
PKGPER E+ + R +G YLP PEA
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLPSNPEA 868
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 402 CPLAQLLPAPDCPKTKLSGRKICP 331
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 402 CPLAQLLPAPDCPKTKLSGRKICP 331
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 402 CPLAQLLPAPDCPKTKLSGRKICP 331
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 402 CPLAQLLPAPDCPKTKLSGRKICP 331
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 402 CPLAQLLPAPDCPKTKLSGRKICP 331
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 402 CPLAQLLPAPDCPKTKLSGRKICP 331
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 402 CPLAQLLPAPDCPKTKLSGRKICP 331
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 402 CPLAQLLPAPDCPKTKLSGRKICP 331
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
>SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09)
Length = 166
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 460 GIV*LPPGIPTDTLARRRHRFRYGHPPH 543
G+V LPPG+ T H RYGHP H
Sbjct: 7 GMVTLPPGMVTLPPGMVTHFTRYGHPFH 34
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = -3
Query: 381 PAPDCPKTKLSGRKICPKGPERTESMVPGS----KSTRMARGTYLPPEASL*YTLMRSN 217
P P P T + P GP+ PG TR+ GT PP A ++RSN
Sbjct: 102 PPPTMPPTPPPPQTPAPPGPDTPAPPAPGGCGAKPHTRIVGGTKAPPGAWPWQAMLRSN 160
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 378 APDCPKTKLSGRKICPKGPERTESMVPGSKST 283
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +2
Query: 428 DSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 604
D+ D +R AE CD LQGFQ +R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPA 277
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 259
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 260 KYVPRAILVDLE 295
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +2
Query: 428 DSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 604
D+ D +R AE CD LQGFQ +R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPA 277
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 414 PSV*CPLAQLLPAPD-CPKTKLSGRKICPKGPERTESMVPGSKSTRMARGTYLPPEA 247
P + P+ Q D CP+ + RK P G + + G+ S +++G +PP A
Sbjct: 440 PGMTHPMGQPTAMGDLCPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 158 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 298
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -2
Query: 478 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADR 311
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -3
Query: 459 ASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSKSTR 280
AS T T+ S+ P+ + + A PK+ ++ PK + + V KS
Sbjct: 1749 ASTEATEMTQKFSNVPATVALKSSNVEAKITPKSSTDAARLIPKASKSSTGSV-NVKSRS 1807
Query: 279 MARGTYLPPEAS 244
T + P+AS
Sbjct: 1808 STNATQITPKAS 1819
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 244 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 143
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,781,156
Number of Sequences: 59808
Number of extensions: 365904
Number of successful extensions: 1008
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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