Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10k01f
         (608 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    99   1e-22
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    99   1e-22
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    99   1e-22
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    99   1e-22
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    27   0.63 
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   5.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   5.8  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   5.8  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   7.7  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   7.7  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   7.7  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   7.7  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 98.7 bits (235), Expect = 1e-22
 Identities = 47/69 (68%), Positives = 49/69 (71%)
 Frame = +2

Query: 401 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 580
           HYTEGAELVD+VLDVVRKE E+CDCLQGFQ                   KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 581 NTYSVVPSP 607
           NTYSVVPSP
Sbjct: 61  NTYSVVPSP 69


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 98.7 bits (235), Expect = 1e-22
 Identities = 47/69 (68%), Positives = 49/69 (71%)
 Frame = +2

Query: 401 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 580
           HYTEGAELVD+VLDVVRKE E+CDCLQGFQ                   KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 581 NTYSVVPSP 607
           NTYSVVPSP
Sbjct: 61  NTYSVVPSP 69


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 98.7 bits (235), Expect = 1e-22
 Identities = 47/69 (68%), Positives = 49/69 (71%)
 Frame = +2

Query: 401 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 580
           HYTEGAELVD+VLDVVRKE E+CDCLQGFQ                   KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 581 NTYSVVPSP 607
           NTYSVVPSP
Sbjct: 61  NTYSVVPSP 69


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 98.7 bits (235), Expect = 1e-22
 Identities = 47/69 (68%), Positives = 49/69 (71%)
 Frame = +2

Query: 401 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 580
           HYTEGAELVD+VLDVVRKE E+CDCLQGFQ                   KIREEYPDRIM
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 581 NTYSVVPSP 607
           NTYSVVPSP
Sbjct: 61  NTYSVVPSP 69


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 26.6 bits (56), Expect = 0.63
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 89  MREIVHIQAGQCGNQIGAKFWE 154
           MRE + +  GQ G QIG   W+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +2

Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIF----RPDNFVFGQSGAGNNWAKGHYTEGAEL 424
           +P   +  L  G+ +S     FG  F    RP N+ + ++   NN  + H T  A L
Sbjct: 106 LPSLAITGLSIGSSNSSFLRQFGPQFTGTKRPQNWFYSRNNNNNNNNEHHNTYNARL 162


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
          protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -2

Query: 61 YLTLKICSARSTHCRGR 11
          YLT    S R THC GR
Sbjct: 12 YLTHDSPSVRKTHCTGR 28


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 362 FGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
           FG    G +   G YT  +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 438 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 325
           K   T +  +  CPL  ++   DC   +L   KI  KG
Sbjct: 195 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 232


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 438 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 325
           K   T +  +  CPL  ++   DC   +L   KI  KG
Sbjct: 196 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 233


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 143 KFWEIISDEHGIDPTG 190
           KFW  + D  GI+ TG
Sbjct: 225 KFWPTVCDYFGIESTG 240


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +2

Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIF----RPDNFVFGQSGAGNNWAKGHYTEGAEL 424
           +P   +  L  G+ +S     FG  F    RP N+ + ++   NN  + H T  A L
Sbjct: 106 LPSLAITGLSIGSSNSRFLRQFGPQFTGTNRPQNWFYSRNNNNNNNNEHHNTYNARL 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,089
Number of Sequences: 2352
Number of extensions: 12247
Number of successful extensions: 49
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)