Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j21r
(721 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb... 40 3e-04
SPAC6G10.03c |||abhydrolase family protein, unknown biological r... 31 0.13
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo... 28 1.2
SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual 27 2.7
SPAC57A10.08c |||esterase/lipase |Schizosaccharomyces pombe|chr ... 27 2.7
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 6.2
SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyce... 25 8.2
SPBC1105.05 |exg1||glucan 1,3-beta-glucosidase I/II precursor|Sc... 25 8.2
SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr 1... 25 8.2
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 25 8.2
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 25 8.2
>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = -2
Query: 555 AFNFMKALNIPKYSILGWSDGGITGIIHAAKYPETVQKLVI 433
AF FMK + K SI+G S G T ++ A K+P+ V+KLV+
Sbjct: 77 AFQFMKDHKLDKASIIGHSMGAKTAMVTALKWPDKVEKLVV 117
>SPAC6G10.03c |||abhydrolase family protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 428
Score = 31.5 bits (68), Expect = 0.13
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -2
Query: 231 LKDVKCPTLILYGEKDPLVDRVHVSHLH----THIEGSRIHLYPDGKHNIHISYAEDFNK 64
L+ +KC T+ +YG+KD + D + + +IE H+ + H+ ++ EDFN+
Sbjct: 352 LRMLKCRTIFMYGDKDWMDDVAGLEATNRLKEMNIEAEH-HIISNAGHHCYLDNPEDFNE 410
Query: 63 KV 58
V
Sbjct: 411 IV 412
>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 443
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 225 DVKCPTLILYGEKDPLVD 172
++KCP LIL+G KD L++
Sbjct: 365 NIKCPMLILWGGKDTLIN 382
>SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 252 GNICSELLKDVKCPTLILYGEKDPLVDRVHVSHLHTHIEGSRIH 121
G++ S + P I+Y EK P RV++ L + G+RI+
Sbjct: 353 GSLSSTIYNPSSSPRTIVYFEKFPWFVRVYLHTLTITLNGTRIN 396
>SPAC57A10.08c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 364
Score = 27.1 bits (57), Expect = 2.7
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2
Query: 219 KCPTLILYGEKDPL 178
KCP LIL+GE DP+
Sbjct: 298 KCPILILFGEFDPV 311
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.8 bits (54), Expect = 6.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 194 PYSIRVGHLTSFSNSEHILPSFL 262
P++I++GH+ + + H PSFL
Sbjct: 1308 PFTIQIGHIDAITYCLHRSPSFL 1330
>SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 563
Score = 25.4 bits (53), Expect = 8.2
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -2
Query: 453 TVQKLVIWGSNSFMLP 406
T++KL++WG N ++P
Sbjct: 536 TLEKLLVWGDNHVLMP 551
>SPBC1105.05 |exg1||glucan 1,3-beta-glucosidase I/II
precursor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 407
Score = 25.4 bits (53), Expect = 8.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 633 DPPGYGKSRPPMKQFDVDFY 574
+P GYG +KQ+D+D Y
Sbjct: 213 EPLGYGLDMDQLKQYDLDAY 232
>SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 25.4 bits (53), Expect = 8.2
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -3
Query: 191 KKILWWTEFMYRICILI 141
+K +WW + R+CI+I
Sbjct: 85 RKKMWWKDMRMRLCIII 101
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 8.2
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Frame = +1
Query: 100 VLPIGVQMYS*SFNMSMQMR-YMNSV-----HQRIFFSIQYKGRAFDILQ 231
V IG +M+S N+S +R Y++S+ Q I F+ Y G AF+ LQ
Sbjct: 248 VFAIG-EMFSYDPNVSCSVRNYLDSITSYPIRQGIEFAFNYTGAAFEYLQ 296
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 25.4 bits (53), Expect = 8.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 33 IRVIEGSLELFY*NLLHNLCGYCASHRGTNV 125
+ + E S+++ +H LC CASH T +
Sbjct: 560 LHISETSIQMTVSRSIHTLCTTCASHLLTEI 590
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,203,045
Number of Sequences: 5004
Number of extensions: 72323
Number of successful extensions: 210
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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