Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j21r
(721 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1312 - 25699811-25699912,25700410-25700548,25700655-257007... 41 9e-04
09_05_0003 + 20016534-20016703,20017679-20017915,20018585-200186... 37 0.014
01_05_0459 - 22435374-22435397,22435517-22435691,22435881-224359... 36 0.024
03_03_0198 + 15361048-15361746,15361854-15361946,15362035-153621... 36 0.043
06_01_0228 - 1736373-1736721,1739915-1740120,1740513-1740844,174... 35 0.057
07_03_1003 + 23239829-23240121,23240257-23240349,23240785-232409... 34 0.099
07_03_1173 - 24526632-24526755,24527057-24527226,24527441-245275... 34 0.13
11_04_0005 - 12021087-12021473 31 0.70
10_06_0001 - 9366721-9367293 31 0.92
03_02_0068 + 5390004-5390425,5390517-5390949 31 0.92
10_08_0517 + 18482902-18482986,18483074-18483291,18483888-184840... 31 1.2
10_08_0515 - 18473545-18473791,18473921-18474156,18474299-184744... 31 1.2
10_08_0516 + 18478743-18478830,18478940-18479319,18479406-184796... 30 1.6
02_05_0450 - 29117826-29118212,29118307-29118733,29119158-291192... 30 1.6
03_06_0369 + 33425251-33425778,33425864-33426051,33426152-334262... 30 2.1
06_01_1093 - 8970996-8971667,8971756-8971902,8971982-8972118,897... 29 2.8
03_06_0541 - 34607071-34607353,34608167-34608399,34609093-346092... 29 2.8
02_05_1073 - 33895608-33895880,33896133-33896180,33896273-338965... 29 2.8
01_05_0635 - 23847255-23847287,23847397-23848083,23848178-238485... 29 2.8
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100... 28 8.6
03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059 28 8.6
01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999 28 8.6
>07_03_1312 -
25699811-25699912,25700410-25700548,25700655-25700722,
25700803-25700895,25706303-25706902
Length = 333
Score = 41.1 bits (92), Expect = 9e-04
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
Frame = -2
Query: 543 MKALNIPKYSILGWSDGGITGIIHAAKYPETVQKLVIWGSNSFMLPHELEMXXXXXXXXX 364
M A+ + ++ ++G S GG G AA YP+ V+++V+ + + +L
Sbjct: 128 MDAIGVARFGLVGVSYGGFVGYRMAAMYPDAVERVVLVCAGVCLEEKDLAGGLFPVAGVG 187
Query: 363 XXXKMRQPMIDVYGEELFAKYWSKWVEGMENLFNKKDGNICSELLKDVKCPTLILYGEKD 184
+ P E + + Y + E + L +++ S+ L + P LI++GE+D
Sbjct: 188 EAADLLVPRRP--EEVMGSDYIQEKTELLYALISERQ---LSD-LPIISQPALIVWGERD 241
Query: 183 PLVDRVHVSHLHTHI-EGSRIHLYPDGKHNIHISYAEDFNKKVQDFLQ 43
+ L H+ E SR+ + + H +++ +D + + +F Q
Sbjct: 242 KVFPMELAHRLKRHLGESSRLVVIRNAGHAVNLEKPKDVCRNIIEFFQ 289
>09_05_0003 +
20016534-20016703,20017679-20017915,20018585-20018631,
20018932-20019050,20019128-20019288,20019379-20019488,
20019571-20019670,20019701-20019743,20020375-20020503
Length = 371
Score = 37.1 bits (82), Expect = 0.014
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -2
Query: 651 FTLVAWDPPGYG-KSRPPMKQFDVDFYEKDADYAFN-FMKALNIPKYSILGWSDGGITGI 478
F ++A D G+G SRP + E +F + KA N+ + +LG S GG
Sbjct: 127 FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAA 186
Query: 477 IHAAKYPETVQKLVIWGSNSF 415
+A ++PE VQ L++ G F
Sbjct: 187 KYALQHPEHVQHLILVGPAGF 207
>01_05_0459 -
22435374-22435397,22435517-22435691,22435881-22435974,
22436103-22436267,22436566-22436687,22437224-22437306,
22437473-22437591,22437890-22437935
Length = 275
Score = 36.3 bits (80), Expect = 0.024
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 3/212 (1%)
Frame = -2
Query: 666 IDKNDFTLVAWDPPGYGKSRPPMKQFDVDFYEKDADYAFNFMKALNIPKY---SILGWSD 496
+ K + +D G G+S +F Y K+AD + + LN KY +I+G S
Sbjct: 67 LTKKGVGIFRFDFSGNGESEG---EFQYGNYRKEADDLHSVISHLNQEKYDVKAIVGHSK 123
Query: 495 GGITGIIHAAKYPETVQKLVIWGSNSFMLPHELEMXXXXXXXXXXXXKMRQPMIDVYGEE 316
GG +++A+ Y + + V+ S F L +E ++ IDV
Sbjct: 124 GGDVVVLYASIYDDV--RTVVNLSGRFHLEKGIEERLGKEFMNIID---KEGYIDVKTNS 178
Query: 315 LFAKYWSKWVEGMENLFNKKDGNICSELLKDVKCPTLILYGEKDPLVDRVHVSHLHTHIE 136
Y ME L C + K+ C ++G D ++ HI
Sbjct: 179 GKVLYKVTKESLMERLTTDMH-KACLSISKE--CRFFTVHGSADEIIPVEDAYEFAKHIP 235
Query: 135 GSRIHLYPDGKHNIHISYAEDFNKKVQDFLQS 40
++H+ +G ++ + ++ ++ + V DF+ S
Sbjct: 236 NHKLHVI-EGANHCYTAHRKELSDAVVDFITS 266
>03_03_0198 +
15361048-15361746,15361854-15361946,15362035-15362102,
15362255-15362393,15362481-15362483
Length = 333
Score = 35.5 bits (78), Expect = 0.043
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = -2
Query: 285 EGMENLFNKKDGNICSELLKDVKCPTLILYGEKDPLVDRVHVSHLHTHI-EGSRIHLYPD 109
E E L +G S+L K + PTLI++GE+D + L H+ E SR+ +
Sbjct: 242 EKTELLHTLINGRKLSDLPK-ISQPTLIIWGEQDQVFPMELAHRLERHLGEKSRLVVIKK 300
Query: 108 GKHNIHISYAEDFNKKVQDFLQSP 37
H +++ ++ K + ++L+ P
Sbjct: 301 AGHAVNLEKDKEVCKNIVEYLREP 324
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 543 MKALNIPKYSILGWSDGGITGIIHAAKYPETVQKLVI 433
M A+ + ++ ++G S GG AA YPE V + V+
Sbjct: 135 MDAIGVRRFDVVGVSYGGFVAYRMAAMYPEAVDRAVM 171
>06_01_0228 -
1736373-1736721,1739915-1740120,1740513-1740844,
1740935-1741499
Length = 483
Score = 35.1 bits (77), Expect = 0.057
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = -2
Query: 696 WTDYK-PQIEGIDKNDFTLVAWDPPGYGKSRPPMKQFDVDFYEKDADYAFNFMKALNIPK 520
WT+ P K + + A D G+G+S P E + ++ + K
Sbjct: 209 WTETVFPAFSEAAKGRYRMFAVDLLGFGRSPKPADSL-YTLREHVEMIERSVLQRYRLRK 267
Query: 519 YSILGWSDGGITGIIHAAKYPETVQKLVIWGSNSFMLPHE 400
+ ++ S G + + A KYP+ VQ L + F +P E
Sbjct: 268 FHVVAHSLGSVLALALAVKYPDAVQSLTLLAPPYFPVPEE 307
>07_03_1003 +
23239829-23240121,23240257-23240349,23240785-23240993,
23241585-23241729,23241809-23241881,23242165-23242311,
23242411-23242536,23242653-23242712
Length = 381
Score = 34.3 bits (75), Expect = 0.099
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2
Query: 252 GNICSELLKDVKCPTLILYGEKDP 181
G + ELL VKCP L+ +GEKDP
Sbjct: 309 GPLPEELLPRVKCPVLVAWGEKDP 332
>07_03_1173 -
24526632-24526755,24527057-24527226,24527441-24527506,
24527858-24527953,24528340-24528438,24528730-24528819,
24529016-24529111,24529561-24529654,24530254-24530351,
24530395-24530679
Length = 405
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = -2
Query: 291 WVEGMENLFNKKDGNICSELLKDVKCPTLILYGEKDPLVDRVHVSHLHTHIEGSRIHLYP 112
W + + + N+ +++ VK LIL+GE+D ++ LH + + +
Sbjct: 265 WEDALVDFMMNGGYNVLNQI-NQVKHKCLILWGEEDGIISNKQAYRLHQELPDAILRQVR 323
Query: 111 DGKHNIHISYAEDFNKKVQDFL 46
+ H H+ + K V DFL
Sbjct: 324 ECGHIPHVEKPSEVLKHVLDFL 345
>11_04_0005 - 12021087-12021473
Length = 128
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 306 KYWSKWVEGMENLFNKKDGNICSELLKDVKCPTLILYGEKDPLVDRVHVSHLHTH 142
+Y + ++EG++ N S+ KD++CP + +K V HL TH
Sbjct: 11 RYRASYIEGVDIFMKAAKKNAASKKTKDIRCPCVHCKNQKSWKDPSVIEQHLVTH 65
>10_06_0001 - 9366721-9367293
Length = 190
Score = 31.1 bits (67), Expect = 0.92
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -2
Query: 306 KYWSKWVEGMENLFNKKDGNICSELLKDVKCPTLILYGEKDPLVDRVHVSHLHTHIEGSR 127
+Y + + EG++ N S+ K+++CP + +K + V HL TH G+R
Sbjct: 11 RYRASYTEGVDIFMKAAKKNAASKKTKEIRCPCVHCKNQKIWINPSVIEQHLVTHGFGAR 70
>03_02_0068 + 5390004-5390425,5390517-5390949
Length = 284
Score = 31.1 bits (67), Expect = 0.92
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -2
Query: 654 DFTLVAWDPPGYGKSRPPMKQFDVDFYEK-DA--DYAFNFMKALNIPKYSILGWSDGGIT 484
D +V +D G P FD Y+ DA D + AL IP+ + +G S +
Sbjct: 61 DHRVVLYDLVCAGSVNPD--HFDFRRYDNLDAYVDDLLAILDALRIPRCAFVGHSVSAMI 118
Query: 483 GIIHAAKYPETVQKLVIWGSN 421
GI+ + + P+ KLV+ G++
Sbjct: 119 GILASIRRPDLFAKLVLIGAS 139
>10_08_0517 +
18482902-18482986,18483074-18483291,18483888-18484049,
18484132-18484367,18484455-18484710
Length = 318
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = -2
Query: 699 IWTDYKPQIEGIDKNDFTLVAWDPPGYGKSRPPMKQFDVDFYEKDADYAFNFMKALNIPK 520
IW ++ Q+ + + VA D GYG S P + + Y+ + + AL +PK
Sbjct: 43 IWYSWRHQMLAVAAAGYRAVAPDWRGYGLSDQPPEP-EAAVYDDLIEDLLAILDALAVPK 101
Query: 519 YSILGWSDGGITGIIHAAKYP 457
++G G + A ++P
Sbjct: 102 AFLVGKDFGAMPAYDFALRHP 122
>10_08_0515 -
18473545-18473791,18473921-18474156,18474299-18474460,
18474731-18474948,18475048-18475120
Length = 311
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/91 (25%), Positives = 37/91 (40%)
Frame = -2
Query: 699 IWTDYKPQIEGIDKNDFTLVAWDPPGYGKSRPPMKQFDVDFYEKDADYAFNFMKALNIPK 520
+W ++ Q+ F +A D PGYG S PP + D + +L+IPK
Sbjct: 39 VWYSWRHQMIAAAAAGFRAIALDFPGYGLSEPPADLTQASWQGLMND-LLAILDSLSIPK 97
Query: 519 YSILGWSDGGITGIIHAAKYPETVQKLVIWG 427
++ G A +P+ V +V G
Sbjct: 98 VFLVAKDFGVKPAYDLALCHPDRVCGIVSLG 128
>10_08_0516 +
18478743-18478830,18478940-18479319,18479406-18479641,
18480280-18480538
Length = 320
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/91 (24%), Positives = 39/91 (42%)
Frame = -2
Query: 699 IWTDYKPQIEGIDKNDFTLVAWDPPGYGKSRPPMKQFDVDFYEKDADYAFNFMKALNIPK 520
IW ++ Q+ + VA D GYG S P +Q + + + AD + AL +P
Sbjct: 44 IWYSWRHQMLAAAAAGYRAVAPDWRGYGLSGQPPEQEEATWDDLVAD-VLAILDALAVPG 102
Query: 519 YSILGWSDGGITGIIHAAKYPETVQKLVIWG 427
++G G + A ++P + + G
Sbjct: 103 AFLVGKDFGAMPAYDFALRHPARTRGVACLG 133
>02_05_0450 -
29117826-29118212,29118307-29118733,29119158-29119296,
29119426-29119530,29119624-29119705
Length = 379
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -2
Query: 234 LLKDVKCPTLILYGEKDPLVDRVHVSHLHTHIEGSRIHLYPDGKHNIHISYAEDFNKKVQ 55
LL + CP L+L+G+ DP V + + + + + G H H E FN +
Sbjct: 299 LLGKLSCPLLLLWGDLDPWVGPAKAAQIKKFYQDTTVVNLQAG-HCPHDEAPEQFNGALL 357
Query: 54 DFLQS 40
++L S
Sbjct: 358 EWLAS 362
>03_06_0369 +
33425251-33425778,33425864-33426051,33426152-33426251,
33426366-33426578,33426616-33426822,33426908-33427095,
33427234-33427492
Length = 560
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -2
Query: 180 LVDRVHVSHLHTHIEGSRIHLYPDGKHNIHISYAEDFNKK 61
L+D HV + H + +R P G++NIH+ Y +F+K+
Sbjct: 247 LMDPAHVPYAHKGLMRTRKKEDP-GRYNIHLLYTVEFDKE 285
>06_01_1093 -
8970996-8971667,8971756-8971902,8971982-8972118,
8972343-8972612,8972731-8972868,8974965-8975394
Length = 597
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 717 PGALGTIWTDYKPQIEGIDKNDFTLVAWDPPGYGK 613
PG LGT+W+ + Q G + AW PG G+
Sbjct: 15 PGQLGTLWSTLEDQRGGAREVPLLSSAWGLPGGGR 49
>03_06_0541 -
34607071-34607353,34608167-34608399,34609093-34609275,
34609357-34609659
Length = 333
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/88 (22%), Positives = 36/88 (40%)
Frame = -2
Query: 699 IWTDYKPQIEGIDKNDFTLVAWDPPGYGKSRPPMKQFDVDFYEKDADYAFNFMKALNIPK 520
+W ++ Q+ + + VA D GYG + P + + D + AL +P+
Sbjct: 43 LWYSWRHQMGHLAARGYRCVAPDLRGYGGTTAPPEHTSYTIFHLVGDLV-ALLDALELPQ 101
Query: 519 YSILGWSDGGITGIIHAAKYPETVQKLV 436
++G G I P+ V+ LV
Sbjct: 102 VFVVGHDWGAIVSWNLCLLRPDRVRALV 129
>02_05_1073 -
33895608-33895880,33896133-33896180,33896273-33896509,
33897233-33897269,33898603-33898913
Length = 301
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = -2
Query: 231 LKDVKCPTLILYGEKDPLVDRVHVSHLHTHIEGSRIHLYPDGKHNIHISYAEDFNKKVQD 52
+K V CP L+++G D +VD H L + L+ G + ++ ++ + ++
Sbjct: 200 IKQVDCPVLVIHGTADDIVDFSHGKRLWELAKEKYEPLWVKGGGHCNLETYPEYIRHLRK 259
Query: 51 FLQS 40
F+ +
Sbjct: 260 FINA 263
>01_05_0635 -
23847255-23847287,23847397-23848083,23848178-23848540,
23848633-23848725,23848820-23848870,23849031-23849304,
23849766-23850595
Length = 776
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 111 DGKHNIHISYAEDFNKKVQDFL 46
DG H+I +SY E +N+ V+D L
Sbjct: 334 DGNHSIQLSYLEVYNETVRDLL 355
>06_03_1306 + 29208882-29209547,29209641-29209854,29209947-29210023,
29210132-29210171,29210254-29210323,29210419-29210488,
29210747-29210995,29212810-29214700,29215458-29215771
Length = 1196
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 228 KDVKCPTLILYGEKDPLVDRVHVSHLHTHIEGSRIHLYPDGKHNIHISY 82
+D+KC +G+ P+VD + +LHT + + L P + SY
Sbjct: 991 EDIKCNLRDKHGDYWPMVDEIWDHYLHTPVHAAGYILNPRIFYTERFSY 1039
>03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059
Length = 338
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -2
Query: 699 IWTDYKPQIEGIDKNDFTLVAWDPPGYGKSRPPMKQFDVDFYEKDADYAFNFMKALNIPK 520
+W ++ Q+E + F +A D GYG + P + + D + AL + K
Sbjct: 47 LWYSWRHQMEHLAGRGFRCLAPDLRGYGDTDAPPEIESYSAFHVVGDLV-ALLDALGLAK 105
Query: 519 YSILGWSDGGITGIIHAAKYPETVQKLV 436
++G G I P+ V LV
Sbjct: 106 VFVVGHDWGAIIAWYMCLFRPDRVTALV 133
>01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999
Length = 764
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 627 PGYGKSRPPMKQFDVDFYEKDAD-YAFNFMKALNIPKYSILGWSDGGIT 484
P G+S P+K+ D Y KD F MKA + + ++G S GG++
Sbjct: 48 PQNGQSCSPLKEIDDVGYSKDCGALPFELMKA-RVAERLMVGVSHGGVS 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,528,594
Number of Sequences: 37544
Number of extensions: 415951
Number of successful extensions: 898
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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