Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j21f
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099925-2|AAC69505.1| 265|Caenorhabditis elegans Hypothetical ... 75 3e-14
U88315-13|AAN84844.1| 359|Caenorhabditis elegans Hypothetical p... 38 0.005
U88315-12|AAB42367.1| 444|Caenorhabditis elegans Hypothetical p... 38 0.005
U23523-1|AAC46560.2| 305|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z83103-8|CAE17765.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z83103-7|CAE17764.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z83103-6|CAD44104.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF125443-1|AAD12801.1| 783|Caenorhabditis elegans Hypothetical ... 28 4.4
Z49130-3|CAA88968.1| 395|Caenorhabditis elegans Hypothetical pr... 27 7.6
>AF099925-2|AAC69505.1| 265|Caenorhabditis elegans Hypothetical
protein K01A2.5 protein.
Length = 265
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = +1
Query: 253 EEKVKVSGCNINYVKVGKGSHNLICLPGALGTIWTDYKPQI-EGIDKNDFTLVAWDPPGY 429
E + I Y K G G + ++ + GA+G D+ ++ + T+V DPPGY
Sbjct: 8 ESSEHIKDTQIGYCKYGHGPNYILAICGAVGCYKKDWPLKLLSHFPPDQVTIVGIDPPGY 67
Query: 430 GKSRPPMKQFDVDFYEKDADYAFNFMKALNIPKYSILGWSDGGITGIIHAAK 585
G SRPP ++ +V KD++Y M+ L + ++++GWS+G T + AAK
Sbjct: 68 GTSRPPERKQEVQRCMKDSEYCLGLMETLKLEPFTVMGWSEGARTTVHVAAK 119
>U88315-13|AAN84844.1| 359|Caenorhabditis elegans Hypothetical
protein C37H5.3b protein.
Length = 359
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 400 TLVAWDPPGYGKSRPPMKQFDVDFYEKD-ADYAFNFMKALNIPKYSILGWSDGGITGIIH 576
T+ A+D PG+G+S P D + E + D + +N+ K +++G S GG +
Sbjct: 103 TVHAFDLPGFGRSSRPKFSSDPETAETEMIDSIEQWRDKMNLEKMNLVGHSFGGYLATSY 162
Query: 577 AAKYP 591
A KYP
Sbjct: 163 ALKYP 167
>U88315-12|AAB42367.1| 444|Caenorhabditis elegans Hypothetical
protein C37H5.3a protein.
Length = 444
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 400 TLVAWDPPGYGKSRPPMKQFDVDFYEKD-ADYAFNFMKALNIPKYSILGWSDGGITGIIH 576
T+ A+D PG+G+S P D + E + D + +N+ K +++G S GG +
Sbjct: 188 TVHAFDLPGFGRSSRPKFSSDPETAETEMIDSIEQWRDKMNLEKMNLVGHSFGGYLATSY 247
Query: 577 AAKYP 591
A KYP
Sbjct: 248 ALKYP 252
>U23523-1|AAC46560.2| 305|Caenorhabditis elegans Hypothetical
protein F53A9.5 protein.
Length = 305
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 391 NDFTLVAWDPPGYGKSRPPMKQFDVDFYEKDADYAFNFMKALNIPKYSILG 543
N+ TLV D PG+ S + +F E DY ++ L IP +LG
Sbjct: 10 NNSTLVTTDQPGFSGSTKGTCSYPTNFAE--VDYISTYIYLLAIPTICVLG 58
>Z83103-8|CAE17765.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.9 protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 202 NCIKMLHAKCMSTAVP-KEEKVKVSGCNINYVKVG 303
+CI KC P K+++ K++GCN Y+ +G
Sbjct: 69 SCINDRRFKCCLATFPAKKQEFKMTGCNRRYLNLG 103
>Z83103-7|CAE17764.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.8 protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 202 NCIKMLHAKCMSTAVP-KEEKVKVSGCNINYVKVG 303
+CI KC P K+++ K++GCN Y+ +G
Sbjct: 69 SCINDRRFKCCLATFPAKKQEFKMTGCNRRYLNLG 103
>Z83103-6|CAD44104.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.7 protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 202 NCIKMLHAKCMSTAVP-KEEKVKVSGCNINYVKVG 303
+CI KC P K+++ K++GCN Y+ +G
Sbjct: 69 SCINDRRFKCCLATFPAKKQEFKMTGCNRRYLNLG 103
>AF125443-1|AAD12801.1| 783|Caenorhabditis elegans Hypothetical
protein H32C10.3 protein.
Length = 783
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 382 IDKNDFTLVAWDPPGYGKSRPPMKQFDVDFYEKDAD-YAF 498
ID DF+L+ +P +S P K F D EK D Y F
Sbjct: 505 IDYIDFSLILTNPGVLPRSTTPFKDFIKDLEEKQIDRYCF 544
>Z49130-3|CAA88968.1| 395|Caenorhabditis elegans Hypothetical
protein T06D8.5 protein.
Length = 395
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 227 FACNILIQFVVRKIAFLSVISIFS 156
F ++ +QFV R +A+L+VIS+ S
Sbjct: 301 FENDVTVQFVHRNLAYLTVISVLS 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,567,598
Number of Sequences: 27780
Number of extensions: 264528
Number of successful extensions: 638
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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