Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j19f
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 149 2e-36
AF026214-2|AAB71314.2| 446|Caenorhabditis elegans Hypothetical ... 84 7e-17
Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z81049-2|CAB02847.2| 576|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AB030946-1|BAA90483.1| 576|Caenorhabditis elegans high-affinity... 43 2e-04
AL117207-12|CAD88220.1| 324|Caenorhabditis elegans Hypothetical... 33 0.18
Z81484-6|CAB03968.2| 314|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z81484-1|CAB03967.1| 314|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF038606-8|AAB92022.2| 313|Caenorhabditis elegans Serpentine re... 30 1.6
AF022969-2|AAB69893.2| 354|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81050-8|CAB02859.1| 371|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81047-12|CAB60283.1| 322|Caenorhabditis elegans Hypothetical p... 29 2.2
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 29 2.2
AL110485-26|CAB60359.3| 779|Caenorhabditis elegans Hypothetical... 29 2.9
Z32683-15|CAE17933.2| 375|Caenorhabditis elegans Hypothetical p... 29 3.8
Z82276-4|CAB05241.3| 327|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81489-11|CAJ30223.1| 323|Caenorhabditis elegans Hypothetical p... 28 5.0
AL117202-8|CAB57891.1| 547|Caenorhabditis elegans Hypothetical ... 28 5.0
U56963-3|AAP31428.1| 312|Caenorhabditis elegans Serpentine rece... 28 6.6
AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical ... 28 6.6
AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical ... 28 6.6
AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical... 28 6.6
AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical ... 28 6.6
AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical ... 28 6.6
AC024090-4|AAK67221.1| 300|Caenorhabditis elegans Hypothetical ... 28 6.6
AC006617-11|AAF39766.2| 356|Caenorhabditis elegans Serpentine r... 28 6.6
U70848-1|AAB09107.2| 434|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF039051-10|AAB94259.3| 313|Caenorhabditis elegans Serpentine r... 27 8.7
AF026209-10|AAB71273.2| 355|Caenorhabditis elegans Serpentine r... 27 8.7
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 149 bits (361), Expect = 2e-36
Identities = 75/196 (38%), Positives = 121/196 (61%), Gaps = 6/196 (3%)
Frame = +3
Query: 81 VYFDWLDYVVFGAMLLLSSLIGVYFAFFAS---KKQNTTS--EYLMGGKTMGMFPISMSL 245
V WLDY +FG + LS GVY A + ++ + T+ EYLMGG+ + P+++SL
Sbjct: 5 VSLHWLDYAIFGLSIGLSLSTGVYHAIKSRIILRRGDRTAKEEYLMGGRQLPPLPVALSL 64
Query: 246 IASYISGISLLGLPAEMYTYGTQLWTIVLSEWAVSLTIAIIYLPVFYNLQITSTYEYLRL 425
+ +++SGI +LG+PAEM+ G Q+W + A S+ ++LPVF+ ++ T +EY
Sbjct: 65 LTTFLSGILMLGVPAEMFQRGAQIWLNFVIGVASSIVTCFVFLPVFHKMKSTCLHEYFIH 124
Query: 426 RFNQ-KVRLLGSVIFIIKMLLYIPIVIYVPALAFSQVTGVNLHLITPIVCIVCIFYTTLG 602
R+N +R L S++F++ ++Y+ +V+Y P++A S V +N + I YT LG
Sbjct: 125 RYNSILIRRLFSLLFLLFTIVYMSVVLYAPSVALSPVLQINKWYLVLIFGCTTTLYTCLG 184
Query: 603 GIKAVVWTDTLQTVLM 650
G+KAVVWTD+LQ V+M
Sbjct: 185 GLKAVVWTDSLQAVIM 200
>AF026214-2|AAB71314.2| 446|Caenorhabditis elegans Hypothetical
protein F52H2.4 protein.
Length = 446
Score = 84.2 bits (199), Expect = 7e-17
Identities = 33/98 (33%), Positives = 63/98 (64%)
Frame = +3
Query: 357 IAIIYLPVFYNLQITSTYEYLRLRFNQKVRLLGSVIFIIKMLLYIPIVIYVPALAFSQVT 536
+A ++LPV Y L++T+ YEY RF+ K R + + +F ++M+LY + +Y P+LA + +T
Sbjct: 16 VAFVFLPVLYRLKLTTIYEYFERRFDYKCRFVTTSLFCVQMILYNSVALYAPSLAIASIT 75
Query: 537 GVNLHLITPIVCIVCIFYTTLGGIKAVVWTDTLQTVLM 650
+ + + I ++ FY ++GG+KA + T +Q +L+
Sbjct: 76 NIPITVSILITAVLSAFYISVGGVKAGIHTSAIQMLLI 113
>Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical
protein ZK822.5b protein.
Length = 431
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +3
Query: 495 IVIYVPALAFSQVTGVNLHLITPIVCIVCIFYTTLGGIKAVVWTDTLQTVLM 650
+V+Y P++A S V +N + I YT LGG+KAVVWTD+LQ V+M
Sbjct: 3 VVLYAPSVALSPVLQINKWYLVLIFGCTTTLYTCLGGLKAVVWTDSLQAVIM 54
>Z81049-2|CAB02847.2| 576|Caenorhabditis elegans Hypothetical
protein C48D1.3 protein.
Length = 576
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/152 (18%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Frame = +3
Query: 186 TSEYLMGGKTMGMFPISMSLIASYISGISLLGLPAEMYTYGTQLWTIVLSEWAVSLTIA- 362
T E ++ G+ +G ++ A+++ G + G +Y G L +A+SL +
Sbjct: 42 TEEVMLAGRNIGTLVGIFTMTATWVGGAYINGTAEALYNGGL-LGCQAPVGYAISLVMGG 100
Query: 363 IIYLPVFYNLQITSTYEYLRLRFNQKVRLLGSVIFIIKMLLYIPIVIYVPALAFSQVTGV 542
+++ + + + ++ Q++ L V ++ + ++ S + G+
Sbjct: 101 LLFAKKMREEGYITMLDPFQHKYGQRIGGLMYVPALLGETFWTAAILSALGATLSVILGI 160
Query: 543 NLHLITPIVCIVCIFYTTLGGIKAVVWTDTLQ 638
+++ + + +FYT GG AV +TD +Q
Sbjct: 161 DMNASVTLSACIAVFYTFTGGYYAVAYTDVVQ 192
>AB030946-1|BAA90483.1| 576|Caenorhabditis elegans high-affinity
choline transporterCHO-1 protein.
Length = 576
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/152 (18%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Frame = +3
Query: 186 TSEYLMGGKTMGMFPISMSLIASYISGISLLGLPAEMYTYGTQLWTIVLSEWAVSLTIA- 362
T E ++ G+ +G ++ A+++ G + G +Y G L +A+SL +
Sbjct: 42 TEEVMLAGRNIGTLVGIFTMTATWVGGAYINGTAEALYNGGL-LGCQAPVGYAISLVMGG 100
Query: 363 IIYLPVFYNLQITSTYEYLRLRFNQKVRLLGSVIFIIKMLLYIPIVIYVPALAFSQVTGV 542
+++ + + + ++ Q++ L V ++ + ++ S + G+
Sbjct: 101 LLFAKKMREEGYITMLDPFQHKYGQRIGGLMYVPALLGETFWTAAILSALGATLSVILGI 160
Query: 543 NLHLITPIVCIVCIFYTTLGGIKAVVWTDTLQ 638
+++ + + +FYT GG AV +TD +Q
Sbjct: 161 DMNASVTLSACIAVFYTFTGGYYAVAYTDVVQ 192
>AL117207-12|CAD88220.1| 324|Caenorhabditis elegans Hypothetical
protein Y60A3A.22 protein.
Length = 324
Score = 33.1 bits (72), Expect = 0.18
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Frame = +3
Query: 93 WLDYV--VFGAMLLLSSLIGVYFAFFASKKQNTTSEYLMGGKTM-GMFPISMSLIASYIS 263
WL Y G + L +L G+Y F K+ YLM + + + I+++ ++S +
Sbjct: 11 WLIYTYHTIGGVSLCINLFGIYLLTFELKELGAFRYYLMLFQVVCSLADITITTLSSIVP 70
Query: 264 GISLLGLPAEMYTYGTQLWTIVLSEWA-VSLTIAIIYLPVFYNLQITSTYEYLRLRFNQK 440
L + +YG +L+ W VS +I + V+ L++ E L L F +K
Sbjct: 71 LYPLFAIS----SYG------ILALWLDVSAHYCLINVGVWAYLEM----ESLLLCFFKK 116
Query: 441 VRLLGSVIFIIKMLLYIPIVIYVPALAFSQVTGVNLHLIT 560
+ + +I + + +IP Y+ A+ F + V L +T
Sbjct: 117 HQTIAVIIDVHVIPKFIPYFCYLMAIVFPAIPCVGLDFLT 156
>Z81484-6|CAB03968.2| 314|Caenorhabditis elegans Hypothetical
protein C47A10.3 protein.
Length = 314
Score = 31.1 bits (67), Expect = 0.71
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = +3
Query: 285 PAEMYTYGTQLWTIVLSEWAVSLTIAIIYLPVFYNLQITSTYEYLRLRF--NQKVRLLGS 458
PA + T G L IV + V+ + +I + VF + S +R ++ ++L
Sbjct: 179 PAFVVTLGDPL--IVYRQLMVT-ALVVIEMLVFAGILNASMGVEMRKSSGSDRTMKLQKD 235
Query: 459 VIFIIKMLLYIPIVIYVPALAFSQVTGVNLHLITPIVCIVCIFYTTLG 602
+ +K+ + IPIVI + + + VN I I CI+C ++ G
Sbjct: 236 FLRALKLQILIPIVILIIPAIINTILEVNNFHIQGINCIICFIFSAHG 283
>Z81484-1|CAB03967.1| 314|Caenorhabditis elegans Hypothetical
protein C47A10.2 protein.
Length = 314
Score = 30.7 bits (66), Expect = 0.94
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +3
Query: 285 PAEMYTYGTQLWTIVLSEWAVSLTIAIIYLPVFYNLQITSTYEYLRLRFNQK-VRLLGSV 461
PA + T G L IV + V+ + I L L + + E + + + ++L
Sbjct: 179 PAFVVTLGDPL--IVYRQLMVTALVVIEMLVFAGILNASMSVEMRKTSGSDRTMKLQKDF 236
Query: 462 IFIIKMLLYIPIVIYV-PALAFSQVTGVNLHLITPIVCIVCIFYTTLGGIKAVV 620
+ +K+ + IPIVI + P++ S + N+H I C++CI ++ G +++
Sbjct: 237 LRALKLQVLIPIVIIIIPSIIISILDLNNIH-IQGASCLMCIIFSAHGATSSLL 289
>Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical
protein K02B7.2 protein.
Length = 391
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 196 YSEVVFCFLLAKNAKYTPIKDDKSNIAPNTT*SSQSKYTIVMMQ 65
+ + V FL AKY PIK++K + P T Q + T ++++
Sbjct: 32 FKKKVMSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTEIVVK 75
>AF038606-8|AAB92022.2| 313|Caenorhabditis elegans Serpentine
receptor, class z protein60 protein.
Length = 313
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +3
Query: 324 IVLSEWAVSLTIAIIYLPVFYNLQITSTYEYLRLRFNQKVRLLGSVIFIIKMLLYIPIVI 503
+++S+ L A++Y+P+ +++ + QK IF M ++I ++
Sbjct: 181 LLVSQTICILISALLYIPILISVRKLANLASALENNPQKY------IFWQTMTVFIFKLL 234
Query: 504 YVPALAFSQV--TGVNLHLITPIVCIVCIFYTTL 599
Y+PA+AF+ + T +L+L T + C V IF T L
Sbjct: 235 YIPAIAFALLVSTFPSLYLTTSVRC-VDIFTTPL 267
>AF022969-2|AAB69893.2| 354|Caenorhabditis elegans Hypothetical
protein C29G2.4 protein.
Length = 354
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Frame = +3
Query: 102 YVVFGAMLLLSSLIGVYFAFFASKKQNTTSEYLM---GGKTMGMFPISMSLIASY--ISG 266
Y+V LLS + Y A SK + + + LM G + I+ S++A Y +G
Sbjct: 42 YLVVSGTFLLSLYLPCYIAILKSKSRKSPTYRLMLILGSLDLTALFIN-SILAGYYAFNG 100
Query: 267 ISLLGLPAEMYTYGTQLWTIVLSEWAVSLTIAI 365
IS LP M+T G + +S S+ +A+
Sbjct: 101 ISFCQLPIFMFTTGAVTVGLWVSGCFASILMAM 133
>Z81050-8|CAB02859.1| 371|Caenorhabditis elegans Hypothetical
protein C50B6.10 protein.
Length = 371
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 363 IIYLPVFYNLQITSTYEYLRLRFNQKVRLLGSVIFIIKMLLY 488
+++L +FY Q+ Y+YL L F+ + + FI+K + +
Sbjct: 28 LVHLIIFYTKQVFGAYKYLVLSFSLMGIVFATAEFIVKPMTH 69
>Z81047-12|CAB60283.1| 322|Caenorhabditis elegans Hypothetical
protein C41G6.14 protein.
Length = 322
Score = 29.5 bits (63), Expect = 2.2
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 1/162 (0%)
Frame = +3
Query: 51 AHHSNCIMTIVYFDWLDYVVFGAMLLLSSLIGVYFAFFASKKQNTTSEYLMGGKTMGMFP 230
+ +SN + F Y + GA+ ++ + + +YF F S + + YL+G F
Sbjct: 2 SEYSNIEFEVPQFLIHHYYISGAIAVVFNCLVIYFLIFHSGRIGSFKFYLLG------FQ 55
Query: 231 ISMSLIASYISGI-SLLGLPAEMYTYGTQLWTIVLSEWAVSLTIAIIYLPVFYNLQITST 407
IS L+ + + + L L Y L + LS A+ LTI + L ++S
Sbjct: 56 ISCVLLVFHATVLMEPLSLSPICAGYSNGLLSNTLSTHAL-LTI--------FALLVSSQ 106
Query: 408 YEYLRLRFNQKVRLLGSVIFIIKMLLYIPIVIYVPALAFSQV 533
+ L + F QK R VI +K L I +Y + FS V
Sbjct: 107 LDILSICFLQKHR----VIMRLKSLPVISTGMYTSIIVFSIV 144
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 617 NCLYSTKSCVKYTDNANNWCYQVKVYTGYLTERQSRNVNYNWYI 486
NC + + T+ A+ W Y+ K Y G LT S+ + + W I
Sbjct: 368 NCGFGVDKMMAETEEASRWFYKNKEY-GMLTAAASQGLIWRWDI 410
>AL110485-26|CAB60359.3| 779|Caenorhabditis elegans Hypothetical
protein Y46G5A.17 protein.
Length = 779
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +3
Query: 213 TMGMFPISMSLIASYISGISLLGLPAEMYTYGTQLWTIVLSEWAVSLTIAIIY 371
+ G+FP + I YI G LG + G LW I + +S+ + Y
Sbjct: 80 SFGIFPFIQNYIVHYIFGDGYLGQSISIAVAGALLWLIFVQLLRLSIKTLLEY 132
>Z32683-15|CAE17933.2| 375|Caenorhabditis elegans Hypothetical
protein R07E5.17 protein.
Length = 375
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 509 SCSGVQSSNRCKPSLDNTNCLHCLYILHNSWWN 607
+CS +QSS++C + ++ CL +N W N
Sbjct: 84 NCSIIQSSDKCFTVIKSSECLASTQFSYNFWEN 116
>Z82276-4|CAB05241.3| 327|Caenorhabditis elegans Hypothetical
protein K03D3.4 protein.
Length = 327
Score = 28.3 bits (60), Expect = 5.0
Identities = 33/149 (22%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Frame = +3
Query: 78 IVYFDWLDYVVFGAMLLLSSLIGV--YFAFFASKKQNTTSEYLMGGKTMGMFPISMSLIA 251
IVY +++ ++ LL SL+ + +F +F + + T +F + ++ +
Sbjct: 105 IVYV-FIEMIIADVFHLLISLLAMEKFFIYFFPRWEKTVISIQKYIHKYIVF-VYLACCS 162
Query: 252 SYISGISLLGLPAEMYTYGTQLWTIVLSEWAVSLTIAII-YLPVFYNLQITSTYEYLRLR 428
Y+ +++G E Y + L IV + L I+++ Y+PV +++ S + +L
Sbjct: 163 RYMLS-AVIGSSLEPYGWKF-LGPIVQHFLTIILFISVLLYIPVIISVRKLSHLQSAQLS 220
Query: 429 FNQKVRLLGSVI--FIIKMLLYIPIVIYV 509
N + ++G +I F K+L++IP +++
Sbjct: 221 -NPQQYIMGQIIVVFFFKILMFIPDSVHI 248
>Z81489-11|CAJ30223.1| 323|Caenorhabditis elegans Hypothetical
protein C55A1.14 protein.
Length = 323
Score = 28.3 bits (60), Expect = 5.0
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Frame = +3
Query: 231 ISMSLIASYISGISLLGLPAEMYTYGTQLWTIVLSEWAVSLTIAIIYLPVFYNLQITSTY 410
I + +I SY + +L G+ M T +S A+ A++Y+P+ +++ S
Sbjct: 155 IGVIIIVSYFNNKNL-GIAVMMLE--TIFGITSVSFMALIFASALLYIPIMISIRQYSNL 211
Query: 411 EYLRLRFNQKVRLLGS-VIFIIKMLLYIPIVI------YVPALAFSQVTGVNLHLITPIV 569
R+ QK L + V+FI+K + + + I +VP++ F+ +T + TP++
Sbjct: 212 PTARIDQPQKYVLWQTMVVFILKSIYVLILAISMRYGFFVPSI-FTHLTIATDFITTPLI 270
>AL117202-8|CAB57891.1| 547|Caenorhabditis elegans Hypothetical
protein Y47D3A.11 protein.
Length = 547
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 210 KTMGMFPI-SMSLIASYISGISLLGLPAEMYTYGTQLWTIVLSEWAV-SLTIAIIYLPVF 383
K PI ++ I +S L+G P++ + Q++T + EW V +L IA+
Sbjct: 368 KICSFLPIFTVDGIILVVSSYFLVGFPSDFGVFLRQIFTCMAIEWNVAALGIAVCATAPS 427
Query: 384 YNLQITST 407
Y + +T T
Sbjct: 428 YAIAVTVT 435
>U56963-3|AAP31428.1| 312|Caenorhabditis elegans Serpentine
receptor, class v protein28 protein.
Length = 312
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Frame = +3
Query: 318 WTIVLSEWAVSLTIAIIYL-PVFYNLQITSTYEYLRLRFNQKVRLLGSVIFI-----IKM 479
W IVL W V I++I L ++ T E + R L ++I + I +
Sbjct: 133 WQIVLVYWIVPTLISLIVLKDTDFHYDALETMEVVAPRAIITRNTLMALIIVALTCFICV 192
Query: 480 LLYIPIVIYV--PALAFSQVTGVNLHLITPIVCIVCIFY 590
L Y+ + +++ + FS+ LHL ++ ++C F+
Sbjct: 193 LSYLALFLFLRKHSAGFSKNLQRELHLAFQVLALLCAFF 231
>AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical
protein W03G1.3 protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 175 FLLAKNAKYTPIKDDKSNIAPNTT*SSQSKYTIVMMQ 65
FL AKY PIK++K + P T Q + T ++++
Sbjct: 3 FLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTEIVVK 39
>AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical
protein C17B7.13 protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 175 FLLAKNAKYTPIKDDKSNIAPNTT*SSQSKYTIVMMQ 65
FL AKY PIK++K + P T Q + T ++++
Sbjct: 3 FLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTEIVVK 39
>AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical
protein K02E7.2 protein.
Length = 411
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 175 FLLAKNAKYTPIKDDKSNIAPNTT*SSQSKYTIVMMQ 65
FL AKY PIK++K + P T Q + T ++++
Sbjct: 3 FLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTEIVVK 39
>AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical
protein R09E12.5 protein.
Length = 411
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 175 FLLAKNAKYTPIKDDKSNIAPNTT*SSQSKYTIVMMQ 65
FL AKY PIK++K + P T Q + T ++++
Sbjct: 3 FLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTEIVVK 39
>AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical
protein Y55F3C.11 protein.
Length = 355
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 175 FLLAKNAKYTPIKDDKSNIAPNTT*SSQSKYTIVMMQ 65
FL AKY PIK++K + P T Q + T ++++
Sbjct: 3 FLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTEIVVK 39
>AC024090-4|AAK67221.1| 300|Caenorhabditis elegans Hypothetical
protein C52E2.7 protein.
Length = 300
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 315 IVYHTCTSQQVSRVVIYPKCNWL 247
I Y S Q+ R+ ++P+C WL
Sbjct: 65 IFYLNPPSDQIDRIKVFPQCRWL 87
>AC006617-11|AAF39766.2| 356|Caenorhabditis elegans Serpentine
receptor, class z protein56 protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 447 LLGSVIFIIKMLLYIPIVIYVPALA 521
+LG ++ II LLY+PI+I V L+
Sbjct: 194 MLGYILLIISALLYLPIMISVRKLS 218
>U70848-1|AAB09107.2| 434|Caenorhabditis elegans Hypothetical
protein C43G2.1 protein.
Length = 434
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 39 ISFRAHHSNC--IMTIVYFDWLDYVVFGAMLLLSSLIGVYFAFFASKKQNTTSEYLMGGK 212
+SF H +C + + F LDY+ +++ S + +Y+ F+ ++ T Y+
Sbjct: 250 LSFAFHTLSCHSVNVVKIFCKLDYMGISLLIIGSFIPWIYYGFYCRREPKIT--YIAMVS 307
Query: 213 TMGMFPISMSL 245
+G+ I +SL
Sbjct: 308 VLGIGAIVVSL 318
>AF039051-10|AAB94259.3| 313|Caenorhabditis elegans Serpentine
receptor, class i protein73 protein.
Length = 313
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 102 YVVFGAMLLLSSLIGVYFAFFASKKQNTTSEYLM 203
Y + G++ LL +L G+Y F S + ++ YL+
Sbjct: 16 YHIIGSISLLLNLFGIYLLLFKSNQLDSFKYYLL 49
>AF026209-10|AAB71273.2| 355|Caenorhabditis elegans Serpentine
receptor, class i protein4 protein.
Length = 355
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 12/99 (12%)
Frame = +3
Query: 27 DGRAISFRAHHSNCIMTI--VYFDWLDYVVFGAMLLLSSLIGVYFAF---------FASK 173
D + S ++ CI ++ FD+ DY V + LI VY+ + +
Sbjct: 169 DEKNYSMHMNYPGCIHSLDDFTFDFYDYQVNPTFIAFGILISVYYVMAGVIGFGLAWRTG 228
Query: 174 KQNTTSEYLMGGKTMGMFPISMSLIASYISGISL-LGLP 287
+ Y+M +T + S+ + + +SG +L LG+P
Sbjct: 229 QVLNRYRYIMSARTYQLHKSSLITLTTQVSGPTLVLGIP 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,844,668
Number of Sequences: 27780
Number of extensions: 318394
Number of successful extensions: 1102
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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