Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j18f
(653 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3740|AAF47106.2| 331|Drosophila melanogaster CG2827-PA... 293 1e-79
AY118920-1|AAM50780.1| 320|Drosophila melanogaster LD23608p pro... 287 7e-78
BT010249-1|AAQ23567.1| 526|Drosophila melanogaster RE39287p pro... 30 3.2
AY113212-1|AAM29217.1| 510|Drosophila melanogaster AT07117p pro... 30 3.2
AE014297-1183|AAO41541.1| 510|Drosophila melanogaster CG14691-P... 30 3.2
AE014297-1182|AAF54545.2| 522|Drosophila melanogaster CG14691-P... 30 3.2
BT029926-1|ABM92800.1| 563|Drosophila melanogaster IP06983p pro... 29 5.5
AY071297-1|AAL48919.1| 223|Drosophila melanogaster RE32705p pro... 29 5.5
AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p pro... 29 5.5
AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding ... 29 5.5
AE014296-1551|AAN11977.1| 215|Drosophila melanogaster CG5021-PB... 29 5.5
AE014296-1550|AAF50344.2| 218|Drosophila melanogaster CG5021-PA... 29 5.5
AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-P... 29 5.5
>AE013599-3740|AAF47106.2| 331|Drosophila melanogaster CG2827-PA
protein.
Length = 331
Score = 293 bits (719), Expect = 1e-79
Identities = 140/217 (64%), Positives = 171/217 (78%), Gaps = 1/217 (0%)
Frame = +2
Query: 5 MSGEPDTKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQH 184
M + K+ KMS L +LK+ +T+VADTGDFEA+ YKPTDATTNPSLILSA+ ME+YQ
Sbjct: 1 MGSDRTLKKQKMSVLQELKKITTIVADTGDFEAINIYKPTDATTNPSLILSASSMERYQP 60
Query: 185 ILDKAIKYGKDNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIA 364
++ KA++Y K S+ EQVAE +D L VLFG EILK++PGRVS E+DARLSFD S+
Sbjct: 61 LVQKAVEYAKGKKGSVSEQVAEAMDYLCVLFGTEILKVVPGRVSTEIDARLSFDTKKSVE 120
Query: 365 KAIKFINLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAE 544
KA+K I L+ G+ KERILIKLASTWEGI+AA+ LE +HG+HCNLTLLFS QA+ACAE
Sbjct: 121 KALKLIALYKSLGVDKERILIKLASTWEGIKAAEILENEHGVHCNLTLLFSFAQAVACAE 180
Query: 545 ANVTLISPFVGRILDWYVEHT-KKTYEGKEDPGVVSV 652
A VTLISPFVGRILDWYV +T K +E +DPGV+SV
Sbjct: 181 AGVTLISPFVGRILDWYVANTDTKKFEALKDPGVISV 217
>AY118920-1|AAM50780.1| 320|Drosophila melanogaster LD23608p
protein.
Length = 320
Score = 287 bits (705), Expect = 7e-78
Identities = 137/206 (66%), Positives = 166/206 (80%), Gaps = 1/206 (0%)
Frame = +2
Query: 38 MSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKD 217
MS L +LK+ +T+VADTGDFEA+ YKPTDATTNPSLILSA+ ME+YQ ++ KA++Y K
Sbjct: 1 MSVLQELKKITTIVADTGDFEAINIYKPTDATTNPSLILSASSMERYQPLVQKAVEYAKG 60
Query: 218 NGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAE 397
S+ EQVAE +D L VLFG EILK++PGRVS E+DARLSFD S+ KA+K I L+
Sbjct: 61 KKGSVSEQVAEAMDYLCVLFGTEILKVVPGRVSTEIDARLSFDTKKSVEKALKLIALYKS 120
Query: 398 HGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTLISPFVG 577
G+ KERILIKLASTWEGI+AA+ LE +HG+HCNLTLLFS QA+ACAEA VTLISPFVG
Sbjct: 121 LGVDKERILIKLASTWEGIKAAEILENEHGVHCNLTLLFSFAQAVACAEAGVTLISPFVG 180
Query: 578 RILDWYVEHT-KKTYEGKEDPGVVSV 652
RILDWYV +T K +E +DPGV+SV
Sbjct: 181 RILDWYVANTDTKKFEALKDPGVISV 206
>BT010249-1|AAQ23567.1| 526|Drosophila melanogaster RE39287p
protein.
Length = 526
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 65 HSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDNGSSI 232
H V D+GD + YK T + +N S + ++A Q ++ + + G G I
Sbjct: 102 HFLVNKDSGDKSDEENYKATSSNSNESNVQASAHKGDRQKLISEVAQVGDSKGGRI 157
>AY113212-1|AAM29217.1| 510|Drosophila melanogaster AT07117p
protein.
Length = 510
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 286 FTPKKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLILFHTSSREY*AW 140
F KKH +I F L + S+IL + + + V ILF SS ++ W
Sbjct: 146 FHGKKHRPYIMLFVGLCVSIGSMILPLLSYLLLPVPILFTVSSMKFRTW 194
>AE014297-1183|AAO41541.1| 510|Drosophila melanogaster CG14691-PB,
isoform B protein.
Length = 510
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 286 FTPKKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLILFHTSSREY*AW 140
F KKH +I F L + S+IL + + + V ILF SS ++ W
Sbjct: 146 FHGKKHRPYIMLFVGLCVSIGSMILPLLSYLLLPVPILFTVSSMKFRTW 194
>AE014297-1182|AAF54545.2| 522|Drosophila melanogaster CG14691-PA,
isoform A protein.
Length = 522
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 286 FTPKKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLILFHTSSREY*AW 140
F KKH +I F L + S+IL + + + V ILF SS ++ W
Sbjct: 146 FHGKKHRPYIMLFVGLCVSIGSMILPLLSYLLLPVPILFTVSSMKFRTW 194
>BT029926-1|ABM92800.1| 563|Drosophila melanogaster IP06983p
protein.
Length = 563
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -1
Query: 269 HS-AYPKFQPLVLQWSFHYPFH 207
HS ++ +F P+ L++SFHY FH
Sbjct: 114 HSVSFARFVPVALEFSFHYVFH 135
>AY071297-1|AAL48919.1| 223|Drosophila melanogaster RE32705p
protein.
Length = 223
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 277 KKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLI 176
+K+T +F HLFF GA+I++ +F + + I
Sbjct: 33 QKYTHPYVTFFHLFFRGAAILIYMFCGWFSDSFI 66
>AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p
protein.
Length = 1075
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -1
Query: 269 HS-AYPKFQPLVLQWSFHYPFH 207
HS ++ +F P+ L++SFHY FH
Sbjct: 320 HSVSFARFVPVALEFSFHYVFH 341
>AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding
protein 11 protein.
Length = 1075
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -1
Query: 269 HS-AYPKFQPLVLQWSFHYPFH 207
HS ++ +F P+ L++SFHY FH
Sbjct: 320 HSVSFARFVPVALEFSFHYVFH 341
>AE014296-1551|AAN11977.1| 215|Drosophila melanogaster CG5021-PB,
isoform B protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 277 KKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLI 176
+K+T +F HLFF GA+I++ +F + + I
Sbjct: 30 QKYTHPYVTFFHLFFRGAAILIYMFCGWFSDSFI 63
>AE014296-1550|AAF50344.2| 218|Drosophila melanogaster CG5021-PA,
isoform A protein.
Length = 218
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 277 KKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLI 176
+K+T +F HLFF GA+I++ +F + + I
Sbjct: 33 QKYTHPYVTFFHLFFRGAAILIYMFCGWFSDSFI 66
>AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-PA
protein.
Length = 1075
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -1
Query: 269 HS-AYPKFQPLVLQWSFHYPFH 207
HS ++ +F P+ L++SFHY FH
Sbjct: 320 HSVSFARFVPVALEFSFHYVFH 341
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,812,350
Number of Sequences: 53049
Number of extensions: 622869
Number of successful extensions: 1709
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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