Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10j16r
         (540 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55425 Cluster: PREDICTED: hypothetical protein;...    37   0.34 
UniRef50_Q7PPJ9 Cluster: ENSANGP00000011522; n=1; Anopheles gamb...    37   0.34 
UniRef50_Q17JE3 Cluster: Putative uncharacterized protein; n=1; ...    34   2.4  
UniRef50_Q3Y3J9 Cluster: Putative rRNA methylase; n=1; Enterococ...    33   5.6  
UniRef50_UPI0001509E28 Cluster: hypothetical protein TTHERM_0031...    32   7.3  
UniRef50_Q6XLU9 Cluster: FirrV-1-H1; n=1; Feldmannia irregularis...    32   7.3  
UniRef50_A7HLS1 Cluster: Putative uncharacterized protein; n=2; ...    32   7.3  
UniRef50_A2F6K7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.7  
UniRef50_P53880 Cluster: Putative uncharacterized protein YNL179...    32   9.7  

>UniRef50_UPI0000D55425 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 61

 Score = 36.7 bits (81), Expect = 0.34
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -3

Query: 235 VLMAVAITSGVVVVYRMFYAPYVKRKRYQVAEEWANKIIEYEE 107
           V+  V  T+ + + Y  FY P+  R+R Q AEE+AN +++ +E
Sbjct: 19  VIAGVGATAFLWIGYSQFYKPWRSRRRLQEAEEYANVLLKSQE 61


>UniRef50_Q7PPJ9 Cluster: ENSANGP00000011522; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000011522 - Anopheles gambiae
           str. PEST
          Length = 74

 Score = 36.7 bits (81), Expect = 0.34
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = -3

Query: 271 MSRLSGASPLAKVLMAVAITSGVVVVYRMFYAPYVKRKRYQVAEEWANKIIEYEEQTEET 92
           M ++   SP+A V   + +T  ++  YR  Y P++ R+    +E  AN I + E+   + 
Sbjct: 9   MFQMLKGSPVAVVGGTILVTGSLLYTYRAVYRPFITRRERAESEAMANYIFQMEQSKGQR 68

Query: 91  KAS 83
           + S
Sbjct: 69  QTS 71


>UniRef50_Q17JE3 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 77

 Score = 33.9 bits (74), Expect = 2.4
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -3

Query: 274 NMSRLSGASPLAKVLMAVAITSGVVVVYRMFYAPYVKRKRYQVAEEWANKIIEYEEQT 101
           NM R    SP+  +  A+ IT  V+ V +  Y PY  R R   AE  A+ +   E+++
Sbjct: 6   NMYRALRGSPVTLLGGAILITGSVMFVVKRVYEPYKARNRRAEAEYIADYLFRKEQES 63


>UniRef50_Q3Y3J9 Cluster: Putative rRNA methylase; n=1; Enterococcus
           faecium DO|Rep: Putative rRNA methylase - Enterococcus
           faecium DO
          Length = 188

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 201 TTPEVIATAIRTLAKGLAPLRRLIFLIYF-YSTLFSEVDSASLFCS 335
           T PE   TA+  + K L P  RLI ++Y+ +     E+D    FCS
Sbjct: 112 TMPETTRTAMEEILKRLVPRGRLILVVYYGHEGGEKELDMVDSFCS 157


>UniRef50_UPI0001509E28 Cluster: hypothetical protein
           TTHERM_00310250; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00310250 - Tetrahymena
           thermophila SB210
          Length = 524

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 331 QNKLAESTSENRVE*K*IKNMSRLSGASPLAKVLMAVAITSGVVVVY 191
           QN+  ++ S+  V  + IK M R+ G SP+ K+L  + I  G+++ Y
Sbjct: 472 QNQQQQNPSQLDVCIEQIKQMMRMEGKSPICKLLTYINIFLGILIFY 518


>UniRef50_Q6XLU9 Cluster: FirrV-1-H1; n=1; Feldmannia irregularis
           virus a|Rep: FirrV-1-H1 - Feldmannia irregularis virus a
          Length = 923

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 13/41 (31%), Positives = 27/41 (65%)
 Frame = -3

Query: 199 VVYRMFYAPYVKRKRYQVAEEWANKIIEYEEQTEETKASIS 77
           +V  M +APY +   Y+  E+W+ ++I YE++T+++  S +
Sbjct: 150 IVAIMDFAPYTRGMVYRFLEDWSGEVI-YEKKTQDSHKSFA 189


>UniRef50_A7HLS1 Cluster: Putative uncharacterized protein; n=2;
           Thermotogaceae|Rep: Putative uncharacterized protein -
           Fervidobacterium nodosum Rt17-B1
          Length = 212

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = -3

Query: 277 KNMSRLSGASPLAKVLMAVAITSGVVVVYRMFYAPYVKRKRYQVAEEWANKIIEYEEQTE 98
           ++ S   G   L  V+++V ++ G  + YR     Y + K+Y       NK++E  EQ E
Sbjct: 10  RDFSSFFGILFLLIVIVSVVLSLGNFIRYREILQKYDQLKKYV-----DNKVLEMNEQLE 64

Query: 97  ETKASISTSQI 65
           +TK  I  + +
Sbjct: 65  QTKTLIGPNSV 75


>UniRef50_A2F6K7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 461

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 89  FSFFRLLFI-FYDFISPFFSYLIPLSFYVRSVKHSIN 196
           F +F  LF+ F+  ++P  +YL+   FY+  +K  IN
Sbjct: 253 FMYFSTLFLLFFSVLAPLIAYLVWFQFYLYDLKQPIN 289


>UniRef50_P53880 Cluster: Putative uncharacterized protein YNL179C;
           n=2; Eukaryota|Rep: Putative uncharacterized protein
           YNL179C - Saccharomyces cerevisiae (Baker's yeast)
          Length = 145

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = +2

Query: 83  TCFSFFRLLFIFYDFISPFFSYLIPLSFYVRSVKHSINNDDTR 211
           +CFSFF L F+F+ F   FF++   ++F +   K S+N+  T+
Sbjct: 42  SCFSFFFLFFLFFFF---FFTFQFLVAFPILLFKVSLNSTLTK 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,884,754
Number of Sequences: 1657284
Number of extensions: 7519854
Number of successful extensions: 19039
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19029
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)