Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10j16f
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p pro...    30   2.6  
AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA ...    30   2.6  
AE013599-1058|AAF58816.2| 2376|Drosophila melanogaster CG18408-P...    30   2.6  
AB053478-1|BAB62017.1| 2376|Drosophila melanogaster DCAPL1 protein.    30   2.6  
BT010081-1|AAQ22550.1|  524|Drosophila melanogaster LD07278p pro...    29   5.9  
AE014298-689|AAF45992.1|  524|Drosophila melanogaster CG6927-PA ...    29   5.9  
AE014298-524|AAF45870.2|  558|Drosophila melanogaster CG10801-PA...    29   5.9  

>AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p
           protein.
          Length = 307

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +3

Query: 330 SGVVVVYRMFYAPYVKRKRYQVAEEWANKIIEYEEQTEETKASIS 464
           +GVV+    ++ PY       +A+   N++IEYE+ T  T++ ++
Sbjct: 204 AGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQLA 248


>AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA
           protein.
          Length = 307

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +3

Query: 330 SGVVVVYRMFYAPYVKRKRYQVAEEWANKIIEYEEQTEETKASIS 464
           +GVV+    ++ PY       +A+   N++IEYE+ T  T++ ++
Sbjct: 204 AGVVLREGQYFNPYFPGGAISMAQVLYNEVIEYEDGTPPTQSQLA 248


>AE013599-1058|AAF58816.2| 2376|Drosophila melanogaster CG18408-PA,
            isoform A protein.
          Length = 2376

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 384  RYQVAEEWANKIIEYEEQTEETKASIS 464
            R Q+AEEW NK+ E EE+ +     IS
Sbjct: 1654 RQQMAEEWMNKVAEREERRQHKIIRIS 1680


>AB053478-1|BAB62017.1| 2376|Drosophila melanogaster DCAPL1 protein.
          Length = 2376

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 384  RYQVAEEWANKIIEYEEQTEETKASIS 464
            R Q+AEEW NK+ E EE+ +     IS
Sbjct: 1654 RQQMAEEWMNKVAEREERRQHKIIRIS 1680


>BT010081-1|AAQ22550.1|  524|Drosophila melanogaster LD07278p
           protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = -3

Query: 346 TTTTPEVIATAIRTLAKGLAPLRRLIFLIYFYSTLF 239
           TT TP+ IA  I + A+ + PL  L+F ++F++ ++
Sbjct: 487 TTLTPQEIAMWIDSRARFVFPLSFLVFNLFFWTFVY 522


>AE014298-689|AAF45992.1|  524|Drosophila melanogaster CG6927-PA
           protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = -3

Query: 346 TTTTPEVIATAIRTLAKGLAPLRRLIFLIYFYSTLF 239
           TT TP+ IA  I + A+ + PL  L+F ++F++ ++
Sbjct: 487 TTLTPQEIAMWIDSRARFVFPLSFLVFNLFFWTFVY 522


>AE014298-524|AAF45870.2|  558|Drosophila melanogaster CG10801-PA
           protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 402 EWANKIIEYEEQTEETKASISTSQI 476
           +W N + EYE Q EE K  IS +++
Sbjct: 10  QWNNILQEYERQVEEQKQEISPAEV 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,472,462
Number of Sequences: 53049
Number of extensions: 344480
Number of successful extensions: 785
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)