Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j15r
(790 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 56 3e-08
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 51 8e-07
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 51 1e-06
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 51 1e-06
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 50 2e-06
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 48 7e-06
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 45 7e-05
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 41 8e-04
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 38 0.008
At1g79890.1 68414.m09334 helicase-related similar to CHL1 potent... 33 0.22
At5g59590.1 68418.m07467 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.87
At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to vil... 30 1.5
At5g04590.1 68418.m00458 sulfite reductase / ferredoxin (SIR) id... 30 2.0
At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family pr... 30 2.0
At4g14630.1 68417.m02251 germin-like protein (GLP9) identical to... 30 2.0
At1g54010.1 68414.m06153 myrosinase-associated protein, putative... 29 3.5
At5g03390.1 68418.m00292 expressed protein contains Pfam profile... 29 4.6
At1g54000.1 68414.m06152 myrosinase-associated protein, putative... 29 4.6
At1g26110.1 68414.m03186 expressed protein 29 4.6
At3g49670.1 68416.m05429 leucine-rich repeat transmembrane prote... 28 6.1
At3g24110.1 68416.m03027 calcium-binding EF hand family protein ... 28 8.1
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 56.0 bits (129), Expect = 3e-08
Identities = 45/160 (28%), Positives = 70/160 (43%)
Frame = -3
Query: 770 VDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 591
+D+VN+ AYD+Y P ++K TA ++ N N + D+ + W+ G P +K VL
Sbjct: 191 LDWVNIIAYDFYGPVSSSKFTVPTAGLHVSSN-NEGPSGDSGLKQWIKDGLPEKKAVLGF 249
Query: 590 ATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPH 411
+ G W L D + G G ++ V +G ++Y ++ K I +
Sbjct: 250 SYVGWAWTLQNDKD-TGYNAA-AAGVAKSEDDVSEDGSINYAQI-NKFIRDEE------- 299
Query: 410 LRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQK 291
KV DP K G Y F IW+ YED + K
Sbjct: 300 AAKVYDP-KVVGHYCFAKK-------IWIGYEDTQSVEAK 331
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 51.2 bits (117), Expect = 8e-07
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 1/186 (0%)
Frame = -3
Query: 770 VDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 591
+D+VN+ AYD+Y P + A ++ P N P + DA W+ +G P++K VL
Sbjct: 200 LDWVNLMAYDFYGPGWSRVTGP-PAALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLGF 256
Query: 590 ATFGRTWKL-DADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRP 414
+G W+L +A+S H+ G + +G + Y ++ K I N
Sbjct: 257 PYYGYAWRLTNANS--------HSYYAPTTGAAISPDGSIGYGQI-RKFIVDNG------ 301
Query: 413 HLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSL 234
S G Y + G W+ Y+D + K Y K + L G +
Sbjct: 302 --ATTVYNSTVVGDYCY-------AGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGA 352
Query: 233 DDFRGL 216
DD GL
Sbjct: 353 DDNSGL 358
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = -3
Query: 770 VDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 591
+D+VN+ AYD+Y + +++ AP+Y P P + DA V W +G P++K VL
Sbjct: 198 LDWVNLVAYDFYE-SGSSRVTCSPAPLYDPITTGP--SGDAGVRAWTQAGLPAKKAVLGF 254
Query: 590 ATFGRTWKL-DADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEV 459
+G W L DA + H +GP + +G + Y ++
Sbjct: 255 PLYGYAWCLTDAKN--------HNYYANSSGPAISPDGSIGYDQI 291
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 50.8 bits (116), Expect = 1e-06
Identities = 50/192 (26%), Positives = 78/192 (40%)
Frame = -3
Query: 770 VDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 591
+D+VN+ AYD+Y P A +Y Q+ P + D+ V W+ +G P++K VL
Sbjct: 92 LDWVNIKAYDFYGPGCTEVTGP-PAALYL-QSDGP--SGDSGVKDWIDAGLPAEKAVLGF 147
Query: 590 ATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPH 411
+G W L AD P H GP + +G +SY ++ +++ K H
Sbjct: 148 PYYGWAWTL-AD------PKNHGYYVDTTGPAISDDGEISYSQLKTWIVD---NKATTVH 197
Query: 410 LRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLD 231
V G Y + G W+ Y+ ++ K Y K K L G + D
Sbjct: 198 DNIV------IGDYCY-------AGTTWIGYDSEESIVTKVIYAKQKGLLGYFSWQVGGD 244
Query: 230 DFRGLCTGDKYP 195
D L + P
Sbjct: 245 DKSELSSAGSSP 256
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 50.0 bits (114), Expect = 2e-06
Identities = 48/192 (25%), Positives = 79/192 (41%)
Frame = -3
Query: 770 VDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 591
+D++N+ AYD+Y P + A +Y P + ++ D+ V W +G P++K VL
Sbjct: 179 LDWINLMAYDFYGPGWSTVTGP-PASLYLPTDG---RSGDSGVRDWTEAGLPAKKAVLGF 234
Query: 590 ATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPH 411
+G W L AD ++ G T GP + +G +SY ++ +++
Sbjct: 235 PYYGWAWTL-ADPDVNGYDANTT------GPAISDDGEISYRQLQTWIVDNG-------- 279
Query: 410 LRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLD 231
KV D G Y + G W+ Y+ + K Y K K L G + D
Sbjct: 280 ATKVHD-DMMVGDYCY-------AGTTWIGYDSEKSIVTKVIYAKQKGLLGYFSWHVGGD 331
Query: 230 DFRGLCTGDKYP 195
D L + P
Sbjct: 332 DNSELSSAGSTP 343
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 48.0 bits (109), Expect = 7e-06
Identities = 44/171 (25%), Positives = 76/171 (44%)
Frame = -3
Query: 770 VDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 591
+D+VN+ AYD+Y P + A ++ P N ++ D+ ++ WL + P++K VL
Sbjct: 188 LDFVNIMAYDFYGPGWSPVTGP-PAALFDPSNPAG-RSGDSGLSKWLEAKLPAKKAVLGF 245
Query: 590 ATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPH 411
+ G W L+ D+E G TDG + ++G ++Y ++ +I+
Sbjct: 246 SYCGWAWTLE-DAENNGYDAA-TDGAA-----ISSDGSITYAKIRNYIIDNG-------- 290
Query: 410 LRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGG 258
DP+ G Y + G W+ Y+D + K Y K K L G
Sbjct: 291 AATFHDPAV-IGFYCY-------VGTTWIGYDDNQSIVSKVRYAKLKGLLG 333
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = -3
Query: 770 VDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 591
+D+VN+ AY++Y T E A +Y P + P D + +WL +G P +K V
Sbjct: 170 LDWVNLIAYEFYGLTT---EIGPPAGLYDPSIKGPC--GDTGLKHWLKAGLPEKKAVFGF 224
Query: 590 ATFGRTWKLDADSE 549
G +W LD D +
Sbjct: 225 PYVGWSWTLDDDKD 238
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -3
Query: 770 VDYVNVGAYDYYTPTRNNKEADYTAPIYTPQN-RNPLQNADAAVTYWLTSGAPSQKIVLS 594
+D+VN+ AYD+Y+ ++ A ++ P N + P D + W+ +G P++K VL
Sbjct: 189 LDWVNLIAYDFYS---SSTTIGPPAALFDPSNPKGPC--GDYGLKEWIKAGLPAKKAVLG 243
Query: 593 IATFGRTWKLDADSEIA 543
G TW L + ++ A
Sbjct: 244 FPYVGWTWSLGSGNDAA 260
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 37.9 bits (84), Expect = 0.008
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 1/172 (0%)
Frame = -3
Query: 770 VDYVNVGAYDYYTPTRNNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSG-APSQKIVLS 594
+D+VN+ AYD+Y P + A + P N ++ ++ + WL P +K VL
Sbjct: 196 LDFVNIMAYDFYGPGWSPVTGPPAALFHDPSNPAG-RSGNSGLRKWLDEAKLPPKKAVLG 254
Query: 593 IATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRP 414
G W L+ D+E G TDG + +G ++Y ++ +++
Sbjct: 255 FPYCGWAWTLE-DAENNGYDAA-TDGAA-----ISPDGSITYAKIRNYIVDNG------- 300
Query: 413 HLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGG 258
DP+ G Y + G W+ Y+D + K Y K L G
Sbjct: 301 -AATFHDPAV-IGFYCY-------VGNTWIGYDDNQSIVYKVKYAKFTGLLG 343
>At1g79890.1 68414.m09334 helicase-related similar to CHL1 potential
helicase protein (GI:2632247) [Homo sapiens]; similar to
helicase GB:AAB06962 [Homo sapiens]
Length = 882
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = -3
Query: 497 YVKTEGLLSYPEVCGKLINPNQQKGMRPH--LRKVTDPSKRFGTYAFRLPDDNGEGGIWV 324
Y+K ++ G+ + QK H + K+T + F L ++NG+G I +
Sbjct: 466 YIKESNIIHKVSGYGERVAAMLQKDPVAHEEMSKLTS-FRAFSDMLVALTNNNGDGRIII 524
Query: 323 SYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 228
S T+GQ Y+K L G + +D+
Sbjct: 525 SRTSSSTSGQHGGYIKYVMLTGAKLFSEVVDE 556
>At5g59590.1 68418.m07467 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 449
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 289 LLTSSQRISVVSLLWTYHWMTSAVSVPETSIQSLGPLNTVSKI 161
+LT S R+S +H++T S+ E+ +Q+LGP V K+
Sbjct: 42 VLTQSNRVSSSKDFSDFHFLTIPGSLTESDLQNLGPQKFVLKL 84
>At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to villin
2 (VLN2) [Arabidopsis thaliana] GI:3415115
Length = 976
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 178 LAALRIGYLSPVQRPRKSSNDR-STIATPPRFFDLT*AAFWPAVSGSSYDTQMPPSPLSS 354
LAAL + S RP SS DR + PR AA A + SS T+ PP P
Sbjct: 761 LAALNSAFNSSSNRPAYSSQDRLNESHDGPRQRAEALAALSSAFNSSSSSTKSPPPPRPV 820
Query: 355 GRRKA 369
G +A
Sbjct: 821 GTSQA 825
>At5g04590.1 68418.m00458 sulfite reductase / ferredoxin (SIR)
identical to sulfite reductase [Arabidopsis thaliana]
GI:804953, GI:2584721
Length = 642
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 475 SKPSVLTYGPASPGPS---VWIGGTPAISLSASSFQVRPKV 588
++P + G GP+ VW+GGTP ++ A SF + KV
Sbjct: 554 ARPYMAELGLVGDGPNSYQVWLGGTPNLTQIARSFMDKVKV 594
>At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family
protein bHLH protein, Arabidopsis thaliana,
PATCHX:E255557
Length = 589
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 380 FGTYAFRLPDDNGEG--GIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDDFRGLCTG 207
FG++AF L D GE G+W+S + +G AA V + N G + + LC G
Sbjct: 259 FGSWAFNLNPDQGENDPGLWISEPNGVDSGLVAAPVMN-NGGNDSTSNSDSQPISKLCNG 317
>At4g14630.1 68417.m02251 germin-like protein (GLP9) identical to
germin-like protein subfamily 1 member 8 [SP|Q9LEA7]
Length = 222
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 529 IGGTPAISLSASSFQVRPKVAIDNTIF 609
+GGTPA++++A S Q + I NTIF
Sbjct: 167 LGGTPAVAIAALSSQNAGVITIANTIF 193
>At1g54010.1 68414.m06153 myrosinase-associated protein, putative
similar to myrosinase-associated protein GI:1769969 from
[Brassica napus]; contains Pfam profile PF00657:
Lipase/Acylhydrolase with GDSL-like motif
Length = 386
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 761 VNVGAYDYYTPTRNNKEAD-YTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSIAT 585
+ +GA DY T+NN AD T + N L+N D ++ Y +SGA S+ ++ ++A
Sbjct: 156 IYIGANDYLNFTKNNPNADASTQQAFVTSVTNKLKN-DISLLY--SSGA-SKFVIQTLAP 211
Query: 584 FG 579
G
Sbjct: 212 LG 213
>At5g03390.1 68418.m00292 expressed protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 373
Score = 28.7 bits (61), Expect = 4.6
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Frame = +3
Query: 327 PNATLTVVIRKTEGVCSETLAGVSNLPEVRTHSLLLVGVDQLTADFWVTEQTFSLNVWSS 506
P LT + V S V NLP + + + L+A +Q L V SS
Sbjct: 97 PTLYLTNIFNPCASVSSHK---VFNLPPLEDDAKARISSISLSAS--PNQQDCVLAVKSS 151
Query: 507 FAGTISVDWR--DSRNFAVSVQFPGTT----EGRDRQYYLLAWSTAREPVCDSGVGVL 662
+ +S+ WR DS + V FP + GRDR++YLL + E C+ + ++
Sbjct: 152 SSPFLSL-WRPGDSAWTRIKVPFPASNVMMYSGRDRKFYLLPRESKEE--CEGPIDLI 206
>At1g54000.1 68414.m06152 myrosinase-associated protein, putative
similar to myrosinase-associated proteins GI:1769968,
GI:1769970, GI:1216391, GI:1216389 from [Brassica
napus]; contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; contains 1 predicted transmembrane
domain
Length = 391
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -3
Query: 761 VNVGAYDYYTPTRNNKEADYTA-PIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSIAT 585
+ +GA DY T+NN AD +A + N L+N D + Y +SGA S+ ++ ++A
Sbjct: 156 IYIGANDYLNFTKNNPTADASAQQAFVTSVTNKLKN-DISALY--SSGA-SKFVIQTLAP 211
Query: 584 FG 579
G
Sbjct: 212 LG 213
>At1g26110.1 68414.m03186 expressed protein
Length = 611
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 475 SKPSVLTYGPASPGPSVWIGGTPAISLSASSFQVRPK 585
+KPSV+T GP SP + + P +S+S Q +PK
Sbjct: 327 NKPSVVT-GPISPPQTTPLTSAPVAGVSSSISQDKPK 362
>At3g49670.1 68416.m05429 leucine-rich repeat transmembrane protein
kinase, putative CLAVATA1 receptor kinase, Arabidopsis
thaliana, EMBL:ATU96879
Length = 1002
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 606 LLAWSTAREPVCD--SGVGVLQWVAILWGVNRSCVISFFVVACRSV 737
LL T ++PV + GV ++QWV + N+ CV+ + SV
Sbjct: 883 LLELITGKKPVGEFGDGVDIVQWVRSMTDSNKDCVLKVIDLRLSSV 928
>At3g24110.1 68416.m03027 calcium-binding EF hand family protein
contains Pfam profile: PF00036 EF hand, similar to
calcium-modulated proteins
Length = 229
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 710 LLCCCVSECNNRKRQRLHSQL 772
+LCCCV+ NN+K L ++L
Sbjct: 1 MLCCCVNSENNKKYAELDAKL 21
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,626,999
Number of Sequences: 28952
Number of extensions: 406035
Number of successful extensions: 1277
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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