Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j11f
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23648-6|AAA28032.2| 390|Caenorhabditis elegans Hypothetical pr... 81 7e-16
Z49207-8|CAJ85773.1| 455|Caenorhabditis elegans Hypothetical pr... 35 0.060
Z49207-7|CAA89072.1| 512|Caenorhabditis elegans Hypothetical pr... 35 0.060
AC006642-3|AAF39832.2| 410|Caenorhabditis elegans Acyltransfera... 33 0.14
AC006642-2|AAF39831.1| 617|Caenorhabditis elegans Acyltransfera... 33 0.14
Z78410-9|CAB01637.2| 304|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z50806-1|CAA90689.1| 179|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical pr... 29 2.2
U80838-7|AAC71112.3| 581|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical... 28 6.8
AF016433-10|AAB65387.1| 338|Caenorhabditis elegans Seven tm rec... 28 6.8
Z92784-3|CAB07194.1| 318|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL132943-2|CAC14392.1| 367|Caenorhabditis elegans Hypothetical ... 27 9.1
>L23648-6|AAA28032.2| 390|Caenorhabditis elegans Hypothetical
protein F44B9.5 protein.
Length = 390
Score = 81.0 bits (191), Expect = 7e-16
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Frame = +1
Query: 118 LAAEKLINKERFNGENALQF-LLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLT 294
L E L +++R A F ++Y P+G+I+++IR+FLG +I + +L A+
Sbjct: 15 LRIEDLFHQKRNEDTIAKIFSIIYAPVGLIILLIRVFLGFHTFIVACLLRKSAALRMHTL 74
Query: 295 TLACWTFGVYVKLKGQRDPRCSVLVANYVTCFDSLAAAHVFGTISLKRWKLPPFFASTLG 474
+ C G+ V+ G RD VL AN+V+ D LA + + W +P G
Sbjct: 75 RIMCSILGIVVEKSGHRDESARVLCANHVSILDHLAVDILTPCLLPSVWDIPSIIRWCFG 134
Query: 475 ------IKNASQF-SKKQHFSEVPTKPVLIQPESGPTNG-KAVLRFTDWPFQIKSNVQPV 630
+ Q S+ + P+L PE T+G KA+++F W F++ S VQPV
Sbjct: 135 YVDLGATRGRDQLVSRAKQLLTREQMPLLAFPEGIITSGEKALIKFNTWCFEVSSVVQPV 194
Query: 631 AITVERAF 654
++ V R +
Sbjct: 195 SVRVWRPY 202
>Z49207-8|CAJ85773.1| 455|Caenorhabditis elegans Hypothetical
protein R07E3.5b protein.
Length = 455
Score = 34.7 bits (76), Expect = 0.060
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 502 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRA 663
++H ++ P++I PE N +V+ F F+I S + P+A+ + T A
Sbjct: 245 REHVNDENKLPIIIFPEGTCINNTSVMMFKKGSFEIGSTIYPIAVKYDTRLTDA 298
>Z49207-7|CAA89072.1| 512|Caenorhabditis elegans Hypothetical
protein R07E3.5a protein.
Length = 512
Score = 34.7 bits (76), Expect = 0.060
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 502 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRA 663
++H ++ P++I PE N +V+ F F+I S + P+A+ + T A
Sbjct: 302 REHVNDENKLPIIIFPEGTCINNTSVMMFKKGSFEIGSTIYPIAVKYDTRLTDA 355
>AC006642-3|AAF39832.2| 410|Caenorhabditis elegans
Acyltransferase-like protein 4,isoform b protein.
Length = 410
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 502 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAF 654
K+H + P+LI PE N +V+ F F+I + + P+A+ + F
Sbjct: 185 KEHCTNPDKLPILIFPEGTCINNTSVMMFKKGSFEIGTTIYPIAMKYDSRF 235
>AC006642-2|AAF39831.1| 617|Caenorhabditis elegans
Acyltransferase-like protein 4,isoform a protein.
Length = 617
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 502 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAF 654
K+H + P+LI PE N +V+ F F+I + + P+A+ + F
Sbjct: 395 KEHCTNPDKLPILIFPEGTCINNTSVMMFKKGSFEIGTTIYPIAMKYDSRF 445
>Z78410-9|CAB01637.2| 304|Caenorhabditis elegans Hypothetical
protein C51E3.5 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 199 VILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYV 327
+I++ + IF VI+ I + P + H+L TL C G++V
Sbjct: 17 LIIIPVGIFSNVIMIICFFVNPRLRSPFHILLTLTCLADGIHV 59
>Z50806-1|CAA90689.1| 179|Caenorhabditis elegans Hypothetical
protein M79.3 protein.
Length = 179
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 532 PVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAI 636
PVL+ PE +N VL+F F+ N+ PVAI
Sbjct: 9 PVLLFPEGYCSNNSKVLQFRKAIFEENVNIYPVAI 43
>Z29094-7|CAA82342.2| 453|Caenorhabditis elegans Hypothetical
protein C07A9.8 protein.
Length = 453
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 523 PTKPVLIQPESGPTNGKAVLRFTDWPFQI 609
P V+ +P+ P + FTDWPF+I
Sbjct: 7 PKCVVIEEPDDVPVKPPKIFDFTDWPFEI 35
>U80838-7|AAC71112.3| 581|Caenorhabditis elegans Hypothetical
protein F47F6.3 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/90 (22%), Positives = 32/90 (35%)
Frame = +1
Query: 385 CFDSLAAAHVFGTISLKRWKLPPFFASTLGIKNASQFSKKQHFSEVPTKPVLIQPESGPT 564
CF + + F + L+ W+ F + K + +K KP I + T
Sbjct: 114 CFALVLDSFAFNFMFLRLWQFSAGFVALFWSKIEQKLPEKNSEKSETAKPTWISEDDQVT 173
Query: 565 NGKAVLRFTDWPFQIKSNVQPVAITVERAF 654
VL P+ + V +TV AF
Sbjct: 174 VALVVLGVCIMPYDVNVLVIRPLVTVVTAF 203
>AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical
protein C17H12.9 protein.
Length = 459
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 474 TQRRCEKWWQLPSFQTYGTKDMCSCKRIE 388
T RR KW + P FQ + +CKR E
Sbjct: 280 TFRRMAKWLEEPEFQRMSALRLAACKRKE 308
>AF016433-10|AAB65387.1| 338|Caenorhabditis elegans Seven tm
receptor protein 130 protein.
Length = 338
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/99 (20%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +1
Query: 178 LLYLPIGVI-LMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQRDPR 354
++Y I ++ L V+ + IL+ + +L + + +++T+ C +F + +
Sbjct: 52 IIYATIEILTLPVMHLHGSGILFYVNSVLKDHISAGVIISTMYCGSFAFCISMLATH--- 108
Query: 355 CSVLVANYVTCFDSLAAAHVFGTISLKRWKLPPFFASTL 471
+ Y+ + H F I++ W +PPFF T+
Sbjct: 109 ---FIFRYIAVCKN-NKLHYFEGINVYLWLIPPFFFFTI 143
>Z92784-3|CAB07194.1| 318|Caenorhabditis elegans Hypothetical
protein F31C3.4 protein.
Length = 318
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +1
Query: 202 ILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYV 327
+L+++ L + + L +WA SH+L+ ++C GV++
Sbjct: 35 VLLIVLFALTFAAGMIATFLKGEWARSHILSFISCIGGGVFL 76
>AL132943-2|CAC14392.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.5 protein.
Length = 367
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +1
Query: 40 SRIL*KIYGRQRKYSTKHLSTYSVMALAAEKLINKERFNGENALQFLLYLPIGVILMVIR 219
S+I+ Y + TY +A+A + + +F ++Q L+Y G+ +++
Sbjct: 112 SKIVSNYYSSMTNAVVTGMLTYFTVAMAIIRFL-VVKFPFARSMQRLIYSKSGLKILLPI 170
Query: 220 IFLGVILWIASIILPN 267
I L + LWIA I N
Sbjct: 171 IILILPLWIAEISSTN 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,113,994
Number of Sequences: 27780
Number of extensions: 409246
Number of successful extensions: 1096
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -