Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j11f
(665 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11430.1 68416.m01394 phospholipid/glycerol acyltransferase f... 37 0.014
At5g06090.1 68418.m00676 phospholipid/glycerol acyltransferase f... 35 0.056
At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase f... 31 0.91
At4g00400.1 68417.m00054 phospholipid/glycerol acyltransferase f... 30 1.2
At4g34110.1 68417.m04839 polyadenylate-binding protein 2 (PABP2)... 30 1.6
At4g14980.1 68417.m02302 DC1 domain-containing protein contains ... 29 2.1
At5g13230.1 68418.m01520 pentatricopeptide (PPR) repeat-containi... 29 2.8
At3g11325.1 68416.m01377 hypothetical protein 29 3.7
At2g31090.1 68415.m03797 expressed protein 29 3.7
At5g54020.1 68418.m06719 expressed protein 28 4.9
At3g12240.1 68416.m01527 serine carboxypeptidase S10 family prot... 28 6.4
At1g01610.1 68414.m00078 phospholipid/glycerol acyltransferase f... 28 6.4
At5g61950.1 68418.m07776 ubiquitin carboxyl-terminal hydrolase-r... 27 8.5
At3g50170.1 68416.m05485 hypothetical protein contains Pfam prof... 27 8.5
>At3g11430.1 68416.m01394 phospholipid/glycerol acyltransferase
family protein contains Pfam profile: PF01553
acyltransferase
Length = 502
Score = 36.7 bits (81), Expect = 0.014
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 15/181 (8%)
Frame = +1
Query: 166 ALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQ- 342
AL LL++P G+IL VIRIFLG +L + WA T FG ++ +KG+
Sbjct: 237 ALIILLWIPFGIILAVIRIFLGAVLPL--------WA-----TPYVSQIFGGHIIVKGKP 283
Query: 343 -RDPRCS----VLVANYVTCFDSLAAAHVFG------TISLKRWK--LPPFFASTL-GIK 480
+ P + V + T D + ++V G T S+ R L P L I+
Sbjct: 284 PQPPAAGKSGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTVRLTRIR 343
Query: 481 NASQFSKKQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTR 660
+ KQ S+ +++ PE +LRF+ ++ + PVA+ F
Sbjct: 344 DVDAAKIKQQLSK---GDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFH 400
Query: 661 A 663
A
Sbjct: 401 A 401
>At5g06090.1 68418.m00676 phospholipid/glycerol acyltransferase
family protein contains Pfam profile PF01553:
Acyltransferase
Length = 500
Score = 34.7 bits (76), Expect = 0.056
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 8/174 (4%)
Frame = +1
Query: 166 ALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQR 345
AL LL++P G+IL +IRIF+G +L + WA+ + ++ + F V K Q
Sbjct: 235 ALIILLWIPFGIILAMIRIFVGFLLPL--------WAIPY-VSRIFNTRFIVKGKPPAQA 285
Query: 346 DP-RCSVL-VANYVTCFDSLAAAHVFG------TISLKRWKLPPFFASTLGIKNASQFSK 501
VL V + T D + ++V G T S+ R T +
Sbjct: 286 TTGNPGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTFRLTRIRDVDA 345
Query: 502 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRA 663
+ E+ +++ PE +LRF+ ++ N+ PVA+ F A
Sbjct: 346 EMIKKELSNGDLVVYPEGTTCREPFLLRFSALFAELTDNIVPVAMNYRVGFFHA 399
>At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase
family protein contains Pfam PF01553: Acyltransferase
Length = 376
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 502 KQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVERAFTRA 663
+ H + P+LI PE N + F F++ V P+AI + F A
Sbjct: 229 RDHVQGADSNPLLIFPEGTCVNNNYTVMFKKGAFELDCTVCPIAIKYNKIFVDA 282
>At4g00400.1 68417.m00054 phospholipid/glycerol acyltransferase
family protein
Length = 500
Score = 30.3 bits (65), Expect = 1.2
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Frame = +1
Query: 163 NALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQ 342
NA+ L+LP G IL +IR++ ++ LP ++ V + L G+++ ++G
Sbjct: 246 NAIITYLWLPFGFILSIIRVYF-------NLPLPERF-VRYTYEML-----GIHLTIRGH 292
Query: 343 RDPRCS------VLVANYVTCFDSLAAAHVFG------TISLKRWK--LPPFFASTLGIK 480
R P S + V N+ T D + A G T S+ R L P A L
Sbjct: 293 RPPPPSPGTLGNLYVLNHRTALDPIIVAIALGRKICCVTYSVSRLSLMLSPIPAVALTRD 352
Query: 481 NASQFSKKQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVER 648
A+ + + E ++I PE + +LRF+ ++ + PVA+ ++
Sbjct: 353 RATDAANMRKLLE--KGDLVICPEGTTCREEYLLRFSALFAELSDRIVPVAMNCKQ 406
>At4g34110.1 68417.m04839 polyadenylate-binding protein 2 (PABP2)
non-consensus TA donor splice site at exon 2,
polyadenylate-binding protein - Triticum aestivum
(common wheat),PIR:T06979
Length = 443
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = +1
Query: 313 FGVYVKLKGQRDPRCSVLVANYVTCFDSLAAAHVFGTISLKRWKLPPFFASTLGIKNASQ 492
FG K RDP + + +V A +S K + P + + K +
Sbjct: 155 FGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRR 214
Query: 493 FSKKQHFSEVPTKPVLIQPESGP 561
+ FS+V +PV +QP GP
Sbjct: 215 VRLQAQFSQV--RPVAMQPSVGP 235
>At4g14980.1 68417.m02302 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 470
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 452 HFSHRRWV*RTPHNFLKSNISLRCQ 526
HFSH V R N++ N+++RC+
Sbjct: 189 HFSHEEHVLRLDENYVTDNVNMRCR 213
>At5g13230.1 68418.m01520 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 822
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 617 LLLIWNGQSVKRNTALPFVGPLSGCINTGFVGTSEKC 507
+L I + K N L F+G LSGC N G + ++C
Sbjct: 537 ILDIMKDRDCKPN-GLTFLGVLSGCSNAGLIDQGQEC 572
>At3g11325.1 68416.m01377 hypothetical protein
Length = 401
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 166 ALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLAC 306
AL L+++P G++L IRI G ILP W +H ++ L C
Sbjct: 158 ALLILIWIPFGMVLSPIRILSG-------FILP-MWIRTHAMSILGC 196
>At2g31090.1 68415.m03797 expressed protein
Length = 75
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 169 LQFLLYLPIGVILMVIRIFLGVILWIASIIL 261
L FLL LP + +++ I +GVI+WI ++L
Sbjct: 9 LGFLLGLPFAFLSLLLSI-IGVIIWIVGLLL 38
>At5g54020.1 68418.m06719 expressed protein
Length = 556
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 440 GSCHHFSHRRWV*RTPHNFLKSNISLRCQ 526
G HF H V R N++ N+++RC+
Sbjct: 265 GDIVHFCHEEHVLRLDENYVTDNVNMRCR 293
>At3g12240.1 68416.m01527 serine carboxypeptidase S10 family protein
contains Pfam profile: PF00450 serine carboxypeptidase;
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 436
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 623 CTLLLIWNGQSVKRNTALP-FVGPLSGCINTGFVGTSEK 510
C L+LI + S LP F GPL + TG++G +K
Sbjct: 14 CVLVLIQHADSSSIIRYLPGFEGPLPFELETGYIGVGQK 52
>At1g01610.1 68414.m00078 phospholipid/glycerol acyltransferase
family protein similar to unknown protein GI:3335359
from [Arabidopsis thaliana]
Length = 503
Score = 27.9 bits (59), Expect = 6.4
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 14/176 (7%)
Frame = +1
Query: 163 NALQFLLYLPIGVILMVIRIFLGVILWIASIILPNKWAVSHMLTTLACWTFGVYVKLKGQ 342
NAL L+LP G +L V R++ ++ LP ++ V + L G+++ ++G
Sbjct: 247 NALIIYLWLPFGFMLSVFRVYF-------NLPLPERF-VRYTYEIL-----GIHLTIRGH 293
Query: 343 RDPRCS------VLVANYVTCFDSLAAAHVFG------TISLKRWK--LPPFFASTLGIK 480
R P S + V N+ T D + A G T S+ R L P A L
Sbjct: 294 RPPPPSPGKPGNLYVLNHRTALDPIIIAIALGRKITCVTYSVSRLSLMLSPIPAVALTRD 353
Query: 481 NASQFSKKQHFSEVPTKPVLIQPESGPTNGKAVLRFTDWPFQIKSNVQPVAITVER 648
+ ++ + E ++I PE +LRF+ ++ + PVA+ ++
Sbjct: 354 RVADAARMRQLLE--KGDLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQ 407
>At5g61950.1 68418.m07776 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of unknown
function (DUF627)
Length = 1132
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 114 GSCGRKVNQQREIQWRKCIAIFTVFTNWSYSDGDQNI 224
G CG+K I R+C IFT+ W S+ ++ I
Sbjct: 1004 GGCGKKSYVDHII--RRCPPIFTIVLEWEKSETEKEI 1038
>At3g50170.1 68416.m05485 hypothetical protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 541
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 11/58 (18%)
Frame = -3
Query: 486 GVLYTQRRCEKWWQLPSFQTY----------GTKDMCS-CKRIETCHIVSNQHTTSWV 346
GV + +R+ +++W + Y GTK + S E CHI S+ H TS++
Sbjct: 368 GVKFRKRKTDRFWDIEFKNGYLEIPKLLIHDGTKSLFSNLIAFEQCHIESSNHITSYI 425
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,818,767
Number of Sequences: 28952
Number of extensions: 364635
Number of successful extensions: 969
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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