Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10j10r
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.4  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   7.1  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   9.4  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 142 HTKTESNSPYLCGVP 98
           H   + NSPY+ GVP
Sbjct: 136 HGHHQKNSPYMDGVP 150


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 90   LVSFFTTWIFMRMKLPGYLQN*FVS*FCT 4
            +V +FT W + R  L  YL        CT
Sbjct: 1400 IVCYFTNWAWYRKGLGKYLPEDIDPDLCT 1428



 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 90   LVSFFTTWIFMRMKLPGYLQN*FVS*FCT 4
            +V +FT W + R  +  YL +      CT
Sbjct: 1825 VVCYFTNWAWYRQGVGKYLPSDIDPDLCT 1853


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 446 VNGIANSPSISLLLVQICTCYFSR 517
           +NGI  S  +   L+  C  +FS+
Sbjct: 112 LNGIVASSKLRASLISSCLSFFSQ 135


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +2

Query: 140 VVGLCVRSSIMKPSPPSEKRKLDARPSMMY*PLT 241
           V+ LCVR     P P   +      PS  Y P++
Sbjct: 14  VLDLCVRKRPHSPEPYPPRCPPIYEPSCQYSPVS 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,539
Number of Sequences: 336
Number of extensions: 2908
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)