BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j06f
(629 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1773|AAF48168.2| 816|Drosophila melanogaster CG2559-PA... 85 6e-17
U63556-1|AAB58821.1| 789|Drosophila melanogaster larval serum p... 83 4e-16
BT024223-1|ABC86285.1| 789|Drosophila melanogaster LP18812p pro... 83 4e-16
AY069163-1|AAL39308.1| 789|Drosophila melanogaster GH19329p pro... 83 4e-16
AE014134-182|AAF51434.1| 789|Drosophila melanogaster CG4178-PA ... 83 4e-16
AY069748-1|AAL39893.1| 772|Drosophila melanogaster LP08717p pro... 79 5e-15
AF016033-1|AAB71666.1| 711|Drosophila melanogaster larval serum... 79 5e-15
AE014296-2|AAF47324.1| 772|Drosophila melanogaster CG6821-PA pr... 79 5e-15
X97770-1|CAA66371.1| 718|Drosophila melanogaster larval serum p... 71 2e-12
AY119005-1|AAM50865.1| 701|Drosophila melanogaster LP03332p pro... 71 2e-12
AE014296-2095|AAF49958.1| 701|Drosophila melanogaster CG6806-PA... 71 2e-12
AY118687-1|AAM50547.1| 583|Drosophila melanogaster AT15352p pro... 55 9e-08
AE014296-2359|AAF49758.2| 583|Drosophila melanogaster CG8100-PA... 54 2e-07
AE014296-3009|AAF49269.1| 575|Drosophila melanogaster CG7320-PA... 50 2e-06
BT003568-1|AAO39572.1| 1029|Drosophila melanogaster LP01806p pro... 47 2e-05
AY119088-1|AAM50948.1| 1029|Drosophila melanogaster LP11584p pro... 47 2e-05
AE014296-2361|AAN11802.1| 997|Drosophila melanogaster CG17285-P... 47 2e-05
AE014296-2360|AAF49757.2| 1029|Drosophila melanogaster CG17285-P... 47 2e-05
AY061624-1|AAL29172.1| 683|Drosophila melanogaster SD09866p pro... 37 0.026
AE013599-3531|AAF46946.1| 683|Drosophila melanogaster CG2952-PA... 37 0.026
D45835-1|BAA08272.1| 690|Drosophila melanogaster pro-phenol oxi... 34 0.18
AY060617-1|AAL28165.1| 690|Drosophila melanogaster GH04080p pro... 34 0.18
AE014296-2749|AAF49454.2| 1662|Drosophila melanogaster CG32158-P... 34 0.18
AE013599-2589|AAF57775.1| 690|Drosophila melanogaster CG5779-PA... 34 0.18
AB041265-1|BAB17671.1| 337|Drosophila melanogaster prophenoloxi... 34 0.18
U18774-1|AAA89117.1| 1038|Drosophila melanogaster Sog protein. 31 1.3
BT023895-1|ABA81829.1| 1038|Drosophila melanogaster LP20363p pro... 31 1.3
AE014298-2182|AAF48481.1| 1038|Drosophila melanogaster CG9224-PA... 31 1.3
AE014134-2394|ABI31314.1| 1597|Drosophila melanogaster CG31731-P... 29 6.9
>AE014298-1773|AAF48168.2| 816|Drosophila melanogaster CG2559-PA
protein.
Length = 816
Score = 85.4 bits (202), Expect = 6e-17
Identities = 35/72 (48%), Positives = 50/72 (69%)
Frame = +1
Query: 346 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVY 525
+A LF+ FYYAKD+ETF FAR+H N+G F+YA +AVI R D HG V+PA +E++
Sbjct: 105 QARGLFNFFYYAKDWETFMTNVAFARMHFNEGMFVYALTLAVIHRDDFHGLVLPAIHEIF 164
Query: 526 PKMFMNMEVLQK 561
P+ F N + + +
Sbjct: 165 PQFFFNSKFVME 176
>U63556-1|AAB58821.1| 789|Drosophila melanogaster larval serum
protein 1 beta subunitprotein.
Length = 789
Score = 82.6 bits (195), Expect = 4e-16
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +1
Query: 346 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVY 525
+A LF+ FYYAKD+ETF +AR+H+N+G F+YA +AVI R+D HG ++P+ YE++
Sbjct: 105 QARGLFNFFYYAKDWETFAANVAWARMHVNEGMFVYALTMAVIHRNDFHGLMLPSIYEIF 164
Query: 526 PKMFMN 543
P+ F N
Sbjct: 165 PQFFFN 170
>BT024223-1|ABC86285.1| 789|Drosophila melanogaster LP18812p
protein.
Length = 789
Score = 82.6 bits (195), Expect = 4e-16
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +1
Query: 346 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVY 525
+A LF+ FYYAKD+ETF +AR+H+N+G F+YA +AVI R+D HG ++P+ YE++
Sbjct: 105 QARGLFNFFYYAKDWETFAANVAWARMHVNEGMFVYALTMAVIHRNDFHGLMLPSIYEIF 164
Query: 526 PKMFMN 543
P+ F N
Sbjct: 165 PQFFFN 170
>AY069163-1|AAL39308.1| 789|Drosophila melanogaster GH19329p
protein.
Length = 789
Score = 82.6 bits (195), Expect = 4e-16
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +1
Query: 346 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVY 525
+A LF+ FYYAKD+ETF +AR+H+N+G F+YA +AVI R+D HG ++P+ YE++
Sbjct: 105 QARGLFNFFYYAKDWETFAANVAWARMHVNEGMFVYALTMAVIHRNDFHGLMLPSIYEIF 164
Query: 526 PKMFMN 543
P+ F N
Sbjct: 165 PQFFFN 170
>AE014134-182|AAF51434.1| 789|Drosophila melanogaster CG4178-PA
protein.
Length = 789
Score = 82.6 bits (195), Expect = 4e-16
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +1
Query: 346 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVY 525
+A LF+ FYYAKD+ETF +AR+H+N+G F+YA +AVI R+D HG ++P+ YE++
Sbjct: 105 QARGLFNFFYYAKDWETFAANVAWARMHVNEGMFVYALTMAVIHRNDFHGLMLPSIYEIF 164
Query: 526 PKMFMN 543
P+ F N
Sbjct: 165 PQFFFN 170
>AY069748-1|AAL39893.1| 772|Drosophila melanogaster LP08717p
protein.
Length = 772
Score = 79.0 bits (186), Expect = 5e-15
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +1
Query: 346 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVY 525
+A LF+ FYYAKD+ETF + +AR+H+N+G F+YA +AVI + + G ++P YE++
Sbjct: 104 QAYGLFNFFYYAKDWETFVRNVAWARIHVNEGMFVYALTLAVIHKPEFEGLILPQIYEIF 163
Query: 526 PKMFMN 543
P+ F N
Sbjct: 164 PQYFFN 169
>AF016033-1|AAB71666.1| 711|Drosophila melanogaster larval serum
protein 1 gamma protein.
Length = 711
Score = 79.0 bits (186), Expect = 5e-15
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +1
Query: 346 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVY 525
+A LF+ FYYAKD+ETF + +AR+H+N+G F+YA +AVI + + G ++P YE++
Sbjct: 104 QAYGLFNFFYYAKDWETFVRNVAWARIHVNEGMFVYALTLAVIHKPEFEGLILPQIYEIF 163
Query: 526 PKMFMN 543
P+ F N
Sbjct: 164 PQYFFN 169
>AE014296-2|AAF47324.1| 772|Drosophila melanogaster CG6821-PA
protein.
Length = 772
Score = 79.0 bits (186), Expect = 5e-15
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +1
Query: 346 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVY 525
+A LF+ FYYAKD+ETF + +AR+H+N+G F+YA +AVI + + G ++P YE++
Sbjct: 104 QAYGLFNFFYYAKDWETFVRNVAWARIHVNEGMFVYALTLAVIHKPEFEGLILPQIYEIF 163
Query: 526 PKMFMN 543
P+ F N
Sbjct: 164 PQYFFN 169
>X97770-1|CAA66371.1| 718|Drosophila melanogaster larval serum
protein 2 protein.
Length = 718
Score = 70.5 bits (165), Expect = 2e-12
Identities = 31/77 (40%), Positives = 48/77 (62%)
Frame = +1
Query: 328 YDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVP 507
YDK + + L LFY+AK++ETF +AR H+N+ F+YA IA + R D G V+P
Sbjct: 101 YDKHEEYVVGLVRLFYFAKNWETFQHVVYWARQHVNKQLFVYAVTIASLFRDDMQGVVLP 160
Query: 508 APYEVYPKMFMNMEVLQ 558
A YE++P + + + L+
Sbjct: 161 AHYEIHPWSYFDSQALE 177
>AY119005-1|AAM50865.1| 701|Drosophila melanogaster LP03332p
protein.
Length = 701
Score = 70.5 bits (165), Expect = 2e-12
Identities = 31/77 (40%), Positives = 48/77 (62%)
Frame = +1
Query: 328 YDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVP 507
YDK + + L LFY+AK++ETF +AR H+N+ F+YA IA + R D G V+P
Sbjct: 101 YDKHEEYVVGLVRLFYFAKNWETFQHVVYWARQHVNKQLFVYAVTIASLFRDDMQGVVLP 160
Query: 508 APYEVYPKMFMNMEVLQ 558
A YE++P + + + L+
Sbjct: 161 AHYEIHPWSYFDSQALE 177
>AE014296-2095|AAF49958.1| 701|Drosophila melanogaster CG6806-PA
protein.
Length = 701
Score = 70.5 bits (165), Expect = 2e-12
Identities = 31/77 (40%), Positives = 48/77 (62%)
Frame = +1
Query: 328 YDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVP 507
YDK + + L LFY+AK++ETF +AR H+N+ F+YA IA + R D G V+P
Sbjct: 101 YDKHEEYVVGLVRLFYFAKNWETFQHVVYWARQHVNKQLFVYAVTIASLFRDDMQGVVLP 160
Query: 508 APYEVYPKMFMNMEVLQ 558
A YE++P + + + L+
Sbjct: 161 AHYEIHPWSYFDSQALE 177
>AY118687-1|AAM50547.1| 583|Drosophila melanogaster AT15352p
protein.
Length = 583
Score = 54.8 bits (126), Expect = 9e-08
Identities = 24/75 (32%), Positives = 43/75 (57%)
Frame = +1
Query: 331 DKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPA 510
++M + ++ A D+ +F + AC+AR+H + F+ A +AV +R D +PA
Sbjct: 44 EEMPLNLLGIYRFLAMAVDWPSFQRNACYARIHFHPLLFVNALQMAVEEREDTKDLRMPA 103
Query: 511 PYEVYPKMFMNMEVL 555
YEV P+++ MEV+
Sbjct: 104 MYEVLPQLYFEMEVI 118
>AE014296-2359|AAF49758.2| 583|Drosophila melanogaster CG8100-PA
protein.
Length = 583
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/75 (32%), Positives = 42/75 (56%)
Frame = +1
Query: 331 DKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPA 510
++M + ++ A D+ +F + ACFAR+H + F+ A +AV +R D +PA
Sbjct: 44 EEMPLNLLGIYRFLTMAVDWTSFQRNACFARIHFHPLLFVNALQMAVEEREDTKDLRMPA 103
Query: 511 PYEVYPKMFMNMEVL 555
YEV P+++ EV+
Sbjct: 104 MYEVLPQLYFEKEVI 118
>AE014296-3009|AAF49269.1| 575|Drosophila melanogaster CG7320-PA
protein.
Length = 575
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/92 (26%), Positives = 51/92 (55%)
Frame = +1
Query: 286 GLVLCLRI*SSPFFYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYI 465
G +L + +P + D R + + L+ FY A+D+ T ++ +ARVH++ F+ A
Sbjct: 11 GKLLHRNVRYNPLYADHYR-QMLGLYQFFYNARDWYTLWQNISWARVHVHPCIFVQALTQ 69
Query: 466 AVIQRSDCHGFVVPAPYEVYPKMFMNMEVLQK 561
+++R D ++P YE++P+ + + ++K
Sbjct: 70 LILKREDYQALIMPKIYELWPESYHDDVTVRK 101
>BT003568-1|AAO39572.1| 1029|Drosophila melanogaster LP01806p
protein.
Length = 1029
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/69 (27%), Positives = 40/69 (57%)
Frame = +1
Query: 358 LFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVYPKMF 537
++ L A+DF+T + + R ++N + A +A+ R D +VPA E+ P+++
Sbjct: 115 IYRLLARAQDFDTLRRNVVYLRRNINPVLLVNALALAIRDREDTQALIVPAVQELLPELY 174
Query: 538 MNMEVLQKI 564
++ EV+Q++
Sbjct: 175 LDEEVIQQV 183
>AY119088-1|AAM50948.1| 1029|Drosophila melanogaster LP11584p
protein.
Length = 1029
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/69 (27%), Positives = 40/69 (57%)
Frame = +1
Query: 358 LFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVYPKMF 537
++ L A+DF+T + + R ++N + A +A+ R D +VPA E+ P+++
Sbjct: 115 IYRLLARAQDFDTLRRNVVYLRRNINPVLLVNALALAIRDREDTQALIVPAVQELLPELY 174
Query: 538 MNMEVLQKI 564
++ EV+Q++
Sbjct: 175 LDEEVIQQV 183
>AE014296-2361|AAN11802.1| 997|Drosophila melanogaster CG17285-PB,
isoform B protein.
Length = 997
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/69 (27%), Positives = 40/69 (57%)
Frame = +1
Query: 358 LFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVYPKMF 537
++ L A+DF+T + + R ++N + A +A+ R D +VPA E+ P+++
Sbjct: 83 IYRLLARAQDFDTLRRNVVYLRRNINPVLLVNALALAIRDREDTQALIVPAVQELLPELY 142
Query: 538 MNMEVLQKI 564
++ EV+Q++
Sbjct: 143 LDEEVIQQV 151
>AE014296-2360|AAF49757.2| 1029|Drosophila melanogaster CG17285-PA,
isoform A protein.
Length = 1029
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/69 (27%), Positives = 40/69 (57%)
Frame = +1
Query: 358 LFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVYPKMF 537
++ L A+DF+T + + R ++N + A +A+ R D +VPA E+ P+++
Sbjct: 115 IYRLLARAQDFDTLRRNVVYLRRNINPVLLVNALALAIRDREDTQALIVPAVQELLPELY 174
Query: 538 MNMEVLQKI 564
++ EV+Q++
Sbjct: 175 LDEEVIQQV 183
>AY061624-1|AAL29172.1| 683|Drosophila melanogaster SD09866p
protein.
Length = 683
Score = 36.7 bits (81), Expect = 0.026
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +1
Query: 325 FYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVV 504
F R A L +F + + A +AR +N F YA +A++ R D +
Sbjct: 84 FLKSHRKMASHLIEIFTKMQTVDELQSVAVYARDRVNPVLFNYALSVALLHRPDTKDLEL 143
Query: 505 PAPYEVYPKMFMNMEVLQKI 564
PA + +P F++ ++L+ +
Sbjct: 144 PAFAQTFPDRFIDSKMLRSM 163
>AE013599-3531|AAF46946.1| 683|Drosophila melanogaster CG2952-PA
protein.
Length = 683
Score = 36.7 bits (81), Expect = 0.026
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +1
Query: 325 FYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVV 504
F R A L +F + + A +AR +N F YA +A++ R D +
Sbjct: 84 FLKSHRKMASHLIEIFTKMQTVDELQSVAVYARDRVNPVLFNYALSVALLHRPDTKDLEL 143
Query: 505 PAPYEVYPKMFMNMEVLQKI 564
PA + +P F++ ++L+ +
Sbjct: 144 PAFAQTFPDRFIDSKMLRSM 163
>D45835-1|BAA08272.1| 690|Drosophila melanogaster pro-phenol
oxidase A1 protein.
Length = 690
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 325 FYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVV 504
F ++ R+ A L LF A + F + + + +N F YA+ +AV R D +
Sbjct: 87 FNNRHREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAVAVAHRPDTREVPI 146
Query: 505 PAPYEVYPKMFM 540
+++P F+
Sbjct: 147 TNISQIFPSNFV 158
>AY060617-1|AAL28165.1| 690|Drosophila melanogaster GH04080p
protein.
Length = 690
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 325 FYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVV 504
F ++ R+ A L LF A + F + + + +N F YA+ +AV R D +
Sbjct: 87 FNNRHREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAVAVAHRPDTREVPI 146
Query: 505 PAPYEVYPKMFM 540
+++P F+
Sbjct: 147 TNISQIFPSNFV 158
>AE014296-2749|AAF49454.2| 1662|Drosophila melanogaster CG32158-PB,
isoform B protein.
Length = 1662
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -3
Query: 627 VNAILSCGFRINEAILHLCYVNFLQHFHIHKHFRVYFIRSRNNETVAIRAL 475
V+ +S FR+N IL LC + ++ + ++ YF+R + T I AL
Sbjct: 36 VSPSISFWFRLNRIILRLCSTHQFKNLQVEMLYQRYFLRMNQSNTTHILAL 86
>AE013599-2589|AAF57775.1| 690|Drosophila melanogaster CG5779-PA
protein.
Length = 690
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 325 FYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVV 504
F ++ R+ A L LF A + F + + + +N F YA+ +AV R D +
Sbjct: 87 FNNRHREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAVAVAHRPDTREVPI 146
Query: 505 PAPYEVYPKMFM 540
+++P F+
Sbjct: 147 TNISQIFPSNFV 158
>AB041265-1|BAB17671.1| 337|Drosophila melanogaster
prophenoloxidase protein.
Length = 337
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 325 FYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVV 504
F ++ R+ A L LF A + F + + + +N F YA+ +AV R D +
Sbjct: 87 FNNRHREIASELITLFMSAPNLRQFVSLSVYTKDRVNPVLFQYAYAVAVAHRPDTREVPI 146
Query: 505 PAPYEVYPKMFM 540
+++P F+
Sbjct: 147 TNISQIFPSNFV 158
>U18774-1|AAA89117.1| 1038|Drosophila melanogaster Sog protein.
Length = 1038
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 74 QCSTKAEHHKDKKCGCRIC*KAKENS 151
QCS K + DKK C+IC + K++S
Sbjct: 880 QCSEKLAYRPDKKACCKICPEGKQSS 905
>BT023895-1|ABA81829.1| 1038|Drosophila melanogaster LP20363p
protein.
Length = 1038
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 74 QCSTKAEHHKDKKCGCRIC*KAKENS 151
QCS K + DKK C+IC + K++S
Sbjct: 880 QCSEKLAYRPDKKACCKICPEGKQSS 905
>AE014298-2182|AAF48481.1| 1038|Drosophila melanogaster CG9224-PA
protein.
Length = 1038
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 74 QCSTKAEHHKDKKCGCRIC*KAKENS 151
QCS K + DKK C+IC + K++S
Sbjct: 880 QCSEKLAYRPDKKACCKICPEGKQSS 905
>AE014134-2394|ABI31314.1| 1597|Drosophila melanogaster CG31731-PB,
isoform B protein.
Length = 1597
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 181 FSWLTSWKKDRIFFCFSTNT 122
FS++ SW F CFSTNT
Sbjct: 344 FSFVRSWATSLAFVCFSTNT 363
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,363,294
Number of Sequences: 53049
Number of extensions: 535342
Number of successful extensions: 1359
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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