Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10j06f
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          82   5e-18
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      82   5e-18
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          81   1e-17
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      81   1e-17
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          79   5e-17
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      79   5e-17
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    74   1e-15
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    46   2e-07
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   3.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.7  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    21   7.5  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    21   7.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 81.8 bits (193), Expect = 5e-18
 Identities = 37/79 (46%), Positives = 53/79 (67%)
 Frame = +1

Query: 325 FYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVV 504
           +Y ++  E  ALF LFY+AKDF+ F+KTA +A+ ++N+ Q++Y+ Y AVI R D     +
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPDTKFIQL 159

Query: 505 PAPYEVYPKMFMNMEVLQK 561
           P  YE+ P  F N EVLQK
Sbjct: 160 PPLYEMCPYFFFNSEVLQK 178



 Score = 59.3 bits (137), Expect = 3e-11
 Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +3

Query: 105 TKNVDAVFVEKQKKILSFFQDVSQ-LNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKM 281
           TK  D  F+ KQKK+ +    V+Q    +  +Y  G+ ++IE N+D+YTN  AV+EFL +
Sbjct: 26  TKTADKDFLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKEFLSI 85

Query: 282 YRTGFMPKNLEFSVF 326
           Y+ G +P+   FS++
Sbjct: 86  YKHGMLPRGELFSLY 100


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 81.8 bits (193), Expect = 5e-18
 Identities = 37/79 (46%), Positives = 53/79 (67%)
 Frame = +1

Query: 325 FYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVV 504
           +Y ++  E  ALF LFY+AKDF+ F+KTA +A+ ++N+ Q++Y+ Y AVI R D     +
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPDTKFIQL 159

Query: 505 PAPYEVYPKMFMNMEVLQK 561
           P  YE+ P  F N EVLQK
Sbjct: 160 PPLYEMCPYFFFNSEVLQK 178



 Score = 59.3 bits (137), Expect = 3e-11
 Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +3

Query: 105 TKNVDAVFVEKQKKILSFFQDVSQ-LNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKM 281
           TK  D  F+ KQKK+ +    V+Q    +  +Y  G+ ++IE N+D+YTN  AV+EFL +
Sbjct: 26  TKTADKDFLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKEFLSI 85

Query: 282 YRTGFMPKNLEFSVF 326
           Y+ G +P+   FS++
Sbjct: 86  YKHGMLPRGELFSLY 100


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 80.6 bits (190), Expect = 1e-17
 Identities = 38/84 (45%), Positives = 52/84 (61%)
 Frame = +1

Query: 334 KMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAP 513
           +MR +A+ LF L Y AK F+ FY TA +AR ++N+  +LYA  +AVI R D     +P  
Sbjct: 101 EMRHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNEQMYLYALSVAVIHRPDTKLMKLPPM 160

Query: 514 YEVYPKMFMNMEVLQKIYVTKMQD 585
           YEV P ++ N EV+QK Y   M D
Sbjct: 161 YEVMPHLYFNDEVMQKAYNIAMGD 184



 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = +3

Query: 99  IKTKNVDAVFVEKQKKILSFFQDVSQLNT-DDEYYKIGKDYDIEMNMDNYTNKKAVEEFL 275
           +  K  D  +V +QK I   F  V Q      E Y+  + +++  N+DNY +K+AV EF+
Sbjct: 22  VPNKVADKTYVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEFM 81

Query: 276 KMYRTGFMPKNLEFSV 323
           ++ + G +P+   F++
Sbjct: 82  QLLKHGMLPRGQVFTM 97


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 80.6 bits (190), Expect = 1e-17
 Identities = 38/84 (45%), Positives = 52/84 (61%)
 Frame = +1

Query: 334 KMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAP 513
           +MR +A+ LF L Y AK F+ FY TA +AR ++N+  +LYA  +AVI R D     +P  
Sbjct: 101 EMRHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNEQMYLYALSVAVIHRPDTKLMKLPPM 160

Query: 514 YEVYPKMFMNMEVLQKIYVTKMQD 585
           YEV P ++ N EV+QK Y   M D
Sbjct: 161 YEVMPHLYFNDEVMQKAYNIAMGD 184



 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = +3

Query: 99  IKTKNVDAVFVEKQKKILSFFQDVSQLNT-DDEYYKIGKDYDIEMNMDNYTNKKAVEEFL 275
           +  K  D  +V +QK I   F  V Q      E Y+  + +++  N+DNY +K+AV EF+
Sbjct: 22  VPNKVADKTYVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEFM 81

Query: 276 KMYRTGFMPKNLEFSV 323
           ++ + G +P+   F++
Sbjct: 82  QLLKHGMLPRGQVFTM 97


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 78.6 bits (185), Expect = 5e-17
 Identities = 38/81 (46%), Positives = 48/81 (59%)
 Frame = +1

Query: 346 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVY 525
           E   LF L Y AKDF+TFYKTA +AR+ +N G F  AF IAV+ R D      PA YE+Y
Sbjct: 107 EVRMLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPDTKYMKFPAIYEIY 166

Query: 526 PKMFMNMEVLQKIYVTKMQDG 588
           P  F +  V+++    KM  G
Sbjct: 167 PNYFFDSSVIEEAQNLKMSRG 187



 Score = 58.0 bits (134), Expect = 7e-11
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = +3

Query: 117 DAVFVEKQKKILSFFQDVSQLNTDD-EYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTG 293
           D  F+ KQKKI      V Q +  D E+Y +G++YD+E NMD Y +K  V++FL  Y+ G
Sbjct: 29  DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKNVVQKFLWWYKQG 88

Query: 294 -FMPKNLEFS 320
            F+ +N  F+
Sbjct: 89  MFLSRNAIFT 98


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 78.6 bits (185), Expect = 5e-17
 Identities = 38/81 (46%), Positives = 48/81 (59%)
 Frame = +1

Query: 346 EAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVY 525
           E   LF L Y AKDF+TFYKTA +AR+ +N G F  AF IAV+ R D      PA YE+Y
Sbjct: 107 EVRMLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPDTKYMKFPAIYEIY 166

Query: 526 PKMFMNMEVLQKIYVTKMQDG 588
           P  F +  V+++    KM  G
Sbjct: 167 PNYFFDSSVIEEAQNLKMSRG 187



 Score = 58.0 bits (134), Expect = 7e-11
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = +3

Query: 117 DAVFVEKQKKILSFFQDVSQLNTDD-EYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTG 293
           D  F+ KQKKI      V Q +  D E+Y +G++YD+E NMD Y +K  V++FL  Y+ G
Sbjct: 29  DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKNVVQKFLWWYKQG 88

Query: 294 -FMPKNLEFS 320
            F+ +N  F+
Sbjct: 89  MFLSRNAIFT 98


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 73.7 bits (173), Expect = 1e-15
 Identities = 32/76 (42%), Positives = 49/76 (64%)
 Frame = +1

Query: 334 KMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAP 513
           ++R E   L+ +   AKD++TF KTA +ARVH+N+GQFL AF  AV+ R D    + P  
Sbjct: 99  QLRKEVSLLYRILLGAKDYQTFLKTAAWARVHVNEGQFLKAFVAAVLTRQDTQSVIFPPV 158

Query: 514 YEVYPKMFMNMEVLQK 561
           YE+ P+  ++  V+Q+
Sbjct: 159 YEILPQHHLDSRVIQE 174



 Score = 39.9 bits (89), Expect = 2e-05
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +3

Query: 99  IKTKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLK 278
           +K +  D   + KQ+ ++   Q +SQ   + E   +G  YDIE N   Y N   V  +  
Sbjct: 20  VKQRAADQDLLNKQQDVIQLLQKISQPIPNQELQNLGASYDIESNSHQYKNPIIVMYYAG 79

Query: 279 MYRTGFM-PKNLEFS 320
             + G + P+   FS
Sbjct: 80  AVKAGLVQPQGTTFS 94


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 46.4 bits (105), Expect = 2e-07
 Identities = 23/79 (29%), Positives = 36/79 (45%)
 Frame = +1

Query: 325 FYDKMRDEAIALFHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVV 504
           F    R  A  L  +F   + +E F   A + R  LN   F+YA  +A++ R D     V
Sbjct: 85  FIPAHRKIAARLIDIFMGMRTYEDFLSVAVYCRDRLNPNLFIYALSVAILHRPDTKDLPV 144

Query: 505 PAPYEVYPKMFMNMEVLQK 561
           P   EV+P  +M+  +  +
Sbjct: 145 PPLTEVFPDKYMDSGIFSR 163


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 17  AGNHEVCLNSGWACSRRAQQCSTKAEHHKDKK 112
           AGN+E   +SG A S R    ++  EH  + +
Sbjct: 256 AGNNEDSSDSGAAASDRPPASASSNEHEAESE 287


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +3

Query: 153 SFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKM--YRTGFMPKNLEFSV 323
           SFF  VS  +   E Y    D  +  ++++Y N+     F+ +  Y  G    NL  +V
Sbjct: 98  SFFSSVSPTSLGSENYTGISDLFVFDDLNDYINRLNYSAFVNLTAYYDGGANLNLNGTV 156


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 603 FRINEAILHLCYVNFLQHFHIHKHFRVYFI 514
           ++ N  ILH+ + ++ + F      R YFI
Sbjct: 94  YKWNNQILHILWTSYKKVFMKDNILRQYFI 123


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 603 FRINEAILHLCYVNFLQHFHIHKHFRVYFI 514
           ++ N  ILH+ + ++ + F      R YFI
Sbjct: 77  YKWNNQILHILWTSYKKVFMKDNILRQYFI 106


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 162 QDVSQLNTDDEYYKIGKDYD 221
           Q V ++ T++E  K GK+YD
Sbjct: 524 QYVGEVITNEEAEKRGKEYD 543


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 204 IGKDYDIEMNMDNYTNKKAVEEFLKMYR 287
           IGKDY + M   + +++  +E   ++Y+
Sbjct: 479 IGKDYSLPMVNHSKSSRINIERMKQVYQ 506


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,112
Number of Sequences: 438
Number of extensions: 3257
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)