Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10j04r
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   6.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.6  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 549 VNVPFFVSLHIIPSAAIHSTSASPSDGISFPF 644
           ++VPF+     + S + H   A  + GI+ PF
Sbjct: 244 LSVPFYGHSWYLQSTSNHDVGAPATTGIAGPF 275


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 44  NV*HFLNIKCMYKSNSIV 97
           N+ HF ++KC  +S S++
Sbjct: 344 NMEHFFSVKCSIQSESLL 361


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 644 YTSSELLCVWIYLIN 688
           +TSS +  +W++LIN
Sbjct: 124 HTSSYMTGIWVWLIN 138


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 644 YTSSELLCVWIYLIN 688
           +TSS +  +W++LIN
Sbjct: 357 HTSSYMTGIWVWLIN 371


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 644 YTSSELLCVWIYLIN 688
           +TSS +  +W++LIN
Sbjct: 357 HTSSYMTGIWVWLIN 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,823
Number of Sequences: 336
Number of extensions: 5150
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)