Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10j04r
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967...    29   4.3  
05_02_0031 - 5832475-5832696,5832789-5833064,5833303-5833380,583...    29   4.3  
04_04_0439 - 25207950-25209629                                         29   4.3  
01_06_0139 + 26878820-26879725                                         28   7.6  
09_06_0008 - 20168429-20170054                                         28   10.0 
08_01_0272 + 2200061-2200078,2200835-2202076,2202201-2202698,220...    28   10.0 
01_06_1372 + 36726129-36728240                                         28   10.0 

>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
            16196822-16197001,16197090-16197371,16197471-16199141,
            16199257-16199463,16199566-16199700,16199792-16200082,
            16200403-16200621,16200876-16201034,16201120-16201181,
            16201257-16201383,16201460-16201693,16201777-16202003,
            16202163-16202257,16202341-16202468,16202574-16202594,
            16202765-16202921,16203007-16203075,16203228-16203341,
            16203415-16203491,16203576-16203688,16204432-16204507,
            16204592-16204756,16204825-16204952,16205049-16205130,
            16205426-16205548,16205633-16205860,16205933-16206034,
            16206144-16206341,16206581-16206760,16206868-16207020,
            16207690-16207797,16208201-16208355,16208786-16208912,
            16209825-16209914,16209986-16210127,16210303-16210379,
            16210467-16210582,16210638-16210773,16211130-16211198,
            16211279-16211361,16211655-16211720,16211788-16211974,
            16212054-16213547,16213635-16214165,16214234-16214363,
            16214407-16215878,16216359-16216364,16216750-16217055,
            16217364-16217468,16217577-16217772,16217862-16217929,
            16218853-16220631,16221026-16221151,16221604-16221780,
            16221997-16222128,16223461-16223498,16223710-16223788,
            16224175-16224284,16224787-16224935,16225027-16225197,
            16225281-16225552,16226355-16226442,16227942-16228369
          Length = 5157

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 640  GKEIPSEGEAEVECIAADGIICNETKNGTF 551
            G ++P EGE  +E   +DGI+    KNG++
Sbjct: 1686 GSDLPVEGENGMEFAWSDGILLQALKNGSW 1715


>05_02_0031 -
           5832475-5832696,5832789-5833064,5833303-5833380,
           5833464-5833550,5833639-5833699,5833792-5833880,
           5834001-5834098,5834197-5834296,5834876-5834953
          Length = 362

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -2

Query: 306 ELLLFGVIMRLTYYHNQIGITSPDSGEQYPSKLMRIMSGLNVFLYLCDVGHY 151
           E L   V++ L YY+   G+      ++Y SKL+    G N++ +L  +  Y
Sbjct: 166 EWLYNKVLLNLIYYYGTRGLVKECLLQRYFSKLLDERQGENIWRFLHSINEY 217


>04_04_0439 - 25207950-25209629
          Length = 559

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 688 IDQIDPDTQQFRGCIKGKEIPSEGEAEVECIAADGIICNETKNG 557
           +D + P  ++ R C  G+    +G   VEC+  DG    E   G
Sbjct: 174 LDALRPMEERARACYDGRVAGMQGNELVECLVLDGTFVLELFRG 217


>01_06_0139 + 26878820-26879725
          Length = 301

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = -1

Query: 553 FTRKLPCKWTNGYSLEIALLLSVFLGMFGLDRFYLGYPGMGLAKLCTLGFMFLGQLLDII 374
           F    PC++ NG +  +    + + G      FY+G P    A     G++  G L   +
Sbjct: 210 FYNNPPCQYANGDASNLVSAWNTWTGGVSAGSFYVGVPAAEAA--AGSGYVAPGDLTSAV 267

Query: 373 LIAAQ 359
           L A Q
Sbjct: 268 LPAVQ 272


>09_06_0008 - 20168429-20170054
          Length = 541

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 517 YSLEIALLLSVFLGMFGLDRFYLGYPGMGLAKLCT 413
           Y+   ALLL V + +  +DR  LG  G+ L  +CT
Sbjct: 200 YAAAAALLLHVPINVVLVDRLGLGIRGVALGAVCT 234


>08_01_0272 +
           2200061-2200078,2200835-2202076,2202201-2202698,
           2203316-2203345
          Length = 595

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 354 WDLQMGLLMSFHIMVLELLLFGVIMRLT 271
           W++Q+ +L+SF + V  LLL G+  R T
Sbjct: 11  WEIQVLVLVSFSLQVFLLLLSGIRKRTT 38


>01_06_1372 + 36726129-36728240
          Length = 703

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 488 CIPGNVWIGSLLFGISWNGFSKTMYS 411
           CIP  V  G+L+ G+  NGF+   ++
Sbjct: 400 CIPDTVTFGTLIHGLCQNGFANKAFT 425


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,123,767
Number of Sequences: 37544
Number of extensions: 499063
Number of successful extensions: 1144
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)