Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j04f
(566 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 24 1.0
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 23 1.4
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 23 1.8
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 4.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 4.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 4.2
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 21 5.6
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 7.3
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 7.3
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 9.7
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 23.8 bits (49), Expect = 1.0
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +2
Query: 86 LGSTSQSKLISICNLKPYCSANVLLQMMKLVHSVHVYVCLVF--LLSITEASDEAKVDK- 256
LG+TS ++ L P C++N + + ++ ++C F L+ + +D +
Sbjct: 243 LGTTSSCTFDNLEELGPVCNSNNIWLHVDAAYAGSSFICPEFRYLMKGIDRADSFNFNPH 302
Query: 257 ----VHVDCSTLRL 286
V+ DCST+ L
Sbjct: 303 KWLLVNFDCSTMWL 316
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 23.4 bits (48), Expect = 1.4
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 424 YYSISCYTLHFGFTFGRNFLSFYTSSELLCVW-IYLINTWVWTNKLSQS*RTAVYMHFIN 248
++ +S F FG L + S L+ I++I V + K+ V++H +
Sbjct: 226 HHHLSKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVICVLVQSEKI-------VWLHLVY 278
Query: 247 FSFIGSFC 224
SF+G C
Sbjct: 279 ISFLGIIC 286
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 453 VNVPFFVSLHIIPSAAIHSTSASPSDGISFPF 358
++VPF+ + S + H A + GI+ PF
Sbjct: 244 LSVPFYGHSWYLQSTSNHDVGAPATTGIAGPF 275
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 358 YTSSELLCVWIYLIN 314
+TSS + +W++LIN
Sbjct: 124 HTSSYMTGIWVWLIN 138
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 358 YTSSELLCVWIYLIN 314
+TSS + +W++LIN
Sbjct: 357 HTSSYMTGIWVWLIN 371
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 358 YTSSELLCVWIYLIN 314
+TSS + +W++LIN
Sbjct: 357 HTSSYMTGIWVWLIN 371
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.4 bits (43), Expect = 5.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 303 GQINCPNLNVLQSTCTLSTLASSEASVIDS 214
GQ+ N N+L+S C L S + +S
Sbjct: 181 GQLKAQNSNLLKSVCADLCLLSECVDLFNS 210
Score = 21.4 bits (43), Expect = 5.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 200 IRRRVQNVQVSSFAITHSQNNTVLNCKWKLV 108
IRR + NVQV ++ I + + + K+V
Sbjct: 269 IRREIANVQVLAYKIEAKRRDNEIKMFVKIV 299
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 7.3
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -2
Query: 268 VYMHFINFSFIGSFC 224
V++H + SF+G C
Sbjct: 991 VWLHLVYISFLGIIC 1005
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory
receptor candidate 19 protein.
Length = 355
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 92 NLRRIFYYFIKNLKGN 45
NLRRI+Y++ ++ N
Sbjct: 52 NLRRIYYFYCVSITFN 67
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.6 bits (41), Expect = 9.7
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -3
Query: 423 IIPSAAIHSTSASPSDG 373
++PS +H P DG
Sbjct: 179 VLPSGELHIRDVGPEDG 195
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,868
Number of Sequences: 336
Number of extensions: 3263
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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