Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j04f
(566 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029486-1|AAH29486.1| 207|Homo sapiens TM2 domain containing 1... 66 1e-10
AF353990-1|AAK35064.1| 207|Homo sapiens beta-amyloid binding pr... 66 1e-10
BC008873-1|AAH08873.1| 221|Homo sapiens TM2 domain containing 3... 54 5e-07
BC006150-1|AAH06150.1| 247|Homo sapiens TM2 domain containing 3... 54 5e-07
AK026257-1|BAB15415.1| 221|Homo sapiens protein ( Homo sapiens ... 54 5e-07
AF353992-1|AAK35066.1| 221|Homo sapiens BBP-like protein 2 prot... 54 5e-07
AL512689-1|CAC21647.1| 80|Homo sapiens hypothetical protein pr... 52 1e-06
BC109050-1|AAI09051.1| 214|Homo sapiens TM2 domain containing 2... 51 3e-06
BC109049-1|AAI09050.1| 214|Homo sapiens TM2 domain containing 2... 51 3e-06
BC004878-1|AAH04878.2| 171|Homo sapiens TM2 domain containing 2... 51 3e-06
AK075155-1|BAC11437.1| 171|Homo sapiens protein ( Homo sapiens ... 51 3e-06
AK075027-1|BAC11359.1| 171|Homo sapiens protein ( Homo sapiens ... 51 3e-06
AF353991-1|AAK35065.1| 214|Homo sapiens BBP-like protein 1 prot... 51 3e-06
BC026066-1|AAH26066.1| 731|Homo sapiens ASCC3 protein protein. 30 6.5
AL833964-1|CAD38812.1| 1081|Homo sapiens hypothetical protein pr... 29 8.6
AL590431-1|CAH71259.1| 1888|Homo sapiens nuclear pore membrane g... 29 8.6
AL513546-1|CAH70552.1| 1888|Homo sapiens nuclear pore membrane g... 29 8.6
AL358472-1|CAI14015.1| 1888|Homo sapiens nuclear pore membrane g... 29 8.6
AK128108-1|BAC87279.1| 1423|Homo sapiens protein ( Homo sapiens ... 29 8.6
AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens ... 29 8.6
AK125924-1|BAC86345.1| 1591|Homo sapiens protein ( Homo sapiens ... 29 8.6
>BC029486-1|AAH29486.1| 207|Homo sapiens TM2 domain containing 1
protein.
Length = 207
Score = 65.7 bits (153), Expect = 1e-10
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Frame = +2
Query: 269 CSTLRLGQFICPNPSIDQIDPDTQQFRGCIKGKEIPSEGEAEVECIAADGIICNETK-NG 445
C L++GQ+IC +P I+ TQ+ C + A V C A I C ++ N
Sbjct: 48 CEDLKVGQYICKDPKINDA---TQEPVNC-------TNYTAHVSCFPAPNITCKDSSGNE 97
Query: 446 T--------FTRKLPCKWTNGYSLEIALLLSVFLGMFGLDRFYLGYP 562
T F + + C+ NGYS ++A+ LS+FLG G DRFYLGYP
Sbjct: 98 THFTGNEVGFFKPISCRNVNGYSYKVAVALSLFLGWLGADRFYLGYP 144
>AF353990-1|AAK35064.1| 207|Homo sapiens beta-amyloid binding
protein precursor protein.
Length = 207
Score = 65.7 bits (153), Expect = 1e-10
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Frame = +2
Query: 269 CSTLRLGQFICPNPSIDQIDPDTQQFRGCIKGKEIPSEGEAEVECIAADGIICNETK-NG 445
C L++GQ+IC +P I+ TQ+ C + A V C A I C ++ N
Sbjct: 48 CEDLKVGQYICKDPKINDA---TQEPVNC-------TNYTAHVSCFPAPNITCKDSSGNE 97
Query: 446 T--------FTRKLPCKWTNGYSLEIALLLSVFLGMFGLDRFYLGYP 562
T F + + C+ NGYS ++A+ LS+FLG G DRFYLGYP
Sbjct: 98 THFTGNEVGFFKPISCRNVNGYSYKVAVALSLFLGWLGADRFYLGYP 144
>BC008873-1|AAH08873.1| 221|Homo sapiens TM2 domain containing 3
protein.
Length = 221
Score = 53.6 bits (123), Expect = 5e-07
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = +2
Query: 401 CIAADGIICNETKNGTFTRKLPCKWTNGYSLEIALLLSVFLGMFGLDRFYLG 556
C D + C N TF + L C WT GY AL LS+ LG FG DRFYLG
Sbjct: 132 CTVRDHVHC--LGNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLG 181
>BC006150-1|AAH06150.1| 247|Homo sapiens TM2 domain containing 3
protein.
Length = 247
Score = 53.6 bits (123), Expect = 5e-07
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = +2
Query: 401 CIAADGIICNETKNGTFTRKLPCKWTNGYSLEIALLLSVFLGMFGLDRFYLG 556
C D + C N TF + L C WT GY AL LS+ LG FG DRFYLG
Sbjct: 158 CTVRDHVHC--LGNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLG 207
>AK026257-1|BAB15415.1| 221|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22604 fis, clone HSI04630. ).
Length = 221
Score = 53.6 bits (123), Expect = 5e-07
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = +2
Query: 401 CIAADGIICNETKNGTFTRKLPCKWTNGYSLEIALLLSVFLGMFGLDRFYLG 556
C D + C N TF + L C WT GY AL LS+ LG FG DRFYLG
Sbjct: 132 CTVRDHVHC--LGNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLG 181
>AF353992-1|AAK35066.1| 221|Homo sapiens BBP-like protein 2
protein.
Length = 221
Score = 53.6 bits (123), Expect = 5e-07
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = +2
Query: 401 CIAADGIICNETKNGTFTRKLPCKWTNGYSLEIALLLSVFLGMFGLDRFYLG 556
C D + C N TF + L C WT GY AL LS+ LG FG DRFYLG
Sbjct: 132 CTVRDHVHC--LGNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLG 181
>AL512689-1|CAC21647.1| 80|Homo sapiens hypothetical protein
protein.
Length = 80
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/39 (58%), Positives = 25/39 (64%)
Frame = +2
Query: 440 NGTFTRKLPCKWTNGYSLEIALLLSVFLGMFGLDRFYLG 556
N TF + L C WT GY AL LS+ LG FG DRFYLG
Sbjct: 2 NRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLG 40
>BC109050-1|AAI09051.1| 214|Homo sapiens TM2 domain containing 2
protein.
Length = 214
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 350 GCIK-GKEIPSEGE-AEVECIAADGIICNETKNGTFTRK-LPCKWTNGYSLEIALLLSVF 520
GC+K G + S+ E V+C A DGI C + TF R+ PC G+ LL S F
Sbjct: 102 GCLKFGGQAYSDVEHTSVQCHALDGIECASPR--TFLRENKPCIKYTGHYFITTLLYSFF 159
Query: 521 LGMFGLDRFYLGYPG 565
LG FG+DRF LG+ G
Sbjct: 160 LGCFGVDRFCLGHTG 174
>BC109049-1|AAI09050.1| 214|Homo sapiens TM2 domain containing 2
protein.
Length = 214
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 350 GCIK-GKEIPSEGE-AEVECIAADGIICNETKNGTFTRK-LPCKWTNGYSLEIALLLSVF 520
GC+K G + S+ E V+C A DGI C + TF R+ PC G+ LL S F
Sbjct: 102 GCLKFGGQAYSDVEHTSVQCHALDGIECASPR--TFLRENKPCIKYTGHYFITTLLYSFF 159
Query: 521 LGMFGLDRFYLGYPG 565
LG FG+DRF LG+ G
Sbjct: 160 LGCFGVDRFCLGHTG 174
>BC004878-1|AAH04878.2| 171|Homo sapiens TM2 domain containing 2
protein.
Length = 171
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 350 GCIK-GKEIPSEGE-AEVECIAADGIICNETKNGTFTRK-LPCKWTNGYSLEIALLLSVF 520
GC+K G + S+ E V+C A DGI C + TF R+ PC G+ LL S F
Sbjct: 59 GCLKFGGQAYSDVEHTSVQCHALDGIECASPR--TFLRENKPCIKYTGHYFITTLLYSFF 116
Query: 521 LGMFGLDRFYLGYPG 565
LG FG+DRF LG+ G
Sbjct: 117 LGCFGVDRFCLGHTG 131
>AK075155-1|BAC11437.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ90674 fis, clone PLACE1005660, highly similar to
BBP-like protein 1 isoform a. ).
Length = 171
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 350 GCIK-GKEIPSEGE-AEVECIAADGIICNETKNGTFTRK-LPCKWTNGYSLEIALLLSVF 520
GC+K G + S+ E V+C A DGI C + TF R+ PC G+ LL S F
Sbjct: 59 GCLKFGGQAYSDVEHTSVQCHALDGIECASPR--TFLRENKPCIKYTGHYFITTLLYSFF 116
Query: 521 LGMFGLDRFYLGYPG 565
LG FG+DRF LG+ G
Sbjct: 117 LGCFGVDRFCLGHTG 131
>AK075027-1|BAC11359.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ90546 fis, clone OVARC1000439, highly similar to
BBP-like protein 1 isoform a. ).
Length = 171
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 350 GCIK-GKEIPSEGE-AEVECIAADGIICNETKNGTFTRK-LPCKWTNGYSLEIALLLSVF 520
GC+K G + S+ E V+C A DGI C + TF R+ PC G+ LL S F
Sbjct: 59 GCLKFGGQAYSDVEHTSVQCHALDGIECASPR--TFLRENKPCIKYTGHYFITTLLYSFF 116
Query: 521 LGMFGLDRFYLGYPG 565
LG FG+DRF LG+ G
Sbjct: 117 LGCFGVDRFCLGHTG 131
>AF353991-1|AAK35065.1| 214|Homo sapiens BBP-like protein 1
protein.
Length = 214
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 350 GCIK-GKEIPSEGE-AEVECIAADGIICNETKNGTFTRK-LPCKWTNGYSLEIALLLSVF 520
GC+K G + S+ E V+C A DGI C + TF R+ PC G+ LL S F
Sbjct: 102 GCLKFGGQAYSDVEHTSVQCHALDGIECASPR--TFLRENKPCIKYTGHYFITTLLYSFF 159
Query: 521 LGMFGLDRFYLGYPG 565
LG FG+DRF LG+ G
Sbjct: 160 LGCFGVDRFCLGHTG 174
>BC026066-1|AAH26066.1| 731|Homo sapiens ASCC3 protein protein.
Length = 731
Score = 29.9 bits (64), Expect = 6.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 83 FLGSTSQSKLISICNLKPYCSANVLLQMMKLVHSVHVYVCLVFL 214
FLG +K+ + N+ C NVL Q +K H VH++ L+ L
Sbjct: 685 FLGIKCANKMQQLNNMDEVCYENVLKQ-VKAGHQVHLFYLLLHL 727
>AL833964-1|CAD38812.1| 1081|Homo sapiens hypothetical protein
protein.
Length = 1081
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 68 NSKIFFLGSTSQSKLISICNLKPYCSANVLLQMMKLVHSVHVYVCLVFLLSITEASDEAK 247
NS +F L T+ + NLK +C+ N L + K++ + +C V + +K
Sbjct: 768 NSTVFKLFITTGRNGV---NLKGFCTPNQALAITKVLLPATLMLCHVQFSNTLLDIPASK 824
Query: 248 VDKVHVDCSTLRLGQFIC 301
V +VH D S + G ++C
Sbjct: 825 VFQVHSDFS-MEKGVYVC 841
>AL590431-1|CAH71259.1| 1888|Homo sapiens nuclear pore membrane
glycoprotein 210-like (LOC91181) protein.
Length = 1888
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 68 NSKIFFLGSTSQSKLISICNLKPYCSANVLLQMMKLVHSVHVYVCLVFLLSITEASDEAK 247
NS +F L T+ + NLK +C+ N L + K++ + +C V + +K
Sbjct: 1575 NSTVFKLFITTGRNGV---NLKGFCTPNQALAITKVLLPATLMLCHVQFSNTLLDIPASK 1631
Query: 248 VDKVHVDCSTLRLGQFIC 301
V +VH D S + G ++C
Sbjct: 1632 VFQVHSDFS-MEKGVYVC 1648
>AL513546-1|CAH70552.1| 1888|Homo sapiens nuclear pore membrane
glycoprotein 210-like (LOC91181) protein.
Length = 1888
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 68 NSKIFFLGSTSQSKLISICNLKPYCSANVLLQMMKLVHSVHVYVCLVFLLSITEASDEAK 247
NS +F L T+ + NLK +C+ N L + K++ + +C V + +K
Sbjct: 1575 NSTVFKLFITTGRNGV---NLKGFCTPNQALAITKVLLPATLMLCHVQFSNTLLDIPASK 1631
Query: 248 VDKVHVDCSTLRLGQFIC 301
V +VH D S + G ++C
Sbjct: 1632 VFQVHSDFS-MEKGVYVC 1648
>AL358472-1|CAI14015.1| 1888|Homo sapiens nuclear pore membrane
glycoprotein 210-like (LOC91181) protein.
Length = 1888
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 68 NSKIFFLGSTSQSKLISICNLKPYCSANVLLQMMKLVHSVHVYVCLVFLLSITEASDEAK 247
NS +F L T+ + NLK +C+ N L + K++ + +C V + +K
Sbjct: 1575 NSTVFKLFITTGRNGV---NLKGFCTPNQALAITKVLLPATLMLCHVQFSNTLLDIPASK 1631
Query: 248 VDKVHVDCSTLRLGQFIC 301
V +VH D S + G ++C
Sbjct: 1632 VFQVHSDFS-MEKGVYVC 1648
>AK128108-1|BAC87279.1| 1423|Homo sapiens protein ( Homo sapiens cDNA
FLJ46229 fis, clone TESTI4014932, weakly similar to
Integral membrane glycoprotein gp210 precursor. ).
Length = 1423
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 68 NSKIFFLGSTSQSKLISICNLKPYCSANVLLQMMKLVHSVHVYVCLVFLLSITEASDEAK 247
NS +F L T+ + NLK +C+ N L + K++ + +C V + +K
Sbjct: 1110 NSTVFKLFITTGRNGV---NLKGFCTPNQALAITKVLLPATLMLCHVQFSNTLLDIPASK 1166
Query: 248 VDKVHVDCSTLRLGQFIC 301
V +VH D S + G ++C
Sbjct: 1167 VFQVHSDFS-MEKGVYVC 1183
>AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45488 fis, clone BRTHA2003759. ).
Length = 130
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -1
Query: 494 LENIHSSIYMVVSL*MFHFLFHYILFHQLLYTPLRLHLRTEFPFLLYI-L*IVVCLDLF 321
LE ++ IYM + + +F ++F YI + +Y L ++ LYI + I +CL ++
Sbjct: 2 LEKLYVYIYMFMYIFIFIYIFIYIYIYVYVYIYLYIYFYIFTYIYLYIFIYIYICLYIY 60
>AK125924-1|BAC86345.1| 1591|Homo sapiens protein ( Homo sapiens cDNA
FLJ43936 fis, clone TESTI4013830, weakly similar to
Integral membrane glycoprotein gp210 precursor. ).
Length = 1591
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 68 NSKIFFLGSTSQSKLISICNLKPYCSANVLLQMMKLVHSVHVYVCLVFLLSITEASDEAK 247
NS +F L T+ + NLK +C+ N L + K++ + +C V + +K
Sbjct: 1299 NSTVFKLFITTGRNGV---NLKGFCTPNQALAITKVLLPATLMLCHVQFSNTLLDIPASK 1355
Query: 248 VDKVHVDCSTLRLGQFIC 301
V +VH D S + G ++C
Sbjct: 1356 VFQVHSDFS-MEKGVYVC 1372
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,654,009
Number of Sequences: 237096
Number of extensions: 1751073
Number of successful extensions: 7114
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7095
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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