Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10j04f
         (566 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g07692.1 68415.m00942 hypothetical protein                          29   1.6  
At5g60740.1 68418.m07621 ABC transporter family protein similar ...    27   8.7  
At3g12200.1 68416.m01521 protein kinase family protein contains ...    27   8.7  
At2g32295.1 68415.m03948 EXS family protein / ERD1/XPR1/SYG1 fam...    27   8.7  
At2g03480.2 68415.m00308 dehydration-responsive protein-related ...    27   8.7  
At2g03480.1 68415.m00307 dehydration-responsive protein-related ...    27   8.7  

>At2g07692.1 68415.m00942 hypothetical protein
          Length = 136

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 73  TILSRT*KVTEFMKHPRFTTDTSF 2
           ++ SRT +V EF KH RF  D SF
Sbjct: 58  SLSSRTKQVNEFSKHTRFLVDISF 81


>At5g60740.1 68418.m07621 ABC transporter family protein similar to
           ATP-binding cassette, sub-family G, member 2
           (Placenta-specific ATP- binding cassette transporter)
           (Breast cancer resistance protein) SP:Q9UNQ0 from [Homo
           sapiens]
          Length = 1061

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 413 DGIICNETKNGTFTRKLPCKWT--NGYSLEIALLLSV 517
           +GI+   T +G   ++LP +W   NGY + + +L S+
Sbjct: 754 EGILKPSTSSGVTYKQLPVRWMLHNGYPVPMDMLKSI 790


>At3g12200.1 68416.m01521 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069; contains
           serine/threonine protein kinase domain,
           INTERPRO:IPR002290
          Length = 571

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 218 SITEASDEAKVDKVHVDCSTLRLGQFICPNPSIDQIDPD 334
           S   A D+ +  ++   C TL++ +F         IDPD
Sbjct: 351 STNGAEDKLETKRIDPSCDTLKISEFTSQKSDESLIDPD 389


>At2g32295.1 68415.m03948 EXS family protein / ERD1/XPR1/SYG1 family
           protein low similarity to xenotropic and polytropic
           murine leukemia virus receptor [Mustela vison]
           GI:6093316; contains Pfam profile PF03124: EXS family
          Length = 424

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
 Frame = -2

Query: 421 YSISCYTLHFGFTFGRNFLSFYTSSELLCVWIY---LINTWVWTNKLSQS*RTAVYMHFI 251
           + +S +T  F FT    F         + VW+    L+  W WT KLS   R      FI
Sbjct: 306 WDLSVFTRIFKFTRPNLFSHLLYGRRWVYVWVIGSNLVLRWTWTYKLSAHLRNNYITVFI 365


>At2g03480.2 68415.m00308 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase;
           non-consensus GA donor site at exon 4
          Length = 595

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 378 DGISFPFIHPLNCCVSGS 325
           DG S P+ HPL  C+SG+
Sbjct: 382 DGDSVPYYHPLVPCISGT 399


>At2g03480.1 68415.m00307 dehydration-responsive protein-related
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase;
           non-consensus GA donor site at exon 4
          Length = 606

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 378 DGISFPFIHPLNCCVSGS 325
           DG S P+ HPL  C+SG+
Sbjct: 382 DGDSVPYYHPLVPCISGT 399


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,513,160
Number of Sequences: 28952
Number of extensions: 257958
Number of successful extensions: 658
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)