Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j03r
(365 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02540.1 68417.m00347 DC1 domain-containing protein contains ... 30 0.54
At3g49210.1 68416.m05378 expressed protein 30 0.54
At1g66450.1 68414.m07549 DC1 domain-containing protein contains ... 29 0.72
At1g65660.1 68414.m07450 zinc knuckle (CCHC-type) family protein... 29 0.72
At4g26380.1 68417.m03795 DC1 domain-containing protein contains ... 28 1.7
At2g07560.1 68415.m00875 ATPase, plasma membrane-type, putative ... 28 1.7
At1g15980.1 68414.m01917 expressed protein 28 1.7
At4g29140.1 68417.m04170 MATE efflux protein-related several hyp... 27 3.8
At3g49200.1 68416.m05377 hypothetical protein 27 5.0
At2g44600.1 68415.m05552 expressed protein 27 5.0
At5g66470.1 68418.m08382 expressed protein 26 6.7
At5g13250.1 68418.m01522 hypothetical protein 26 6.7
At3g23740.1 68416.m02985 expressed protein 26 6.7
At3g04900.1 68416.m00532 heavy-metal-associated domain-containin... 26 6.7
At2g07300.1 68415.m00837 hypothetical protein 26 6.7
At1g34200.1 68414.m04243 oxidoreductase family protein similar t... 26 6.7
At5g46780.2 68418.m05763 VQ motif-containing protein contains PF... 26 8.8
At5g46780.1 68418.m05762 VQ motif-containing protein contains PF... 26 8.8
At4g00230.1 68417.m00025 subtilisin-like serine endopeptidase (X... 26 8.8
At2g40230.1 68415.m04947 transferase family protein similar to t... 26 8.8
>At4g02540.1 68417.m00347 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 822
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 88 ENRTCTACSCKPPMVQGWSSCSKIHQDYAKPDAEYRTQLHHILSPHIHT 234
EN+ C AC+ P + SC + + A +R ++HH PH+ T
Sbjct: 552 ENKLCQACTT-PIYFGNFFSCMQCDFILHEKCANFRRKIHHPTHPHLLT 599
>At3g49210.1 68416.m05378 expressed protein
Length = 518
Score = 29.9 bits (64), Expect = 0.54
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 128 WFRVGLLVPRYIRITQSQTQSIEHSSTTSYPHTYI 232
W R ++V ++ ++ QTQ+IE+ + ++ TY+
Sbjct: 92 WVRTNVVVTDHVIVSDIQTQNIENGNADAFLETYV 126
>At1g66450.1 68414.m07549 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 700
Score = 29.5 bits (63), Expect = 0.72
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 ENRTCTACSCKPPMVQG-WSSCSKIHQDYAKPDAEYRTQLHHILSPHIHT 234
EN+ C AC P+ G + SC K + + A + ++HH + PH+ T
Sbjct: 422 ENKLCQACIT--PIYSGKFYSCMKCNFILHEECANFSRKIHHPIHPHMLT 469
>At1g65660.1 68414.m07450 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 535
Score = 29.5 bits (63), Expect = 0.72
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 172 RNPDVSWNKKTNPEPWEAYRNKQYKFYSPIRDY 74
R +V +N PE EAYR K+ P++D+
Sbjct: 502 RKYNVKYNNDVTPEEMEAYRMKRVHHEDPMKDF 534
>At4g26380.1 68417.m03795 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1016
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 88 ENRTCTACSCKPPMVQGWSSCSKIHQDYAKPDAEYRTQLHHILSPHIHT 234
E++ C AC P + SC++ + + A + ++HH + PH+ T
Sbjct: 762 EDKLCQAC-VMPIYFGNFYSCTQCNYILHEACANFSRKMHHPVHPHVLT 809
>At2g07560.1 68415.m00875 ATPase, plasma membrane-type, putative /
proton pump, putative similar to P-type
H(+)-transporting ATPase from [Phaseolus vulgaris]
GI:758250, [Lycopersicon esculentum] GI:1621440,
SP|Q03194 {Nicotiana plumbaginifolia}, [Solanum
tuberosum] GI:435001; contains InterPro accession
IPR001757: ATPase, E1-E2 type
Length = 949
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 71 RVVSDGRI---ELVLLVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTT--SYPHTYIQ 235
+V+ DGR E +LVP L ++G +VP R+ + I+ S+ T S P T Q
Sbjct: 136 KVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGESLPATKHQ 195
Query: 236 RDQ 244
D+
Sbjct: 196 GDE 198
>At1g15980.1 68414.m01917 expressed protein
Length = 461
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -2
Query: 193 YTLRLALRNPDVSWN--KKTNP--EPWEAYRNKQYKFYSPIRDYSKEESPAP 50
+ RL R+ DVS N KK NP +P+++ + ++ S D ++E P P
Sbjct: 32 FQTRLTSRSSDVSVNLKKKNNPWLDPFDSGEDPDNEYGSLFADGKQDEDPRP 83
>At4g29140.1 68417.m04170 MATE efflux protein-related several
hypothetical proteins - Arabidopsis thaliana; contains
Pfam profile PF01554: Uncharacterized membrane protein
family
Length = 532
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 38 SLVFGGRRFLLRVVSDGRIELVLLV---PVSLPWFRVG 142
S FG RF L ++ R + LLV P+S+ WF VG
Sbjct: 123 SQAFGAHRFKLLSLTLHRTVVFLLVCCVPISVLWFNVG 160
>At3g49200.1 68416.m05377 hypothetical protein
Length = 507
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 128 WFRVGLLVPRYIRITQSQTQSIEHSSTTSYPHTYI 232
W R ++V ++ I + QTQ IE+++ + +Y+
Sbjct: 90 WVRTNVVVEDHVIIPKIQTQHIENANADVFLESYV 124
>At2g44600.1 68415.m05552 expressed protein
Length = 313
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 115 CKPPMVQGWSSCSKIHQDYAKPDAEYRTQLHHILSPHIHTEGS 243
C P+V+ +CS + PD Y +L PH+ T S
Sbjct: 252 CLSPLVRAKPNCSSNWKAKFPPDFGYSGELKSPAKPHLSTAAS 294
>At5g66470.1 68418.m08382 expressed protein
Length = 427
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 164 RITQSQTQSIEHSSTTSYPHTYIQRDQSLMLLQ 262
R+T+S Q+ H+STTSY T + + L + Q
Sbjct: 37 RVTKSHLQA--HNSTTSYGRTELSSSKKLWIRQ 67
>At5g13250.1 68418.m01522 hypothetical protein
Length = 286
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 133 QGWSSCSKIHQDYAKPDAEYRTQ 201
QGW S H++ KPD ++R Q
Sbjct: 119 QGWLRLSLGHEEDVKPDLDHRQQ 141
>At3g23740.1 68416.m02985 expressed protein
Length = 542
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 157 IHQDYAKPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 276
++ + + PD E TQ+ H++ + GS+ SS L GS
Sbjct: 297 VNLEQSDPDKEQETQIKHVIPDTENNLGSEIPLSSPLVGS 336
>At3g04900.1 68416.m00532 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 208
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 184 RLALRNPDVSWNKKTNPEPWEAYRNKQYKFYSPIRDYSKEESPAP 50
RL P V+ K P P++ Y N + + +Y +++P P
Sbjct: 160 RLKYEEPKVTPRKPPAPYPFDYYENLGFPPSDSLFNYFSDDNPQP 204
>At2g07300.1 68415.m00837 hypothetical protein
Length = 219
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 124 PMVQGWSSCSKIHQDYAKPDAEYRTQLHHIL 216
P++ GW+ C I + Y K ++ +LH IL
Sbjct: 12 PLITGWTICVMILRIYKKMLNDHSFELHLIL 42
>At1g34200.1 68414.m04243 oxidoreductase family protein similar to
AX110P [Daucus carota] GI:285739; contains Pfam profiles
PF01408: Oxidoreductase family NAD-binding Rossmann
fold, PF02894: Oxidoreductase family C-terminal
alpha/beta domain
Length = 352
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 120 LTGTSSTSSILPSETTLRRNLLPPNTKL 37
++ ++TSSI +++ + N PPNTKL
Sbjct: 33 ISAIATTSSIEEAKSFAKSNNFPPNTKL 60
>At5g46780.2 68418.m05763 VQ motif-containing protein contains
PF05678: VQ motif
Length = 237
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 123 RLTGTSSTSSILPSETTLRRNLLPPNTKL 37
+LTG STSS+ P +T + PPN++L
Sbjct: 62 QLTGLGSTSSVNPPQTNHPK---PPNSRL 87
>At5g46780.1 68418.m05762 VQ motif-containing protein contains
PF05678: VQ motif
Length = 237
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 123 RLTGTSSTSSILPSETTLRRNLLPPNTKL 37
+LTG STSS+ P +T + PPN++L
Sbjct: 62 QLTGLGSTSSVNPPQTNHPK---PPNSRL 87
>At4g00230.1 68417.m00025 subtilisin-like serine endopeptidase
(XSP1) identical to subtilisin-type serine endopeptidase
XSP1 GI:6708179 from [Arabidopsis thaliana]
Length = 749
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 159 TSGLRKARRRV*NTAPPHPIPTHTYRGIKAL 251
TS L RRRV N PP + T T R K +
Sbjct: 659 TSTLAVFRRRVTNVGPPSSVYTATVRAPKGV 689
>At2g40230.1 68415.m04947 transferase family protein similar to
taxadienol acetyl transferase from Taxus cuspidata
[gi:6978038]; contains Pfam transferase family domain
PF002458
Length = 433
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2
Query: 226 CVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYRNKQYKFYSPIRD 77
CV G G A F TL L +S + W+ +Q SPIRD
Sbjct: 160 CVSDGIGSAEFLTLFAELSKDSLSQTELKRKHLWD----RQLLMPSPIRD 205
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,658,078
Number of Sequences: 28952
Number of extensions: 185334
Number of successful extensions: 524
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 477939072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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