Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10j02r
(749 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 31 0.050
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 28 0.35
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 25 1.9
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 25 3.3
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 24 5.8
AY645021-1|AAT92557.1| 163|Anopheles gambiae even-skipped protein. 23 7.6
AY391745-1|AAR28995.1| 460|Anopheles gambiae putative GPCR prot... 23 7.6
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 23 7.6
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 7.6
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 23 7.6
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 30.7 bits (66), Expect = 0.050
Identities = 26/113 (23%), Positives = 44/113 (38%)
Frame = -1
Query: 632 RGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAHKQKGPS 453
RG QG ++ R++Q++H + + +Q + Q +Q+
Sbjct: 212 RGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQ 271
Query: 452 RPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTVPE 294
R Q + QQN QRQ QQ+ + +QQ + V RRQ +
Sbjct: 272 REQQQQQRVQQQNQQH--QRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQ 322
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 27.9 bits (59), Expect = 0.35
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 479 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQ-QSIL 330
Q +Q+ RPQ RP + + R QR+ + L+EV P G+ +S+L
Sbjct: 463 QQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWESLL 513
Score = 25.4 bits (53), Expect = 1.9
Identities = 24/106 (22%), Positives = 41/106 (38%)
Frame = -1
Query: 623 QGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAHKQKGPSRPQ 444
QG R + RQ+ R + + +Q V L + Q Q+ + Q
Sbjct: 260 QGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQ 319
Query: 443 VDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQ 306
R + +Q + QRQ QQ+ + + +QQ Q H++Q
Sbjct: 320 QQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQ 365
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 25.4 bits (53), Expect = 1.9
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1
Query: 134 MKIWPPTKTVKPWG 93
M+++PPTK V P+G
Sbjct: 315 MRVYPPTKIVTPYG 328
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 24.6 bits (51), Expect = 3.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2
Query: 325 IMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHHWYLEPSMYESDV 182
+M+ +D +D T G SDD GD T + PS+ ES +
Sbjct: 971 VMAGDDMMMESVDLTIGGSDDGSFAGDKTHSASPNR-LESPSLNESSL 1017
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.8 bits (49), Expect = 5.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 325 IMSTEDKQYLKLDNTKGSSDDRIIYGDST 239
+M+ +D +D T G SDD GD T
Sbjct: 969 VMAGDDMMMESVDLTIGGSDDGSFAGDKT 997
>AY645021-1|AAT92557.1| 163|Anopheles gambiae even-skipped protein.
Length = 163
Score = 23.4 bits (48), Expect = 7.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 672 AVSYSPMTTLIYSCSASTSSVLGASV 749
A+S SP++ + SASTS+ ASV
Sbjct: 87 ALSLSPVSVSKFDTSASTSNSSNASV 112
>AY391745-1|AAR28995.1| 460|Anopheles gambiae putative GPCR
protein.
Length = 460
Score = 23.4 bits (48), Expect = 7.6
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +2
Query: 545 ILCP*LVGEVHGVPLAVFDQTLHGFLDNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLCQY 724
I C +VG VH VP + T + N+++ ++ + + +F DT I + +
Sbjct: 159 IACLTMVGSVHSVPYIFYAGTQYSERSNVTICDMR--KEYTSQMEIFNYIDTVIVFVVPF 216
Query: 725 VI 730
I
Sbjct: 217 TI 218
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.4 bits (48), Expect = 7.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 706 YMSVVIGEYETAIAKCSEYLKEKKGEV 626
YM +I + E +C + LKEK +V
Sbjct: 550 YMEAIIVDTEKTARRCIQILKEKMLDV 576
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.4 bits (48), Expect = 7.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 288 ITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 199
I +V+ T SS+ PLTP+ G ++PP
Sbjct: 451 IGSRVIQRTPSSS--PPLTPNTICGLIAPP 478
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 23.4 bits (48), Expect = 7.6
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 741 HQELMTYWQSSCI*VSSLVNTRPLSPN 661
HQE MT W+ + RP +P+
Sbjct: 105 HQETMTLWREVAAALDGKAKCRPRTPS 131
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,185
Number of Sequences: 2352
Number of extensions: 17463
Number of successful extensions: 66
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -