Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10j02r
         (749 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            31   5.8  
X74955-1|CAA52910.1|  622|Homo sapiens mucin protein.                  31   5.8  
BX537728-1|CAD97821.1|  609|Homo sapiens hypothetical protein pr...    31   5.8  
AF253321-1|AAF64523.1|  716|Homo sapiens cervical mucin MUC5B pr...    31   5.8  
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.     31   5.8  

>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 354  CWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 199
            C  T   +S + P  T  T   +T +    T ++T  +   PS+T GT  PP
Sbjct: 1618 CPSTPATSSTATPSSTPGTTWILTEQTTAATTTATTGSTAIPSSTPGTAPPP 1669



 Score = 30.7 bits (66), Expect = 5.8
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -3

Query: 408  SVTPKTKPARK---SPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAP 238
            S TP T P  K   SP + P    T+   + S  P+T +T   +T      T +S    P
Sbjct: 2887 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIP 2944

Query: 237  LTPSNTTGTL 208
             +   TTGTL
Sbjct: 2945 SSTLGTTGTL 2954



 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 354  CWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 199
            C  T   +S + P  T  T   +T      T +++  +  TPS+T GT  PP
Sbjct: 2845 CPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPP 2896


>X74955-1|CAA52910.1|  622|Homo sapiens mucin protein.
          Length = 622

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -3

Query: 408 SVTPKTKPARK---SPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAP 238
           S TP T P  K   SP + P    T+   + S  P+T +T   +T      T +S    P
Sbjct: 101 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTTTATKSTATSVTPIP 158

Query: 237 LTPSNTTGTL 208
            +   TTGTL
Sbjct: 159 SSTLGTTGTL 168



 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 354 CWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 199
           C  T   +S + P  T  T   +T      T +++  +  TPS+T GT  PP
Sbjct: 59  CPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPP 110


>BX537728-1|CAD97821.1|  609|Homo sapiens hypothetical protein
           protein.
          Length = 609

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 650 SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 471
           SE + G   QGSR  SD+     +  L +P        N Q  + H V SD+  +DCQ  
Sbjct: 45  SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 101

Query: 470 KQKGPS-RPQVDRPTKPQQN 414
           K  G S +PQ +   +  +N
Sbjct: 102 KPSGASQQPQSNFEVQSSRN 121


>AF253321-1|AAF64523.1|  716|Homo sapiens cervical mucin MUC5B
           protein.
          Length = 716

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -3

Query: 408 SVTPKTKPARK---SPGSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAP 238
           S TP T P  K   SP + P    T+   + S  P+T +T   +T      T +S    P
Sbjct: 361 SSTPGTAPPPKVLTSPATTPTA--TSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIP 418

Query: 237 LTPSNTTGTL 208
            +   TTGTL
Sbjct: 419 SSTLGTTGTL 428



 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 354 CWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 199
           C  T   +S + P  T  T   +T      T +++  +  TPS+T GT  PP
Sbjct: 319 CPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPP 370


>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
          Length = 1685

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -1

Query: 650  SEGKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH 471
            SE + G   QGSR  SD+     +  L +P        N Q  + H V SD+  +DCQ  
Sbjct: 1121 SEQRMGISIQGSR-VSDQLEMRSY--LDVPRNKSLAIHNMQGRVDHTVASDIRLSDCQTF 1177

Query: 470  KQKGPS-RPQVDRPTKPQQN 414
            K  G S +PQ +   +  +N
Sbjct: 1178 KPSGASQQPQSNFEVQSSRN 1197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,208,704
Number of Sequences: 237096
Number of extensions: 2482004
Number of successful extensions: 10859
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10855
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)