Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10i24r
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30317-4|CAB54306.1|  378|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z92812-6|CAB07280.1|  372|Caenorhabditis elegans Hypothetical pr...    29   4.8  

>Z30317-4|CAB54306.1|  378|Caenorhabditis elegans Hypothetical
           protein T16G12.8 protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 335 YNILMYKSAFNFNVESSECYSHIQLYVVSI 246
           YNILMY SA + NV++ EC      Y + +
Sbjct: 68  YNILMYYSASSTNVKTLECAQKCSKYGIVV 97


>Z92812-6|CAB07280.1|  372|Caenorhabditis elegans Hypothetical
           protein T03E6.6 protein.
          Length = 372

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/43 (27%), Positives = 26/43 (60%)
 Frame = +1

Query: 526 VVCINRVLLTSMVNILGVGSRHGNIFIFGIQKGLIVYEIIKSD 654
           +V  +R + TS +N+L +G    ++ I G   G+ +Y+I++ +
Sbjct: 71  LVISHRKMWTSSINVLMIGISFCDVLIIGNTFGMRIYDILQQN 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,477,446
Number of Sequences: 27780
Number of extensions: 334881
Number of successful extensions: 581
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)