Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10i24f
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 32 0.28
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 32 0.28
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 32 0.28
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 32 0.28
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 32 0.28
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 32 0.28
U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam ... 31 0.49
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 31 0.65
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 31 0.65
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 30 1.1
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 30 1.5
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 30 1.5
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 29 2.0
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41109-17|AAO12426.1| 726|Caenorhabditis elegans Hypothetical p... 28 4.6
U41109-15|AAZ91354.1| 819|Caenorhabditis elegans Hypothetical p... 28 4.6
U41109-14|AAO12423.1| 840|Caenorhabditis elegans Hypothetical p... 28 4.6
U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical pr... 28 4.6
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 28 6.0
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 28 6.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.0
AF025464-6|AAB71012.2| 376|Caenorhabditis elegans Hypothetical ... 28 6.0
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 8.0
U47144-1|AAB52616.2| 448|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 27 8.0
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 27 8.0
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 32.3 bits (70), Expect = 0.28
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 182 LTSAQNAEEIRVVVKEGSPLTVECSLRV----EHRAEWRLGGRPVPADMRVLGETASGGR 349
LT ++AE V EG PL +E + + E + W+ G+P+ A V + G
Sbjct: 2283 LTQLESAEN----VPEGVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHELGW- 2337
Query: 350 LTAKLHASSARQHHAGVYT 406
A L SSA + H GVYT
Sbjct: 2338 --ATLDISSANEDHNGVYT 2354
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 32.3 bits (70), Expect = 0.28
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 182 LTSAQNAEEIRVVVKEGSPLTVECSLRV----EHRAEWRLGGRPVPADMRVLGETASGGR 349
LT ++AE V EG PL +E + + E + W+ G+P+ A V + G
Sbjct: 2200 LTQLESAEN----VPEGVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHELGW- 2254
Query: 350 LTAKLHASSARQHHAGVYT 406
A L SSA + H GVYT
Sbjct: 2255 --ATLDISSANEDHNGVYT 2271
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 32.3 bits (70), Expect = 0.28
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 182 LTSAQNAEEIRVVVKEGSPLTVECSLRV----EHRAEWRLGGRPVPADMRVLGETASGGR 349
LT ++AE V EG PL +E + + E + W+ G+P+ A V + G
Sbjct: 2521 LTQLESAEN----VPEGVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHELGW- 2575
Query: 350 LTAKLHASSARQHHAGVYT 406
A L SSA + H GVYT
Sbjct: 2576 --ATLDISSANEDHNGVYT 2592
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 32.3 bits (70), Expect = 0.28
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 182 LTSAQNAEEIRVVVKEGSPLTVECSLRV----EHRAEWRLGGRPVPADMRVLGETASGGR 349
LT ++AE V EG PL +E + + E + W+ G+P+ A V + G
Sbjct: 2521 LTQLESAEN----VPEGVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHELGW- 2575
Query: 350 LTAKLHASSARQHHAGVYT 406
A L SSA + H GVYT
Sbjct: 2576 --ATLDISSANEDHNGVYT 2592
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 32.3 bits (70), Expect = 0.28
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 182 LTSAQNAEEIRVVVKEGSPLTVECSLRV----EHRAEWRLGGRPVPADMRVLGETASGGR 349
LT ++AE V EG PL +E + + E + W+ G+P+ A V + G
Sbjct: 2521 LTQLESAEN----VPEGVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHELGW- 2575
Query: 350 LTAKLHASSARQHHAGVYT 406
A L SSA + H GVYT
Sbjct: 2576 --ATLDISSANEDHNGVYT 2592
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 32.3 bits (70), Expect = 0.28
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 182 LTSAQNAEEIRVVVKEGSPLTVECSLRV----EHRAEWRLGGRPVPADMRVLGETASGGR 349
LT ++AE V EG PL +E + + E + W+ G+P+ A V + G
Sbjct: 2216 LTQLESAEN----VPEGVPLHLESTFQPARDPELKVVWQKNGQPLGASQLVQTKHELGW- 2270
Query: 350 LTAKLHASSARQHHAGVYT 406
A L SSA + H GVYT
Sbjct: 2271 --ATLDISSANEDHNGVYT 2287
>U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam
protein 3 protein.
Length = 487
Score = 31.5 bits (68), Expect = 0.49
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Frame = +2
Query: 179 VLTSAQNAEEIRVVVKEGSPLTVECSLRVE---HRAE--WR------LGGRPVPADMRV- 322
+ + A + + + V+EG L V C + H+++ W+ + G P+ V
Sbjct: 37 ISSEAMDYDTNTITVREGKKLMVSCVFESDEQIHKSDLLWKQANGNNIDGESNPSLFSVI 96
Query: 323 LGETASGGRLTAKLHASSARQHHAGVYTCS------EQPVQRVRVLVEPAPQTSSPDSST 484
L E S R T+ LH SS G+YTC+ E + ++++V PA + + D+
Sbjct: 97 LNEKGSKHRKTS-LHFSSVHTRDTGLYTCTGRTAGGENFEKTIKLVVLPAIEWNDKDTVK 155
Query: 485 IAPVTEP 505
A + EP
Sbjct: 156 GALLGEP 162
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 31.1 bits (67), Expect = 0.65
Identities = 28/117 (23%), Positives = 39/117 (33%)
Frame = +2
Query: 221 VKEGSPLTVECSLRVEHRAEWRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGV 400
+ EG P ++C++ A L V G + G LT S + AG
Sbjct: 1616 IPEGDPARIQCTVPGNPSAAQHLSFERVDGKGLPFGSSDDRGVLTIP----STQLQDAGE 1671
Query: 401 YTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNC 571
Y C P V P+ +P+ + PV P L G P NC
Sbjct: 1672 YVCLYSPENSPPVKTNPSTLNVTPEGTPPRPVATPP-------LLSVAPGSPARFNC 1721
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 31.1 bits (67), Expect = 0.65
Identities = 28/117 (23%), Positives = 39/117 (33%)
Frame = +2
Query: 221 VKEGSPLTVECSLRVEHRAEWRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGV 400
+ EG P ++C++ A L V G + G LT S + AG
Sbjct: 1709 IPEGDPARIQCTVPGNPSAAQHLSFERVDGKGLPFGSSDDRGVLTIP----STQLQDAGE 1764
Query: 401 YTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNC 571
Y C P V P+ +P+ + PV P L G P NC
Sbjct: 1765 YVCLYSPENSPPVKTNPSTLNVTPEGTPPRPVATPP-------LLSVAPGSPARFNC 1814
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 31.1 bits (67), Expect = 0.65
Identities = 28/117 (23%), Positives = 39/117 (33%)
Frame = +2
Query: 221 VKEGSPLTVECSLRVEHRAEWRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGV 400
+ EG P ++C++ A L V G + G LT S + AG
Sbjct: 1709 IPEGDPARIQCTVPGNPSAAQHLSFERVDGKGLPFGSSDDRGVLTIP----STQLQDAGE 1764
Query: 401 YTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNC 571
Y C P V P+ +P+ + PV P L G P NC
Sbjct: 1765 YVCLYSPENSPPVKTNPSTLNVTPEGTPPRPVATPP-------LLSVAPGSPARFNC 1814
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 31.1 bits (67), Expect = 0.65
Identities = 28/117 (23%), Positives = 39/117 (33%)
Frame = +2
Query: 221 VKEGSPLTVECSLRVEHRAEWRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGV 400
+ EG P ++C++ A L V G + G LT S + AG
Sbjct: 1616 IPEGDPARIQCTVPGNPSAAQHLSFERVDGKGLPFGSSDDRGVLTIP----STQLQDAGE 1671
Query: 401 YTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNC 571
Y C P V P+ +P+ + PV P L G P NC
Sbjct: 1672 YVCLYSPENSPPVKTNPSTLNVTPEGTPPRPVATPP-------LLSVAPGSPARFNC 1721
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 31.1 bits (67), Expect = 0.65
Identities = 28/117 (23%), Positives = 39/117 (33%)
Frame = +2
Query: 221 VKEGSPLTVECSLRVEHRAEWRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGV 400
+ EG P ++C++ A L V G + G LT S + AG
Sbjct: 1709 IPEGDPARIQCTVPGNPSAAQHLSFERVDGKGLPFGSSDDRGVLTIP----STQLQDAGE 1764
Query: 401 YTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNC 571
Y C P V P+ +P+ + PV P L G P NC
Sbjct: 1765 YVCLYSPENSPPVKTNPSTLNVTPEGTPPRPVATPP-------LLSVAPGSPARFNC 1814
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 31.1 bits (67), Expect = 0.65
Identities = 28/117 (23%), Positives = 39/117 (33%)
Frame = +2
Query: 221 VKEGSPLTVECSLRVEHRAEWRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGV 400
+ EG P ++C++ A L V G + G LT S + AG
Sbjct: 1709 IPEGDPARIQCTVPGNPSAAQHLSFERVDGKGLPFGSSDDRGVLTIP----STQLQDAGE 1764
Query: 401 YTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNC 571
Y C P V P+ +P+ + PV P L G P NC
Sbjct: 1765 YVCLYSPENSPPVKTNPSTLNVTPEGTPPRPVATPP-------LLSVAPGSPARFNC 1814
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 31.1 bits (67), Expect = 0.65
Identities = 28/117 (23%), Positives = 39/117 (33%)
Frame = +2
Query: 221 VKEGSPLTVECSLRVEHRAEWRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGV 400
+ EG P ++C++ A L V G + G LT S + AG
Sbjct: 1708 IPEGDPARIQCTVPGNPSAAQHLSFERVDGKGLPFGSSDDRGVLTIP----STQLQDAGE 1763
Query: 401 YTCSEQPVQRVRVLVEPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFNLNC 571
Y C P V P+ +P+ + PV P L G P NC
Sbjct: 1764 YVCLYSPENSPPVKTNPSTLNVTPEGTPPRPVATPP-------LLSVAPGSPARFNC 1813
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 443 VEPAPQTSSPDSSTIAPVTEPTQE 514
V PAP TS S+T AP T+P +E
Sbjct: 752 VTPAPTTSEKTSTTAAPSTKPAEE 775
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 284 RLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGVYTCSEQPVQRVRVLVEPAPQT 463
RL GRP P+D + GG LT KL + SE +R+R ++ +
Sbjct: 301 RLSGRPAPSDWQGF----VGGNLTYKLGPGFVNGEKLSINVHSELRTKRIRNVIGYIRGS 356
Query: 464 SSPDS 478
PDS
Sbjct: 357 EEPDS 361
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 284 RLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGVYTCSEQPVQRVRVLVEPAPQT 463
RL GRP P+D + GG LT KL + SE +R+R ++ +
Sbjct: 301 RLSGRPAPSDWQGF----VGGNLTYKLGPGFVNGEKLSINVHSELRTKRIRNVIGYIRGS 356
Query: 464 SSPDS 478
PDS
Sbjct: 357 EEPDS 361
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 284 RLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGVYTCSEQPVQRVRVLVEPAPQT 463
RL GRP P+D + GG LT KL + SE +R+R ++ +
Sbjct: 320 RLSGRPAPSDWQGF----VGGNLTYKLGPGFVNGEKLSINVHSELRTKRIRNVIGYIRGS 375
Query: 464 SSPDS 478
PDS
Sbjct: 376 EEPDS 380
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.5 bits (63), Expect = 2.0
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Frame = +2
Query: 218 VVKEGSPLTVECSLRV-EHRAE------WRLGGRPVPADMRVLGETASGGRLTAKLHASS 376
+ +EG +T+ C +++ E A+ W R + D+ + + GR KL S
Sbjct: 3678 IKREGDTITLTCPIKLAEDIADQVMDVSWTKDSRALDGDLTDNVDISDDGR---KLTISQ 3734
Query: 377 ARQHHAGVYTC------SEQPVQ-RVRVLVEPAPQTSSPDSSTIAPVTEPT 508
A +AG+YTC E ++ +V +L P S D V +PT
Sbjct: 3735 ASLENAGLYTCIALNRAGEASLEFKVEILSPPVIDISRNDVQPQVAVNQPT 3785
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.5 bits (63), Expect = 2.0
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Frame = +2
Query: 218 VVKEGSPLTVECSLRV-EHRAE------WRLGGRPVPADMRVLGETASGGRLTAKLHASS 376
+ +EG +T+ C +++ E A+ W R + D+ + + GR KL S
Sbjct: 3678 IKREGDTITLTCPIKLAEDIADQVMDVSWTKDSRALDGDLTDNVDISDDGR---KLTISQ 3734
Query: 377 ARQHHAGVYTC------SEQPVQ-RVRVLVEPAPQTSSPDSSTIAPVTEPT 508
A +AG+YTC E ++ +V +L P S D V +PT
Sbjct: 3735 ASLENAGLYTCIALNRAGEASLEFKVEILSPPVIDISRNDVQPQVAVNQPT 3785
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.5 bits (63), Expect = 2.0
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Frame = +2
Query: 218 VVKEGSPLTVECSLRV-EHRAE------WRLGGRPVPADMRVLGETASGGRLTAKLHASS 376
+ +EG +T+ C +++ E A+ W R + D+ + + GR KL S
Sbjct: 3678 IKREGDTITLTCPIKLAEDIADQVMDVSWTKDSRALDGDLTDNVDISDDGR---KLTISQ 3734
Query: 377 ARQHHAGVYTC------SEQPVQ-RVRVLVEPAPQTSSPDSSTIAPVTEPT 508
A +AG+YTC E ++ +V +L P S D V +PT
Sbjct: 3735 ASLENAGLYTCIALNRAGEASLEFKVEILSPPVIDISRNDVQPQVAVNQPT 3785
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.5 bits (63), Expect = 2.0
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Frame = +2
Query: 218 VVKEGSPLTVECSLRV-EHRAE------WRLGGRPVPADMRVLGETASGGRLTAKLHASS 376
+ +EG +T+ C +++ E A+ W R + D+ + + GR KL S
Sbjct: 3678 IKREGDTITLTCPIKLAEDIADQVMDVSWTKDSRALDGDLTDNVDISDDGR---KLTISQ 3734
Query: 377 ARQHHAGVYTC------SEQPVQ-RVRVLVEPAPQTSSPDSSTIAPVTEPT 508
A +AG+YTC E ++ +V +L P S D V +PT
Sbjct: 3735 ASLENAGLYTCIALNRAGEASLEFKVEILSPPVIDISRNDVQPQVAVNQPT 3785
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 29.5 bits (63), Expect = 2.0
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Frame = +2
Query: 218 VVKEGSPLTVECSLRV-EHRAE------WRLGGRPVPADMRVLGETASGGRLTAKLHASS 376
+ +EG +T+ C +++ E A+ W R + D+ + + GR KL S
Sbjct: 3678 IKREGDTITLTCPIKLAEDIADQVMDVSWTKDSRALDGDLTDNVDISDDGR---KLTISQ 3734
Query: 377 ARQHHAGVYTC------SEQPVQ-RVRVLVEPAPQTSSPDSSTIAPVTEPT 508
A +AG+YTC E ++ +V +L P S D V +PT
Sbjct: 3735 ASLENAGLYTCIALNRAGEASLEFKVEILSPPVIDISRNDVQPQVAVNQPT 3785
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical protein
D1044.2c protein.
Length = 1090
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 384 STTPESTHAASNPCSAYGSWWSLR-LRHHHPTRQRLLRSPSPP 509
S P + + S YGS+W+L L +H P R SPP
Sbjct: 1028 SGQPALSGQQAGKVSLYGSYWNLEPLSNHSPARLSTQERQSPP 1070
>U41109-17|AAO12426.1| 726|Caenorhabditis elegans Hypothetical
protein F52E1.13d protein.
Length = 726
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 347 RLTAKLHASSARQHHAGVYTCS 412
R TA+ +SA+++HAGV+ C+
Sbjct: 465 RQTAEARENSAKENHAGVFACA 486
>U41109-15|AAZ91354.1| 819|Caenorhabditis elegans Hypothetical
protein F52E1.13c protein.
Length = 819
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 347 RLTAKLHASSARQHHAGVYTCS 412
R TA+ +SA+++HAGV+ C+
Sbjct: 444 RQTAEARENSAKENHAGVFACA 465
>U41109-14|AAO12423.1| 840|Caenorhabditis elegans Hypothetical
protein F52E1.13a protein.
Length = 840
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 347 RLTAKLHASSARQHHAGVYTCS 412
R TA+ +SA+++HAGV+ C+
Sbjct: 465 RQTAEARENSAKENHAGVFACA 486
>U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical protein
F40F4.6 protein.
Length = 2214
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 452 APQTSSPDSSTIAPVTEPTQE 514
+P T+ P + TI P+T PTQ+
Sbjct: 1956 SPTTNQPATGTIGPITMPTQQ 1976
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = +2
Query: 230 GSPLTVECSLRVEHRAE--WRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGVY 403
G +T+EC + E W G + R+ G KL S A GVY
Sbjct: 1630 GHNITLECKVEGSPAPEVSWTKDGERISTTRRIRQTQDENGN--CKLSISKAESDDMGVY 1687
Query: 404 TCSEQPVQRV 433
CS V V
Sbjct: 1688 VCSATSVAGV 1697
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = +2
Query: 230 GSPLTVECSLRVEHRAE--WRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGVY 403
G +T+EC + E W G + R+ G KL S A GVY
Sbjct: 1645 GHNITLECKVEGSPAPEVSWTKDGERISTTRRIRQTQDENGN--CKLSISKAESDDMGVY 1702
Query: 404 TCSEQPVQRV 433
CS V V
Sbjct: 1703 VCSATSVAGV 1712
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = +2
Query: 230 GSPLTVECSLRVEHRAE--WRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGVY 403
G +T+EC + E W G + R+ G KL S A GVY
Sbjct: 17456 GHNITLECKVEGSPAPEVSWTKDGERISTTRRIRQTQDENGN--CKLSISKAESDDMGVY 17513
Query: 404 TCSEQPVQRV 433
CS V V
Sbjct: 17514 VCSATSVAGV 17523
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = +2
Query: 230 GSPLTVECSLRVEHRAE--WRLGGRPVPADMRVLGETASGGRLTAKLHASSARQHHAGVY 403
G +T+EC + E W G + R+ G KL S A GVY
Sbjct: 17471 GHNITLECKVEGSPAPEVSWTKDGERISTTRRIRQTQDENGN--CKLSISKAESDDMGVY 17528
Query: 404 TCSEQPVQRV 433
CS V V
Sbjct: 17529 VCSATSVAGV 17538
>AF025464-6|AAB71012.2| 376|Caenorhabditis elegans Hypothetical
protein F53G2.2 protein.
Length = 376
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +2
Query: 446 EPAPQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFN 562
EPA + ++S+++PV E+V Y ++K ++ F+
Sbjct: 114 EPAQHRTVVEASSLSPVDARETEVVGYNSIKLLIALGFS 152
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -3
Query: 397 SGVVLPS*RRVQFCCQSATGSSFPQNSHISGHRPATKSPLGTVFDTQRAFHREWRAFFHH 218
S V S R + A GS + S I G++ + + T T WRA + H
Sbjct: 1233 SAVPYDSNRVIMRLLPGADGSDYINASWIDGYKERG-AYIATQAPTNETAADFWRAIWEH 1291
Query: 217 HSDLLSVLGTRKNSAG 170
+S ++++L R N G
Sbjct: 1292 NSPIIAML-VRTNERG 1306
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -3
Query: 397 SGVVLPS*RRVQFCCQSATGSSFPQNSHISGHRPATKSPLGTVFDTQRAFHREWRAFFHH 218
S V S R + A GS + S I G++ + + T T WRA + H
Sbjct: 1946 SAVPYDSNRVIMRLLPGADGSDYINASWIDGYKERG-AYIATQAPTNETAADFWRAIWEH 2004
Query: 217 HSDLLSVLGTRKNSAG 170
+S ++++L R N G
Sbjct: 2005 NSPIIAML-VRTNERG 2019
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical protein
C09D8.1c protein.
Length = 1216
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -3
Query: 397 SGVVLPS*RRVQFCCQSATGSSFPQNSHISGHRPATKSPLGTVFDTQRAFHREWRAFFHH 218
S V S R + A GS + S I G++ + + T T WRA + H
Sbjct: 982 SAVPYDSNRVIMRLLPGADGSDYINASWIDGYKERG-AYIATQAPTNETAADFWRAIWEH 1040
Query: 217 HSDLLSVLGTRKNSAG 170
+S ++++L R N G
Sbjct: 1041 NSPIIAML-VRTNERG 1055
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -3
Query: 397 SGVVLPS*RRVQFCCQSATGSSFPQNSHISGHRPATKSPLGTVFDTQRAFHREWRAFFHH 218
S V S R + A GS + S I G++ + + T T WRA + H
Sbjct: 1233 SAVPYDSNRVIMRLLPGADGSDYINASWIDGYKERG-AYIATQAPTNETAADFWRAIWEH 1291
Query: 217 HSDLLSVLGTRKNSAG 170
+S ++++L R N G
Sbjct: 1292 NSPIIAML-VRTNERG 1306
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -3
Query: 397 SGVVLPS*RRVQFCCQSATGSSFPQNSHISGHRPATKSPLGTVFDTQRAFHREWRAFFHH 218
S V S R + A GS + S I G++ + + T T WRA + H
Sbjct: 1946 SAVPYDSNRVIMRLLPGADGSDYINASWIDGYKERG-AYIATQAPTNETAADFWRAIWEH 2004
Query: 217 HSDLLSVLGTRKNSAG 170
+S ++++L R N G
Sbjct: 2005 NSPIIAML-VRTNERG 2019
>U47144-1|AAB52616.2| 448|Caenorhabditis elegans Hypothetical
protein ZC53.1 protein.
Length = 448
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 455 PQTSSPDSSTIAPVTEPTQELVNYEALKYIVGRPFN-LNCTLAVPLDSFEIV 607
P TSS + S AP+ EP+ E + R +N L V LD F +V
Sbjct: 312 PPTSSGNQSIRAPMNEPSYERIQALVRDVYARRKSGAVNDDLTVSLDGFRMV 363
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -3
Query: 397 SGVVLPS*RRVQFCCQSATGSSFPQNSHISGHRPATKSPLGTVFDTQRAFHREWRAFFHH 218
S V S R + A GS + S I G++ + + T T WRA + H
Sbjct: 1253 SAVPYDSNRVIMRLLPGADGSDYINASWIDGYKERG-AYIATQAPTNETAADFWRAIWEH 1311
Query: 217 HSDLLSVLGTRKNSAG 170
+S ++++L R N G
Sbjct: 1312 NSPIIAML-VRTNERG 1326
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -3
Query: 397 SGVVLPS*RRVQFCCQSATGSSFPQNSHISGHRPATKSPLGTVFDTQRAFHREWRAFFHH 218
S V S R + A GS + S I G++ + + T T WRA + H
Sbjct: 1966 SAVPYDSNRVIMRLLPGADGSDYINASWIDGYKERG-AYIATQAPTNETAADFWRAIWEH 2024
Query: 217 HSDLLSVLGTRKNSAG 170
+S ++++L R N G
Sbjct: 2025 NSPIIAML-VRTNERG 2039
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,216,677
Number of Sequences: 27780
Number of extensions: 303369
Number of successful extensions: 1260
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -