Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10i23f
(577 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 23 1.4
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 23 1.9
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 2.5
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 22 4.3
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 22 4.3
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 5.7
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 21 5.7
EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine vasopre... 21 7.5
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 7.5
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 21 7.5
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 21 9.9
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 21 9.9
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 21 9.9
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 23.4 bits (48), Expect = 1.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 184 RSHR*GCCCTVCPR 143
R+H C CT+CP+
Sbjct: 2 RTHTLPCKCTICPK 15
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 23.0 bits (47), Expect = 1.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 266 LTRDGTPWSTATSCGSATDRILSKSTS 346
+TR T ST TS +D LSK S
Sbjct: 383 ITRKSTSSSTHTSSQQTSDSFLSKRNS 409
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 178 HR*GCCCTVCPRGL 137
HR G CC CP L
Sbjct: 99 HRPGRCCKTCPGDL 112
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 21.8 bits (44), Expect = 4.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 347 GKYFLTISCPLPTHSL*QYSMVFRLL 270
G F T+ +P H+ +Y VF++L
Sbjct: 263 GSVFNTVLELMPKHACSEYCRVFKML 288
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 34 APNKMKLLVVFAMCVLAASA 93
APN + VV+A C L A+A
Sbjct: 123 APNGHQTQVVYASCKLQAAA 142
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.4 bits (43), Expect = 5.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 341 YFLTISCPLPTHSL*QYSMVFRL 273
Y TI+ PL L Y+M FR+
Sbjct: 323 YDSTITAPLSNPPLWPYTMYFRM 345
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 21.4 bits (43), Expect = 5.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 272 RDGTPWSTATSCGSATDR 325
R+GT +TA SC S+T R
Sbjct: 378 RNGTFSTTANSCRSSTFR 395
>EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine
vasopressin-like peptide protein.
Length = 146
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 169 GCCCTVCPRG 140
GC T CPRG
Sbjct: 20 GCLITNCPRG 29
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 569 YWLYLVLWA 543
YWLYLVL A
Sbjct: 59 YWLYLVLEA 67
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 569 YWLYLVLWA 543
YWLYLVL A
Sbjct: 77 YWLYLVLEA 85
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 192 CT*ELGIREPRPGQH 236
CT ++EP+P QH
Sbjct: 92 CTSRPKLQEPQPSQH 106
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 127 PSNQDLEDKLYNSILTGDY 183
P N DL++ L N LT +Y
Sbjct: 25 PQNIDLDEILKNDRLTRNY 43
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 256 NLIIDKRRNTMEYCYKL 306
+++ R T E CYKL
Sbjct: 233 DVVASNSRKTAEMCYKL 249
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,610
Number of Sequences: 336
Number of extensions: 2586
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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