BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10i20f (642 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g27410.1 68418.m03272 aminotransferase class IV family protei... 31 0.49 At1g63600.1 68414.m07189 protein kinase-related low similarity t... 28 6.1 >At5g27410.1 68418.m03272 aminotransferase class IV family protein contains Pfam profile: PF01063 aminotransferase class IV Length = 559 Score = 31.5 bits (68), Expect = 0.49 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -3 Query: 610 TFPGMYGPLLSTVTVFFNLAPCLIELRSAFLSSA-PPPFLDPP 485 TFP M+ LL +N+ C ++ +S+ LSS PPP L P Sbjct: 212 TFPLMHYDLLEQCLPLYNILRCHMKHKSSLLSSTLPPPSLPVP 254 >At1g63600.1 68414.m07189 protein kinase-related low similarity to receptor-like protein kinase 5 [Arabidopsis thaliana] GI:13506747; contains Pfam profile: PF01657 Domain of unknown function DUF26 Length = 302 Score = 27.9 bits (59), Expect = 6.1 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -3 Query: 547 CLIELRSAFLSSAPPPFLDPP 485 CL+ + LSS PPP+ PP Sbjct: 244 CLLRYEATALSSPPPPYPSPP 264 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,162,854 Number of Sequences: 28952 Number of extensions: 212180 Number of successful extensions: 450 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 446 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 449 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1324661040 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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