Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10i17f
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 84 9e-17
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 58 7e-09
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 58 7e-09
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ... 54 9e-08
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport... 54 9e-08
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 54 1e-07
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 54 1e-07
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein ... 48 4e-06
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 48 4e-06
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 30 1.6
U53150-1|AAA96123.2| 302|Caenorhabditis elegans Serpentine rece... 30 1.6
AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical ... 29 2.8
Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81132-10|CAB03433.1| 320|Caenorhabditis elegans Hypothetical p... 28 4.9
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 28 4.9
AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transpor... 28 4.9
U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 27 8.6
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 27 8.6
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 83.8 bits (198), Expect = 9e-17
Identities = 53/174 (30%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Frame = +1
Query: 106 ITTLVSFFQIFRYGNCLELLATALGVVFGMISGAGVCCNLLQIGELSTAFV-ERTKYHDR 282
+ VS Q++RY LE L +G + +I+GAG+ + G++S AF+ E+ ++
Sbjct: 56 VVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNN 115
Query: 283 LSSYLPLTATFGGGKRLVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFCVLSFSLISW 462
S++LP G+ E ++ ++ AM +GM+ + G +V C L +
Sbjct: 116 GSTFLPT------GQNYTKTDFEHDVMNVVWSYAAMTVGMWAA-GQIIVTCYL------Y 162
Query: 463 SALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAV 624
A + R+R F++S+LRQ++SW+DT+ LA+K+ +NL +KEG G+K+ +
Sbjct: 163 VAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 82.6 bits (195), Expect = 2e-16
Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Frame = +1
Query: 106 ITTLVSFFQIFRYGNCLELLATALGVVFGMISGAGVCCNLLQIGELSTAFV-ERTKYHDR 282
+ VS Q++RY LE L +G + +I+GAG+ + G++S AF+ E+ ++
Sbjct: 56 VVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNN 115
Query: 283 LSSYLPLTATFGGGKRLVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFCVLSFSLISW 462
S++LP G+ E ++ ++ AM +GM+ + G V C L +
Sbjct: 116 GSTFLPT------GQNYTKTDFEHDVMNVVWSYAAMTVGMWAA-GQITVTCYL------Y 162
Query: 463 SALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAV 624
A + R+R F++S+LRQ++SW+DT+ LA+K+ +NL +KEG G+K+ +
Sbjct: 163 VAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 57.6 bits (133), Expect = 7e-09
Identities = 43/174 (24%), Positives = 85/174 (48%)
Frame = +1
Query: 118 VSFFQIFRYGNCLELLATALGVVFGMISGAGVCCNLLQIGELSTAFVERTKYHDRLSSYL 297
+S FQ++RY + ++ L A+G++ +G G+ + +G +S FV + +L
Sbjct: 29 ISIFQLYRYTSTVDRLMLAVGIIVSCATGVGLPLMSIIMGNVSQNFVTLG------TIFL 82
Query: 298 PLTATFGGGKRLVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFCVLSFSLISWSALRQ 477
+T A E + E + + K + +G I + F S ++ L
Sbjct: 83 DPNST---ASEKAAARAEFSHEVIQNCLKYVYLGCGI---FAAGFLQASCFMVICEKLSN 136
Query: 478 ITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAVVSNLV 639
R R F SV+RQ+++WYD ++ L++K+ +NL ++EG G+K+ + ++
Sbjct: 137 --RFRRQFFHSVMRQEIAWYDKNTSGTLSNKLFDNLERVREGTGDKVGLAFQMM 188
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 328 RLVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFCVLSFSLISWSALRQITRIRTLFLR 507
+++N + + + D A+ + V + SL +A R RIR+ R
Sbjct: 729 QIINVFSNPDRDQMKKDGHFWALMFLVLAAVQGTSMLFQCSLFGVAAERLTMRIRSKVYR 788
Query: 508 SVLRQDMSWYD--TDSEFNLASKMSENLMSIKEGMGEKLAVVSNLV 639
+VLRQD +++D S + ++++ + +IK + +L + N +
Sbjct: 789 NVLRQDATYFDMPKHSPGRITTRLATDAPNIKSAIDYRLGSIFNAI 834
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 57.6 bits (133), Expect = 7e-09
Identities = 43/174 (24%), Positives = 85/174 (48%)
Frame = +1
Query: 118 VSFFQIFRYGNCLELLATALGVVFGMISGAGVCCNLLQIGELSTAFVERTKYHDRLSSYL 297
+S FQ++RY + ++ L A+G++ +G G+ + +G +S FV + +L
Sbjct: 29 ISIFQLYRYTSTVDRLMLAVGIIVSCATGVGLPLMSIIMGNVSQNFVTLG------TIFL 82
Query: 298 PLTATFGGGKRLVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFCVLSFSLISWSALRQ 477
+T A E + E + + K + +G I + F S ++ L
Sbjct: 83 DPNST---ASEKAAARAEFSHEVIQNCLKYVYLGCGI---FAAGFLQASCFMVICEKLSN 136
Query: 478 ITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAVVSNLV 639
R R F SV+RQ+++WYD ++ L++K+ +NL ++EG G+K+ + ++
Sbjct: 137 --RFRRQFFHSVMRQEIAWYDKNTSGTLSNKLFDNLERVREGTGDKVGLAFQMM 188
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 328 RLVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFCVLSFSLISWSALRQITRIRTLFLR 507
+++N + + + D A+ + V + SL +A R RIR+ R
Sbjct: 729 QIINVFSNPDRDQMKKDGHFWALMFLVLAAVQGTSMLFQCSLFGVAAERLTMRIRSKVYR 788
Query: 508 SVLRQDMSWYD--TDSEFNLASKMSENLMSIKEGMGEKLAVVSNLV 639
+VLRQD +++D S + ++++ + +IK + +L + N +
Sbjct: 789 NVLRQDATYFDMPKHSPGRITTRLATDAPNIKSAIDYRLGSIFNAI 834
>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
related protein 2 protein.
Length = 1272
Score = 54.0 bits (124), Expect = 9e-08
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Frame = +1
Query: 109 TTLVSFFQIFRYGNCLELLATALGVVFGMISGAGVCCNLLQIGELSTAFVERTKYHDRLS 288
T ++ + IF Y ++LL G V +I GAG + +G ++T F+ S
Sbjct: 37 TVKLTNYGIFYYTQGVDLLLLITGTVAAVIHGAGFPLLAIVLGGMTTVFLRAQN-----S 91
Query: 289 SYLPLTATFGGGKRLVNATHEQNMEALIDDAKAMAIG--MFISIGVSLVFCVLSFSLISW 462
++ + + E N E + + +G MF + V + C S+
Sbjct: 92 DFVVGVDNVNPEGLVPISLDEFNSEVVKYCIYYLVLGVLMFFTSYVQIA-CFESY----- 145
Query: 463 SALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAVV 627
A R + ++R +L+++LRQ + W+D NL ++++++L ++EG+G+K A++
Sbjct: 146 -AERLVHKLRQNYLKAILRQQIQWFDKQQTGNLTARLTDDLERVREGLGDKFALL 199
>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
PGP-2 protein.
Length = 1272
Score = 54.0 bits (124), Expect = 9e-08
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Frame = +1
Query: 109 TTLVSFFQIFRYGNCLELLATALGVVFGMISGAGVCCNLLQIGELSTAFVERTKYHDRLS 288
T ++ + IF Y ++LL G V +I GAG + +G ++T F+ S
Sbjct: 37 TVKLTNYGIFYYTQGVDLLLLITGTVAAVIHGAGFPLLAIVLGGMTTVFLRAQN-----S 91
Query: 289 SYLPLTATFGGGKRLVNATHEQNMEALIDDAKAMAIG--MFISIGVSLVFCVLSFSLISW 462
++ + + E N E + + +G MF + V + C S+
Sbjct: 92 DFVVGVDNVNPEGLVPISLDEFNSEVVKYCIYYLVLGVLMFFTSYVQIA-CFESY----- 145
Query: 463 SALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAVV 627
A R + ++R +L+++LRQ + W+D NL ++++++L ++EG+G+K A++
Sbjct: 146 -AERLVHKLRQNYLKAILRQQIQWFDKQQTGNLTARLTDDLERVREGLGDKFALL 199
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 53.6 bits (123), Expect = 1e-07
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Frame = +1
Query: 121 SFFQIFRYGNCLELLATALGVVFGMISGAGVCCNLLQIGELSTAFVERTKYHDRLSSYLP 300
+FF +FR + + + + G++ ++GA V N L ++ A +E
Sbjct: 30 NFFDVFRDADYKDYILFSGGLILSAVNGALVPFNSLIFEGIANALME------------- 76
Query: 301 LTATFGGGKRLVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFC-VLSFSLISWSALRQ 477
G + N T NM + K + F +GV+L C + S + R+
Sbjct: 77 ------GESQYQNGT--INMPWFSSEIKMFCLRYFY-LGVALFLCSYFANSCLYTLCERR 127
Query: 478 ITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAVV 627
+ IR +L+SVLRQD W+D + L KMS + IK+G+G+K+ V+
Sbjct: 128 LHCIRKKYLKSVLRQDAKWFDETTIGGLTQKMSSGIEKIKDGIGDKVGVL 177
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +1
Query: 436 VLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFN---LASKMSENLMSIKEGM 606
++S SL+ + R+R R++++QD S++D DS N L S+++ + +++ +
Sbjct: 766 LISGSLLGKAGETMSGRLRMDVFRNIMQQDASYFD-DSRHNVGSLTSRLATDAPNVQAAI 824
Query: 607 GEKLAVV 627
++LA V
Sbjct: 825 DQRLAEV 831
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 53.6 bits (123), Expect = 1e-07
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Frame = +1
Query: 121 SFFQIFRYGNCLELLATALGVVFGMISGAGVCCNLLQIGELSTAFVERTKYHDRLSSYLP 300
+FF +FR + + + + G++ ++GA V N L ++ A +E
Sbjct: 30 NFFDVFRDADYKDYILFSGGLILSAVNGALVPFNSLIFEGIANALME------------- 76
Query: 301 LTATFGGGKRLVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFC-VLSFSLISWSALRQ 477
G + N T NM + K + F +GV+L C + S + R+
Sbjct: 77 ------GESQYQNGT--INMPWFSSEIKMFCLRYFY-LGVALFLCSYFANSCLYTLCERR 127
Query: 478 ITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAVV 627
+ IR +L+SVLRQD W+D + L KMS + IK+G+G+K+ V+
Sbjct: 128 LHCIRKKYLKSVLRQDAKWFDETTIGGLTQKMSSGIEKIKDGIGDKVGVL 177
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +1
Query: 436 VLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFN---LASKMSENLMSIKEGM 606
++S SL+ + R+R R++++QD S++D DS N L S+++ + +++ +
Sbjct: 766 LISGSLLGKAGETMSGRLRMDVFRNIMQQDASYFD-DSRHNVGSLTSRLATDAPNVQAAI 824
Query: 607 GEKLAVV 627
++LA V
Sbjct: 825 DQRLAEV 831
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 53.6 bits (123), Expect = 1e-07
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Frame = +1
Query: 121 SFFQIFRYGNCLELLATALGVVFGMISGAGVCCNLLQIGELSTAFVERTKYHDRLSSYLP 300
+FF +FR + + + + G++ ++GA V N L ++ A +E
Sbjct: 30 NFFDVFRDADYKDYILFSGGLILSAVNGALVPFNSLIFEGIANALME------------- 76
Query: 301 LTATFGGGKRLVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFC-VLSFSLISWSALRQ 477
G + N T NM + K + F +GV+L C + S + R+
Sbjct: 77 ------GESQYQNGT--INMPWFSSEIKMFCLRYFY-LGVALFLCSYFANSCLYTLCERR 127
Query: 478 ITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAVV 627
+ IR +L+SVLRQD W+D + L KMS + IK+G+G+K+ V+
Sbjct: 128 LHCIRKKYLKSVLRQDAKWFDETTIGGLTQKMSSGIEKIKDGIGDKVGVL 177
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +1
Query: 436 VLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFN---LASKMSENLMSIKEGM 606
++S SL+ + R+R R++++QD S++D DS N L S+++ + +++ +
Sbjct: 752 LISGSLLGKAGETMSGRLRMDVFRNIMQQDASYFD-DSRHNVGSLTSRLATDAPNVQAAI 810
Query: 607 GEKLAVV 627
++LA V
Sbjct: 811 DQRLAEV 817
>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical
protein F42E11.1 protein.
Length = 1266
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 400 MFISIGVSLVFCV-LSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMS 576
++ +GV + C S + + A R++ IR L+SVLRQD W+D ++ L KMS
Sbjct: 99 LYFLLGVLMFTCTYFSNACLFTMAERRLYCIRKHLLQSVLRQDAKWFDENTVGGLTQKMS 158
Query: 577 ENLMSIKEGMGEKLAVV 627
+ IK+G+G+K+ V+
Sbjct: 159 SGIEKIKDGIGDKIGVL 175
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/80 (23%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +1
Query: 403 FISIGV-SLVFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSE--FNLASKM 573
F+ + V S V +S SL+ + +R+R +++++QD +++D NL S++
Sbjct: 752 FVLLAVTSAVTTFISGSLLGKTGETMSSRLRMDVFKNIMQQDATYFDDPKHNVGNLTSRL 811
Query: 574 SENLMSIKEGMGEKLAVVSN 633
+ + +++ + +LA V N
Sbjct: 812 ATDSQNVQAAIDHRLAEVLN 831
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical
protein F22E10.1 protein.
Length = 1318
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/85 (25%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 376 DAKAMAIGMFISIGVS-LVFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSE 552
D+ + +F IG+ L+ + + + +R ++++ +++S+LRQ+ W+D +
Sbjct: 133 DSAMTNVWLFGGIGIIVLIVNFVQYMCFQYCCIRITSKMKQHYIQSILRQNAGWFDKNHS 192
Query: 553 FNLASKMSENLMSIKEGMGEKLAVV 627
L +K+ +N+ I EG+G+KL V+
Sbjct: 193 GTLTTKLHDNMERINEGIGDKLGVL 217
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
protein F22E10.3 protein.
Length = 1327
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/77 (27%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 400 MFISIGVSL-VFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMS 576
+F+ IG+ + + + + R + ++R F+ SVLRQ+ W+D + + +K++
Sbjct: 153 IFLGIGIFISITNFIQYMCFQHCCTRVMAQMRHRFVYSVLRQNAGWFDKNHSGTITTKLN 212
Query: 577 ENLMSIKEGMGEKLAVV 627
+++ I+EG+G+KL V+
Sbjct: 213 DSMERIREGIGDKLGVL 229
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +1
Query: 385 AMAIGMFISIGVSLVFCVLSFSLISWSALRQIT-RIRTLFLRSVLRQDMSWYDTDSEF-- 555
AMA+ F S+GV + F L+ S++ ++ R R R++L QD S++D +
Sbjct: 807 AMAVIAFASVGVGVWFSQLASSVLFAVVSENLSMRFRVQSFRNLLYQDASYFDNPAHAPG 866
Query: 556 NLASKMSENLMSIK 597
L ++++ + +IK
Sbjct: 867 KLITRLASDAPNIK 880
>U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein
related protein 10 protein.
Length = 1382
Score = 48.4 bits (110), Expect = 4e-06
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Frame = +1
Query: 370 IDDAKA-MAIGMFIS-IGVSLVFCVLSF-SLISW--SALRQITRIRTLFLRSVLRQDMSW 534
IDD A A FIS +G+S+ + +F I+W S++RQ+ RI+ ++R +L D+SW
Sbjct: 144 IDDQFAHSATPAFISMLGLSIAMFIAAFCQRIAWEISSIRQVFRIKKAYIRKLLLMDISW 203
Query: 535 YDTDSEFNLASKMSENLMSIKEGMGEKLAVV 627
++ ++A+ + E+ SI G+ + L +V
Sbjct: 204 LESRQSGHVAAMLQESADSIYNGISDHLPMV 234
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/77 (27%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 400 MFISIGVSL-VFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMS 576
+F+ IG+ + + + + R + ++R F+ SVLRQ+ W+D + + +K++
Sbjct: 153 IFLGIGIFISITNFIQYMCFQHCCTRVMAQMRHRFVYSVLRQNAGWFDKNHSGTITTKLN 212
Query: 577 ENLMSIKEGMGEKLAVV 627
+++ I+EG+G+KL V+
Sbjct: 213 DSMERIREGIGDKLGVL 229
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +1
Query: 385 AMAIGMFISIGVSLVFCVLSFSLISWSALRQIT-RIRTLFLRSVLRQDMSWYDTDSEF-- 555
AMA+ F S+GV + F L+ S++ ++ R R R++L QD S++D +
Sbjct: 807 AMAVIAFASVGVGVWFSQLASSVLFAVVSENLSMRFRVQSFRNLLYQDASYFDNPAHAPG 866
Query: 556 NLASKMSENLMSIK 597
L ++++ + +IK
Sbjct: 867 KLITRLASDAPNIK 880
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical
protein F22E10.2 protein.
Length = 1324
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/80 (27%), Positives = 47/80 (58%)
Frame = +1
Query: 388 MAIGMFISIGVSLVFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLAS 567
+ +G+F+SI FC + R +T +R ++ S+LRQ+ W+D + + +
Sbjct: 143 LGLGIFVSIND---FC--QYMCFQRVCSRMMTVMRNRYISSILRQNAGWFDKNLSGTITT 197
Query: 568 KMSENLMSIKEGMGEKLAVV 627
++++N+ I++G+G+KL V+
Sbjct: 198 RLNDNMERIQDGVGDKLGVL 217
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = +1
Query: 331 LVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFCVLSFSLISWSALRQITRIRTLFLRS 510
L N N E L + G+ + + LV ++ I R + IR FL +
Sbjct: 104 LTNGNTAGNDEFLYSVLTLIYAGLGFGV-IILVLALIQGVCIQRGTSRILDSIRKEFLGA 162
Query: 511 VLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAVV 627
VLRQD +W D S ++ +++EN+ I +G+G K ++
Sbjct: 163 VLRQDANWLDKHSSGSITCQLNENIEVISDGLGNKCCML 201
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +1
Query: 424 LVFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEG 603
+ F + FSL + R+R F+ +L++D ++DT S L++ +++NL +E
Sbjct: 111 MFFGFIQFSLFKYIGDNTTYRLRHKFILRLLKKDAKYFDTISTGYLSTVLNDNLERFREA 170
Query: 604 MGEKLAVV 627
EK+A +
Sbjct: 171 FNEKIAFI 178
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/172 (20%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Frame = +1
Query: 115 LVSFFQI-FRYGNCLELLATALGVVFGMISGAGVCCNLLQIGELSTAFVERTKYHDRLSS 291
+ SF ++ F+ +C E LGV+F +++G GE+S V T +
Sbjct: 24 ICSFIRVVFKCSSCFEKFLFLLGVLFSLMTGFCQPFMSYTFGEVSQVLVTITNAINN--- 80
Query: 292 YLPLTATFGGGKRLVNATHEQNMEALIDDAKAMAIGMFISIGVSLVFCVLSFSLISWSAL 471
K + A E+ E + F+ +F L +++ +
Sbjct: 81 -----------KTIDPADLEKAYEEYERGMNQVVFHFFLCGCAYFIFASLQHAIMKYVGD 129
Query: 472 RQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAVV 627
R+R ++ +L++D ++D+ S +L++ +++NL +E EK+A++
Sbjct: 130 NTTYRVRKQYISRLLKKDAQYFDSVSTGHLSTVLNDNLERFREVFNEKIALI 181
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical
protein T21E8.3 protein.
Length = 1243
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +1
Query: 424 LVFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEG 603
+ F + FSL + R+R F+ +L++D ++DT S L++ +++NL +E
Sbjct: 111 MFFGFIQFSLFKYIGDNTTYRLRHKFILRLLKKDAKYFDTISTGYLSTVLNDNLERFREA 170
Query: 604 MGEKLAVV 627
EK+A +
Sbjct: 171 FNEKIAFI 178
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 400 MFISIGVS-LVFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMS 576
+F +G + F L FS++ + +R ++ +LR+D+S++D S +L+ ++
Sbjct: 130 LFFLVGFAYFTFGFLQFSIMKFVGDNTAYNVRRQYISRLLRKDISYFDGMSTGHLSIVLN 189
Query: 577 ENLMSIKEGMGEKLAVVSNLV 639
+N+ +E EK+A++ L+
Sbjct: 190 DNMERFREVFNEKIALIIALL 210
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/67 (22%), Positives = 39/67 (58%)
Frame = +1
Query: 427 VFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGM 606
+F L +++ + R+R ++ +L++D ++D+ S +L++ +++NL +E
Sbjct: 56 IFASLQHAIMKYVGDNTTYRVRKQYISRLLKKDAQYFDSVSTGHLSTVLNDNLERFREVF 115
Query: 607 GEKLAVV 627
EK+A++
Sbjct: 116 NEKIALI 122
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/70 (22%), Positives = 39/70 (55%)
Frame = +1
Query: 430 FCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMG 609
F + +++ + R+R ++ +LR+D ++D S +L++ +++NL +E
Sbjct: 116 FASIQHAIMKYVGDNTTYRVRKQYISRLLRKDAEYFDNVSTGHLSTVLNDNLERFREVFN 175
Query: 610 EKLAVVSNLV 639
EK+A++ L+
Sbjct: 176 EKIALIFALL 185
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 181 VVFGMISGAG-VCCNLLQIGELSTAFVERTKYHDRLS 288
++ G GAG V C++ T FV R K+H RLS
Sbjct: 877 LILGTALGAGSVMCDVASAMSFPTPFVPREKHHSRLS 913
>U53150-1|AAA96123.2| 302|Caenorhabditis elegans Serpentine
receptor, class sx protein32 protein.
Length = 302
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 397 GMFISIGVSLVFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTD--SEFNLASK 570
G+FI+I + +V+ L +++ Q+ + L +V+ + W ++F + +K
Sbjct: 174 GIFINIAIVIVYFFTFLQLRTYAGATQMKVVFRSILWTVIFVIIGWSSVTIANQFAIFAK 233
Query: 571 --MSENLMSIKEGMGEKLAVVSNL 636
+ L+SI G+G LA SN+
Sbjct: 234 DAATRKLISIYAGIGVNLACASNI 257
>AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical
protein B0238.7 protein.
Length = 578
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 411 YWSISCVLRAVLQPNQLERFTPDNENKDVVPEVCTSSRHVLVRH 542
YW I C+L ++++ L TP+ +N ++ C R + +H
Sbjct: 6 YWGIGCLLLSIVEGGFLVNLTPE-KNSQILNAPCGPIRGNIYKH 48
>Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical
protein F57A10.3 protein.
Length = 733
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 478 ITRIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSI 594
I +R SVLRQDM+++D + + S++S + + +
Sbjct: 236 INDLRKSVFNSVLRQDMAFFDKNKVGEIVSRLSTDALIV 274
>Z81132-10|CAB03433.1| 320|Caenorhabditis elegans Hypothetical
protein T26E4.12 protein.
Length = 320
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +1
Query: 385 AMAIGMFISIGVSLVFCVLSFSLISWSALRQITRIRTLFLRSVLRQDMSWYDTDSEFNLA 564
A+AI + ++G+ VL +++WSAL T I LF+ S+L + ++ + A
Sbjct: 148 AVAIAIPENVGIEARDMVLGGKIVTWSAL---TLIIQLFITSILVLIAYAWIRNTLLSFA 204
Query: 565 SKMSENLMSIKEGMGEKLAVVSN 633
KM + +K+ + +L V N
Sbjct: 205 VKMGSDKNDVKK-LNTRLVKVIN 226
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical
protein C48B4.4c protein.
Length = 1704
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 326 KDWLTLRTNKIWRLLSM 376
KDW+ LR NK+W L +
Sbjct: 13 KDWVLLRRNKVWTLFEL 29
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical
protein C48B4.4b protein.
Length = 1691
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 326 KDWLTLRTNKIWRLLSM 376
KDW+ LR NK+W L +
Sbjct: 13 KDWVLLRRNKVWTLFEL 29
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical
protein C48B4.4a protein.
Length = 1689
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 326 KDWLTLRTNKIWRLLSM 376
KDW+ LR NK+W L +
Sbjct: 13 KDWVLLRRNKVWTLFEL 29
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 326 KDWLTLRTNKIWRLLSM 376
KDW+ LR NK+W L +
Sbjct: 13 KDWVLLRRNKVWTLFEL 29
>AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transporter
(pgp related)protein 2 protein.
Length = 761
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 484 RIRTLFLRSVLRQDMSWYDTDSEFNLASKMSENLMSIKEGMGEKLAV 624
RIR S++RQD+++YDT + S+++ + +I + + V
Sbjct: 271 RIRLDLFTSLIRQDIAFYDTAKTGDTMSRLTSDCQTISSTVSTNVNV 317
>U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical
protein R02F2.5 protein.
Length = 223
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 168 NRSRGSLRNDKWSRRVLQPAPNRRTE 245
N R + R+D+ +R+ QP+PN TE
Sbjct: 11 NNQRNNQRSDQMNRQHTQPSPNASTE 36
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 432 EHKRYSNTDEHSDGHCFRV 376
EH R++++ E SDGH RV
Sbjct: 253 EHNRFTSSSEKSDGHRIRV 271
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 432 EHKRYSNTDEHSDGHCFRV 376
EH R++++ E SDGH RV
Sbjct: 251 EHNRFTSSSEKSDGHRIRV 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,561,894
Number of Sequences: 27780
Number of extensions: 301081
Number of successful extensions: 942
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -