Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10i16r
(757 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 217 5e-56
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 217 5e-56
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 217 5e-56
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 217 5e-56
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 217 5e-56
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 217 5e-56
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 217 5e-56
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 215 2e-55
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 48 5e-05
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 48 5e-05
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 48 5e-05
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 48 5e-05
X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric ca... 46 1e-04
BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding pro... 46 1e-04
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 46 1e-04
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 46 1e-04
BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding pro... 46 1e-04
AY644767-1|AAV85455.1| 156|Homo sapiens cell proliferation-indu... 46 1e-04
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 46 1e-04
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 46 1e-04
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 46 1e-04
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 46 1e-04
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 46 1e-04
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 46 1e-04
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 46 1e-04
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 46 1e-04
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 46 1e-04
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 46 1e-04
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 46 1e-04
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 46 1e-04
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 45 3e-04
D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein ... 45 3e-04
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 45 3e-04
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 45 3e-04
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 45 3e-04
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 44 4e-04
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 44 4e-04
AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein. 44 4e-04
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 44 4e-04
L26405-1|AAA58677.1| 359|Homo sapiens huc protein. 44 6e-04
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 43 0.001
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 43 0.001
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 43 0.001
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 43 0.001
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 43 0.001
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 43 0.001
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 43 0.001
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 43 0.001
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 43 0.001
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 43 0.001
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 43 0.001
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 43 0.001
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 43 0.001
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 43 0.001
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 43 0.001
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 43 0.001
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 43 0.001
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 42 0.002
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 42 0.002
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 42 0.002
D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein. 42 0.002
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 42 0.002
BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma... 42 0.002
BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma... 42 0.002
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 42 0.002
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 42 0.002
AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma... 42 0.002
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 42 0.002
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 42 0.002
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 42 0.002
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 42 0.003
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 42 0.003
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 42 0.003
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 42 0.003
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 42 0.003
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 42 0.003
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 42 0.003
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 42 0.003
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 42 0.003
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 42 0.003
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 42 0.003
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 42 0.003
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 42 0.003
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 42 0.003
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 42 0.003
AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein. 42 0.003
BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein. 41 0.004
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 41 0.004
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 41 0.004
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 41 0.004
AB075858-1|BAB85564.1| 384|Homo sapiens KIAA1978 protein protein. 41 0.004
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 41 0.004
BC126261-1|AAI26262.1| 593|Homo sapiens FLJ20273 protein protein. 41 0.006
BC034402-1|AAH34402.1| 497|Homo sapiens FLJ20273 protein protein. 41 0.006
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 41 0.006
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 41 0.006
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 41 0.006
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 41 0.006
AK000280-1|BAA91049.1| 524|Homo sapiens protein ( Homo sapiens ... 41 0.006
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 41 0.006
AF262323-1|AAM21973.1| 593|Homo sapiens RNA-binding protein pro... 41 0.006
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 41 0.006
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 41 0.006
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 40 0.010
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 40 0.010
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 40 0.010
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 40 0.010
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 40 0.010
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 40 0.010
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 40 0.010
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 40 0.010
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 40 0.010
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 40 0.010
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 40 0.010
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 40 0.010
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 40 0.010
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 40 0.010
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 40 0.010
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 40 0.013
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 40 0.013
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 40 0.013
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 40 0.013
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 40 0.013
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 39 0.017
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 39 0.017
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 39 0.017
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 39 0.017
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 39 0.017
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 39 0.017
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 39 0.017
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 39 0.017
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 39 0.017
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 39 0.017
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 39 0.017
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 39 0.017
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 39 0.017
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 39 0.017
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 39 0.017
BC117315-1|AAI17316.1| 433|Homo sapiens RBMS3 protein protein. 39 0.022
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 39 0.022
AY236872-1|AAP75556.1| 419|Homo sapiens RNA binding motif singl... 39 0.022
AY236871-1|AAP75555.1| 437|Homo sapiens RNA binding motif singl... 39 0.022
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 39 0.022
AF023259-1|AAC63910.1| 411|Homo sapiens RNA-binding protein pro... 39 0.022
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 38 0.030
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 38 0.030
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 38 0.039
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 38 0.039
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 38 0.039
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 38 0.039
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 38 0.039
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 38 0.039
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 38 0.039
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 38 0.039
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 38 0.039
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 38 0.039
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 38 0.039
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 38 0.039
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 38 0.039
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 38 0.039
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 38 0.039
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 38 0.039
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 38 0.039
X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein. 38 0.052
X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein. 38 0.052
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 38 0.052
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 38 0.052
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 38 0.052
D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein. 38 0.052
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 38 0.052
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 38 0.052
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 38 0.052
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 38 0.052
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 38 0.052
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 38 0.052
BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, sing... 38 0.052
BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, sing... 38 0.052
BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, sing... 38 0.052
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 38 0.052
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 38 0.052
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 38 0.052
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 38 0.052
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 38 0.052
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 38 0.052
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 38 0.052
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 38 0.052
AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein... 38 0.052
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 38 0.052
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 38 0.052
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 38 0.052
AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein... 38 0.052
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 38 0.052
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 38 0.052
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 38 0.052
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 38 0.052
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 38 0.052
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 38 0.052
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 38 0.052
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 38 0.052
AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein. 38 0.052
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 38 0.052
D28483-1|BAA05842.1| 407|Homo sapiens SCR3 protein. 37 0.068
D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein. 37 0.068
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 37 0.068
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 37 0.068
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 37 0.068
BC072679-1|AAH72679.1| 407|Homo sapiens RNA binding motif, sing... 37 0.068
BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation ... 37 0.068
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 37 0.068
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 37 0.068
BC027863-1|AAH27863.1| 407|Homo sapiens RNA binding motif, sing... 37 0.068
BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation ... 37 0.068
BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation ... 37 0.068
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 37 0.068
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 37 0.068
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 37 0.068
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 37 0.068
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 37 0.068
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 37 0.068
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 37 0.068
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 37 0.068
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 37 0.068
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 37 0.068
AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein. 37 0.068
AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spli... 37 0.068
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 37 0.068
AC005057-2|AAS07440.1| 136|Homo sapiens unknown protein. 37 0.068
AC005057-1|AAS07439.1| 156|Homo sapiens unknown protein. 37 0.068
D82351-1|BAA11561.1| 373|Homo sapiens MSSP-1 protein. 37 0.090
BC026077-1|AAH26077.1| 161|Homo sapiens RBMY2FP protein protein. 37 0.090
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 37 0.090
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 37 0.090
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 37 0.090
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 37 0.090
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 36 0.12
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 36 0.12
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 36 0.12
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 36 0.12
BC012457-1|AAH12457.1| 227|Homo sapiens Similar to nucleolar pr... 36 0.12
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 36 0.12
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 36 0.12
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 36 0.12
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 36 0.12
AL109946-1|CAO72051.1| 153|Homo sapiens nuclear cap binding pro... 36 0.12
AF284423-1|AAG14457.1| 140|Homo sapiens RNA-binding protein BRU... 36 0.12
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 36 0.12
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 36 0.21
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 36 0.21
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 36 0.21
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 36 0.21
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 36 0.21
BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementatio... 36 0.21
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 36 0.21
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 36 0.21
AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation... 36 0.21
AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation... 36 0.21
AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation... 36 0.21
AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation... 36 0.21
AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation... 36 0.21
AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation... 36 0.21
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 36 0.21
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 36 0.21
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 36 0.21
AK000324-1|BAA91086.1| 431|Homo sapiens protein ( Homo sapiens ... 36 0.21
AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating pr... 36 0.21
AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating pr... 36 0.21
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 36 0.21
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 36 0.21
AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementatio... 36 0.21
AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementatio... 36 0.21
AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementatio... 36 0.21
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 36 0.21
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 36 0.21
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 35 0.28
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 35 0.28
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 35 0.28
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 35 0.28
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 35 0.28
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 35 0.28
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 35 0.28
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 35 0.28
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 35 0.28
AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein pro... 35 0.28
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 35 0.28
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 34 0.48
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 34 0.48
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 34 0.48
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 34 0.48
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 34 0.48
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 34 0.48
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 34 0.48
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 34 0.48
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 34 0.48
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 34 0.48
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 34 0.48
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 34 0.48
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 34 0.48
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 34 0.48
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 34 0.48
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 34 0.48
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 34 0.48
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 34 0.48
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 34 0.48
Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor, arginine... 34 0.64
L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor ... 34 0.64
BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor, argini... 34 0.64
BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor, argini... 34 0.64
BC019319-1|AAH19319.1| 190|Homo sapiens RNA binding motif prote... 34 0.64
BC008942-1|AAH08942.1| 190|Homo sapiens RNA binding motif prote... 34 0.64
BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor, argini... 34 0.64
AL162424-7|CAI14706.1| 190|Homo sapiens RNA binding motif prote... 34 0.64
AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing facto... 34 0.64
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 33 0.84
U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous ribonucleop... 33 0.84
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 33 0.84
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 33 0.84
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 33 0.84
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 33 0.84
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 33 0.84
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 33 0.84
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 33 0.84
DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein. 33 0.84
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 33 0.84
CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein. 33 0.84
BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomeras... 33 0.84
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 33 0.84
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 33 0.84
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 33 0.84
BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.84
BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.84
BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.84
BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.84
BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.84
BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.84
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 33 0.84
BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.84
BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomeras... 33 0.84
BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.84
BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomeras... 33 0.84
BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.84
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 33 0.84
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 33 0.84
AL049824-4|CAI19350.1| 301|Homo sapiens peptidylprolyl isomeras... 33 0.84
AL049824-2|CAI19348.1| 296|Homo sapiens peptidylprolyl isomeras... 33 0.84
AL049824-1|CAI19347.1| 314|Homo sapiens peptidylprolyl isomeras... 33 0.84
AL035404-8|CAI19579.1| 301|Homo sapiens peptidylprolyl isomeras... 33 0.84
AL035404-6|CAI19577.1| 296|Homo sapiens peptidylprolyl isomeras... 33 0.84
AL035404-5|CAI19576.1| 314|Homo sapiens peptidylprolyl isomeras... 33 0.84
AL033527-11|CAI19410.1| 296|Homo sapiens peptidylprolyl isomera... 33 0.84
AL033527-10|CAI19409.1| 314|Homo sapiens peptidylprolyl isomera... 33 0.84
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 33 0.84
AF104013-1|AAD19907.1| 296|Homo sapiens peptidyl-prolyl cis-tra... 33 0.84
AF104012-1|AAD19906.1| 301|Homo sapiens peptidyl-prolyl cis-tra... 33 0.84
AF042386-1|AAC00007.1| 296|Homo sapiens cyclophilin-33B protein. 33 0.84
AF042385-1|AAC00006.1| 301|Homo sapiens cyclophilin-33A protein. 33 0.84
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 33 0.84
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 33 0.84
BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein. 33 1.1
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 33 1.1
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 33 1.1
BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein MG... 33 1.1
BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein. 33 1.1
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 33 1.1
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 33 1.1
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 33 1.1
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 33 1.1
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 33 1.1
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 33 1.1
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 33 1.1
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 33 1.1
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 33 1.1
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 33 1.1
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 33 1.1
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 33 1.1
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 33 1.1
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 33 1.1
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 33 1.1
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 33 1.1
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 33 1.1
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 33 1.1
AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein. 33 1.1
DQ294957-1|ABB99396.1| 119|Homo sapiens coactivator regulator p... 33 1.5
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 33 1.5
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 33 1.5
BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 33 1.5
BC000488-1|AAH00488.1| 669|Homo sapiens RBM14 protein protein. 33 1.5
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 33 1.5
AK222830-1|BAD96550.1| 669|Homo sapiens RNA binding motif prote... 33 1.5
AF315633-1|AAK77962.1| 156|Homo sapiens coactivator modulator p... 33 1.5
AF315632-1|AAK77961.1| 669|Homo sapiens coactivator activator p... 33 1.5
AF080561-1|AAC64058.1| 669|Homo sapiens SYT interacting protein... 33 1.5
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 32 1.9
BC030025-1|AAH30025.1| 252|Homo sapiens TIAL1 protein protein. 32 1.9
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.9
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.9
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.9
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 32 1.9
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 32 1.9
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 32 1.9
AB209260-1|BAD92497.1| 183|Homo sapiens TIA1 cytotoxic granule-... 32 1.9
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 32 2.6
X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for ... 32 2.6
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 32 2.6
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 32 2.6
M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen... 32 2.6
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 32 2.6
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 32 2.6
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 32 2.6
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 32 2.6
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 32 2.6
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 32 2.6
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 32 2.6
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 32 2.6
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 32 2.6
U73168-1|AAB42216.1| 698|Homo sapiens partial CDS, human putati... 31 3.4
U23946-1|AAA99715.1| 815|Homo sapiens LUCA15 protein. 31 3.4
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 31 3.4
BC033838-1|AAH33838.1| 368|Homo sapiens BRUNOL6 protein protein. 31 3.4
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 31 3.4
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 31 3.4
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 31 3.4
AK131098-1|BAC85148.1| 376|Homo sapiens FLJ00324 protein protein. 31 3.4
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 31 3.4
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 31 3.4
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 31 3.4
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 31 3.4
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 31 3.4
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 31 3.4
AF248649-1|AAF86231.1| 83|Homo sapiens RNA-binding protein BRU... 31 3.4
AF103802-1|AAF02422.2| 815|Homo sapiens lung cancer tumor suppr... 31 3.4
AF091263-1|AAD04159.1| 815|Homo sapiens RNA binding motif prote... 31 3.4
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 31 3.4
AB209434-1|BAD92671.1| 305|Homo sapiens BRUNO-like 6 RNA-bindin... 31 3.4
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 31 5.9
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b, sub... 31 5.9
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b, sub... 31 5.9
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
U03469-1|AAC52063.1| 477|Homo sapiens glucagon receptor protein. 30 7.8
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 30 7.8
L20316-1|AAA53628.1| 477|Homo sapiens glucagon receptor protein. 30 7.8
BC112041-1|AAI12042.1| 477|Homo sapiens glucagon receptor protein. 30 7.8
BC104854-1|AAI04855.1| 477|Homo sapiens glucagon receptor protein. 30 7.8
BC028588-1|AAH28588.1| 533|Homo sapiens hypothetical protein MG... 30 7.8
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 217 bits (529), Expect = 5e-56
Identities = 117/265 (44%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Frame = -1
Query: 754 EVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 575
EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 574 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 398
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 397 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 269
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQN 14
AI ++G GYDHLILNVEW+KP N
Sbjct: 296 AIAGVSGFGYDHLILNVEWAKPSTN 320
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 217 bits (529), Expect = 5e-56
Identities = 117/265 (44%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Frame = -1
Query: 754 EVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 575
EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 574 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 398
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 397 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 269
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQN 14
AI ++G GYDHLILNVEW+KP N
Sbjct: 296 AIAGVSGFGYDHLILNVEWAKPSTN 320
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 217 bits (529), Expect = 5e-56
Identities = 117/265 (44%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Frame = -1
Query: 754 EVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 575
EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 574 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 398
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 397 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 269
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQN 14
AI ++G GYDHLILNVEW+KP N
Sbjct: 296 AIAGVSGFGYDHLILNVEWAKPSTN 320
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 217 bits (529), Expect = 5e-56
Identities = 117/265 (44%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Frame = -1
Query: 754 EVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 575
EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 574 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 398
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 397 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 269
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQN 14
AI ++G GYDHLILNVEW+KP N
Sbjct: 296 AIAGVSGFGYDHLILNVEWAKPSTN 320
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 217 bits (529), Expect = 5e-56
Identities = 117/265 (44%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Frame = -1
Query: 754 EVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 575
EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 574 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 398
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 397 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 269
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQN 14
AI ++G GYDHLILNVEW+KP N
Sbjct: 296 AIAGVSGFGYDHLILNVEWAKPSTN 320
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 217 bits (529), Expect = 5e-56
Identities = 117/265 (44%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Frame = -1
Query: 754 EVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 575
EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 574 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 398
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 397 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 269
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQN 14
AI ++G GYDHLILNVEW+KP N
Sbjct: 296 AIAGVSGFGYDHLILNVEWAKPSTN 320
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 217 bits (529), Expect = 5e-56
Identities = 117/265 (44%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Frame = -1
Query: 754 EVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 575
EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 574 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 398
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 397 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 269
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R DAA+
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 295
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQN 14
AI ++G GYDHLILNVEW+KP N
Sbjct: 296 AIAGVSGFGYDHLILNVEWAKPSTN 320
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 215 bits (524), Expect = 2e-55
Identities = 116/265 (43%), Positives = 151/265 (56%), Gaps = 18/265 (6%)
Frame = -1
Query: 754 EVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNP 575
EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D PGPN
Sbjct: 58 EVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNV 117
Query: 574 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHT- 398
ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP+K T
Sbjct: 118 ATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175
Query: 397 ---------QIXXXXXX-----XXXXXXXXXXXASNKYIPPS---SAGRIPGRDQPPVRR 269
Q+ + KY+PPS A R QP R
Sbjct: 176 GPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQPNRRA 235
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
+D IR++NLS E D+ +L + FG + ++YLAK+K+TG KGFA++ F R D A+
Sbjct: 236 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDRAR 295
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQN 14
AI ++G GYDHLILNVEW+KP N
Sbjct: 296 AIAGVSGFGYDHLILNVEWAKPSTN 320
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 47.6 bits (108), Expect = 5e-05
Identities = 27/103 (26%), Positives = 53/103 (51%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ TG +GFA+V+F+ D+ +A++ NG D + V++S
Sbjct: 153 DQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 47.6 bits (108), Expect = 5e-05
Identities = 27/103 (26%), Positives = 53/103 (51%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ TG +GFA+V+F+ D+ +A++ NG D + V++S
Sbjct: 153 DQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 47.6 bits (108), Expect = 5e-05
Identities = 27/103 (26%), Positives = 53/103 (51%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ TG +GFA+V+F+ D+ +A++ NG D + V++S
Sbjct: 153 DQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 47.6 bits (108), Expect = 5e-05
Identities = 27/103 (26%), Positives = 53/103 (51%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S + P S+ R G P + T + + LS + E D+ ++ +GP+ + +
Sbjct: 96 SRSHSPMSNRRRHTGSRANP---DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVY 152
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ TG +GFA+V+F+ D+ +A++ NG D + V++S
Sbjct: 153 DQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYS 195
>X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric cap
binding complex CBC protein.
Length = 156
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ NLS + E I +L G + K+ + +K GF +V + RADA A++ +NG
Sbjct: 44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYING 103
Query: 67 HGYDHLILNVEW 32
D I+ +W
Sbjct: 104 TRLDDRIIRTDW 115
>BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ NLS + E I +L G + K+ + +K GF +V + RADA A++ +NG
Sbjct: 44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYING 103
Query: 67 HGYDHLILNVEW 32
D I+ +W
Sbjct: 104 TRLDDRIIRTDW 115
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = -1
Query: 307 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 128
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 386 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 445
Query: 127 AYVHFKFRADAAKAIQSLNGHGYDHLILNV 38
A++ F F A KA ++G + +L+V
Sbjct: 446 AFITFMFPEHAVKAYSEVDGQVFQGRMLHV 475
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC---KGFAYVHFKFRADAAKAIQS 77
I NL+ E + ++ G V ++K+K+ GF +V ++ A KA++
Sbjct: 734 IKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQ 793
Query: 76 LNGHGYDHLILNVEWSK 26
L GH D L V S+
Sbjct: 794 LQGHVVDGHKLEVRISE 810
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = -1
Query: 307 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 128
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 386 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 445
Query: 127 AYVHFKFRADAAKAIQSLNGHGYDHLILNV 38
A++ F F A KA ++G + +L+V
Sbjct: 446 AFITFMFPEHAVKAYSEVDGQVFQGRMLHV 475
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC---KGFAYVHFKFRADAAKAIQS 77
I NL+ E + ++ G V ++K+K+ GF +V ++ A KA++
Sbjct: 734 IKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQ 793
Query: 76 LNGHGYDHLILNVEWSK 26
L GH D L V S+
Sbjct: 794 LQGHVVDGHKLEVRISE 810
>BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ NLS + E I +L G + K+ + +K GF +V + RADA A++ +NG
Sbjct: 44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYING 103
Query: 67 HGYDHLILNVEW 32
D I+ +W
Sbjct: 104 TRLDDRIIRTDW 115
>AY644767-1|AAV85455.1| 156|Homo sapiens cell
proliferation-inducing gene 55 protein.
Length = 156
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ NLS + E I +L G + K+ + +K GF +V + RADA A++ +NG
Sbjct: 44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYING 103
Query: 67 HGYDHLILNVEW 32
D I+ +W
Sbjct: 104 TRLDDRIIRTDW 115
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = -1
Query: 307 GRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGF 128
GRI G ++ + + + NL + E D++ L +GP+ +L+ + T KGF
Sbjct: 399 GRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGF 458
Query: 127 AYVHFKFRADAAKAIQSLNGHGYDHLILNV 38
A++ F F A KA ++G + +L+V
Sbjct: 459 AFITFMFPEHAVKAYSEVDGQVFQGRMLHV 488
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC---KGFAYVHFKFRADAAKAIQS 77
I NL+ E + ++ G V ++K+K+ GF +V ++ A KA++
Sbjct: 747 IKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQ 806
Query: 76 LNGHGYDHLILNVEWSK 26
L GH D L V S+
Sbjct: 807 LQGHVVDGHKLEVRISE 823
>CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A A++ LNG ++V+W
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDW 148
>BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A A++ LNG ++V+W
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDW 148
>BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A A++ LNG ++V+W
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDW 148
>AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A A++ LNG ++V+W
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDW 148
>AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14
protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A A++ LNG ++V+W
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDW 148
>AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif protein
8B protein.
Length = 158
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 46 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 105
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A A++ LNG ++V+W
Sbjct: 106 ETYKEAQAAMEGLNGQDLMGQPISVDW 132
>AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif protein
8A protein.
Length = 173
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 61 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 120
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A A++ LNG ++V+W
Sbjct: 121 ETYKEAQAAMEGLNGQDLMGQPISVDW 147
>AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif protein
8 protein.
Length = 173
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 61 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 120
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A A++ LNG ++V+W
Sbjct: 121 ETYKEAQAAMEGLNGQDLMGQPISVDW 147
>AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein.
Length = 158
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 46 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 105
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A A++ LNG ++V+W
Sbjct: 106 ETYKEAQAAMEGLNGQDLMGQPISVDW 132
>AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A A++ LNG ++V+W
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDW 148
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+SNL +ADI +L FG + K + ++S G G A VHF+ +ADA KA++ NG
Sbjct: 86 VSNLDFGVSDADIQELFAEFGTLKKAAVHYDRS-GRSLGTANVHFERKADALKAMKQYNG 144
Query: 67 HGYDHLILNVE 35
D +N++
Sbjct: 145 FPLDGRPMNIQ 155
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
IS L + D++D+ FG + + +++TG +G A++ F R++A +AI S NG
Sbjct: 110 ISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG 169
Query: 67 H 65
H
Sbjct: 170 H 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I I NL A E + + FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 73 NGHGYDHLILNVEW 32
NG+ IL V +
Sbjct: 306 NGYRLGDKILQVSF 319
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G V L ++K GH G+ +V++ DA +AI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 80 TLNGLRLQSKTIKVSYARP 98
>D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein 1
protein.
Length = 156
Score = 45.2 bits (102), Expect = 3e-04
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ NLS + E I +L G + K+ + +K GF +V + RADA +++ +NG
Sbjct: 44 VGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENSMRYING 103
Query: 67 HGYDHLILNVEW 32
D I+ +W
Sbjct: 104 TRLDDRIIRTDW 115
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
IS L + D++D+ FG + + +++TG +G A++ F R++A +AI S NG
Sbjct: 110 ISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG 169
Query: 67 H 65
H
Sbjct: 170 H 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I I NL A E + + FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 73 NGHGYDHLILNVEW 32
NG+ IL V +
Sbjct: 306 NGYRLGDKILQVSF 319
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G V L ++K GH G+ +V++ DA +AI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 80 TLNGLRLQSKTIKVSYARP 98
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 45.2 bits (102), Expect = 3e-04
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
IS L + D++D+ FG + + +++TG +G A++ F R++A +AI S NG
Sbjct: 110 ISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNG 169
Query: 67 H 65
H
Sbjct: 170 H 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I I NL A E + + FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 73 NGHGYDHLILNVEW 32
NG+ IL V +
Sbjct: 306 NGYRLGDKILQVSF 319
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G V L ++K GH G+ +V++ DA +AI
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 80 TLNGLRLQSKTIKVSYARP 98
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 44.8 bits (101), Expect = 3e-04
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+SNL +ADI +L FG + K + ++S G G A VHF+ +ADA KA++ NG
Sbjct: 110 VSNLDFGVSDADIQELFAEFGTLKKAAVHYDRS-GRSLGTADVHFERKADALKAMKQYNG 168
Query: 67 HGYDHLILNVE 35
D +N++
Sbjct: 169 VPLDGRPMNIQ 179
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -1
Query: 289 DQP-PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
D+P P R + + ++ + A E DI D +G + ++L ++ TG+ KG+ V +
Sbjct: 62 DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEY 121
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEW 32
+ +A ++ LNG ++V+W
Sbjct: 122 ETYKEAQAVMEGLNGQDLMGQPISVDW 148
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 44.4 bits (100), Expect = 4e-04
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS A E+ + L FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345
Query: 73 NGHGYDHLILNVEWSKPPQN 14
NG+ +L V + Q+
Sbjct: 346 NGYRLGERVLQVSFKTSKQH 365
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + + L G + L ++K TG G+ +V++ DA KAI
Sbjct: 39 TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAIN 98
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 99 TLNGLKLQTKTIKVSYARP 117
>AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein.
Length = 360
Score = 44.4 bits (100), Expect = 4e-04
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS A E+ + L FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 279 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 338
Query: 73 NGHGYDHLILNVEWSKPPQN 14
NG+ +L V + Q+
Sbjct: 339 NGYRLGERVLQVSFKTSKQH 358
Score = 37.9 bits (84), Expect = 0.039
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + + L G + L ++K TG G+ +V++ DA KAI
Sbjct: 39 TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDADKAIN 98
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 99 TLNGLKLQTKTIKVSYARP 117
>AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein.
Length = 318
Score = 44.4 bits (100), Expect = 4e-04
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS A E+ + L FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 237 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 296
Query: 73 NGHGYDHLILNVEWSKPPQN 14
NG+ +L V + Q+
Sbjct: 297 NGYRLGERVLQVSFKTSKQH 316
Score = 37.9 bits (84), Expect = 0.039
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = -1
Query: 214 DIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVE 35
+ L G + L ++K TG G+ +V++ DA KAI +LNG + V
Sbjct: 5 EFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVS 64
Query: 34 WSKP 23
+++P
Sbjct: 65 YARP 68
>L26405-1|AAA58677.1| 359|Homo sapiens huc protein.
Length = 359
Score = 44.0 bits (99), Expect = 6e-04
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS A E+ + L FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 337
Query: 73 NGHGYDHLILNVEWSKPPQN 14
NG+ +L V + Q+
Sbjct: 338 NGYRLAERVLQVSFKTSKQH 357
Score = 37.9 bits (84), Expect = 0.039
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + + L G + L ++K TG G+ +V++ DA KAI
Sbjct: 39 TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDADKAIN 98
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 99 TLNGLKLQTKTIKVSYARP 117
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/79 (26%), Positives = 39/79 (49%)
Frame = -1
Query: 250 RISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 71
R+ N+ A E + D+ GPV L ++ TG KG+ + ++ + A A+++LN
Sbjct: 10 RVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 69
Query: 70 GHGYDHLILNVEWSKPPQN 14
G + L V+ + +N
Sbjct: 70 GREFSGRALRVDNAASEKN 88
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L+ E ++ + +G + ++ L K++ T +GFA+V F+ ADA A + +NG
Sbjct: 12 IGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNG 71
Query: 67 HGYDHLILNVEWSKPP 20
D + VE + P
Sbjct: 72 KSLDGKAIKVEQATKP 87
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L+ E ++ + +G + ++ L K++ T +GFA+V F+ ADA A + +NG
Sbjct: 12 IGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNG 71
Query: 67 HGYDHLILNVEWSKPP 20
D + VE + P
Sbjct: 72 KSLDGKAIKVEQATKP 87
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L+ E ++ + +G + ++ L K++ T +GFA+V F+ ADA A + +NG
Sbjct: 12 IGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNG 71
Query: 67 HGYDHLILNVEWSKPP 20
D + VE + P
Sbjct: 72 KSLDGKAIKVEQATKP 87
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L+ E ++ + +G + ++ L K++ T +GFA+V F+ ADA A + +NG
Sbjct: 12 IGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNG 71
Query: 67 HGYDHLILNVEWSKPP 20
D + VE + P
Sbjct: 72 KSLDGKAIKVEQATKP 87
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L+ E ++ + +G + ++ L K++ T +GFA+V F+ ADA A + +NG
Sbjct: 12 IGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNG 71
Query: 67 HGYDHLILNVEWSKPP 20
D + VE + P
Sbjct: 72 KSLDGKAIKVEQATKP 87
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 359 NGYRLGDRVLQVSF 372
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAITSL 344
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 345 NGYRLGDRVLQVSF 358
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L+ E ++ + +G + ++ L K++ T +GFA+V F+ ADA A + +NG
Sbjct: 12 IGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNG 71
Query: 67 HGYDHLILNVEWSKPP 20
D + VE + P
Sbjct: 72 KSLDGKAIKVEQATKP 87
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L+ E ++ + +G + ++ L K++ T +GFA+V F+ ADA A + +NG
Sbjct: 12 IGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNG 71
Query: 67 HGYDHLILNVEWSKPP 20
D + VE + P
Sbjct: 72 KSLDGKAIKVEQATKP 87
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L+ E ++ + +G + ++ L K++ T +GFA+V F+ ADA A + +NG
Sbjct: 12 IGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNG 71
Query: 67 HGYDHLILNVEWSKPP 20
D + VE + P
Sbjct: 72 KSLDGKAIKVEQATKP 87
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 359 NGYRLGDRVLQVSF 372
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 345 NGYRLGDRVLQVSF 358
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 362 NGYRLGDRVLQVSF 375
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 35 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 94
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 95 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 141
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 345 NGYRLGDRVLQVSF 358
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L+ E ++ + +G + ++ L K++ T +GFA+V F+ ADA A + +NG
Sbjct: 12 IGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNG 71
Query: 67 HGYDHLILNVEWSKPP 20
D + VE + P
Sbjct: 72 KSLDGKAIKVEQATKP 87
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 364 NGYRLGDRVLQVSF 377
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 23 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 82
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 83 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 129
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 350 NGYRLGDRVLQVSF 363
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 23 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 82
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 83 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 129
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 359 NGYRLGDRVLQVSF 372
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 345 NGYRLGDRVLQVSF 358
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 362 NGYRLGDRVLQVSF 375
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 35 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 94
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 95 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 141
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 345 NGYRLGDRVLQVSF 358
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 364 NGYRLGDRVLQVSF 377
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 23 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 82
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 83 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 129
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 350 NGYRLGDRVLQVSF 363
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 23 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 82
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 83 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 129
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 359 NGYRLGDRVLQVSF 372
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 345 NGYRLGDRVLQVSF 358
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 362 NGYRLGDRVLQVSF 375
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 35 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 94
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 95 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 141
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS + E+ + L FG V+ + + ++ +T CKGF +V +AA AI SL
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 345 NGYRLGDRVLQVSF 358
Score = 40.7 bits (91), Expect = 0.006
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = -1
Query: 337 SNKYIPPSSAGR-IPGRDQPPVRREDV-TAIRISNLSNFAVEADIDDLVKGFGPVHKLYL 164
SN PSS R P Q +D T + ++ L + + L G + L
Sbjct: 18 SNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKL 77
Query: 163 AKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
++K TG G+ +V++ DA KAI +LNG + V +++P
Sbjct: 78 VRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 124
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 42.7 bits (96), Expect = 0.001
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L+ E ++ + +G + ++ L K++ T +GFA+V F+ ADA A + +NG
Sbjct: 12 IGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNG 71
Query: 67 HGYDHLILNVEWSKPP 20
D + VE + P
Sbjct: 72 KSLDGKAIKVEQATKP 87
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = -1
Query: 280 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 100 DAAKAIQSLNGHGYDHLILNVEWSKPPQN 14
A A+++LNG + L V+ + +N
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNAASEKN 97
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = -1
Query: 280 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 100 DAAKAIQSLNGHGYDHLILNVEWSKPPQN 14
A A+++LNG + L V+ + +N
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNAASEKN 97
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = -1
Query: 280 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 100 DAAKAIQSLNGHGYDHLILNVEWSKPPQN 14
A A+++LNG + L V+ + +N
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNAASEKN 97
>D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein.
Length = 963
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
IS L + +++++ K G V L L ++ G KG AYV ++ + A++A+ ++G
Sbjct: 805 ISGLPFSCTKEELEEICKAHGTVKDLRLVTNRA-GKPKGLAYVEYENESQASQAVMKMDG 863
Query: 67 HGYDHLILNVEWSKPPQ 17
I+ V S PPQ
Sbjct: 864 MTIKENIIKVAISNPPQ 880
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = -1
Query: 280 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 100 DAAKAIQSLNGHGYDHLILNVEWSKPPQN 14
A A+++LNG + L V+ + +N
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNAASEKN 97
>BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
IS L + +++++ K G V L L ++ G KG AYV ++ + A++A+ ++G
Sbjct: 805 ISGLPFSCTKEELEEICKAHGTVKDLRLVTNRA-GKPKGLAYVEYENESQASQAVMKMDG 863
Query: 67 HGYDHLILNVEWSKPPQ 17
I+ V S PPQ
Sbjct: 864 MTIKENIIKVAISNPPQ 880
>BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
IS L + +++++ K G V L L ++ G KG AYV ++ + A++A+ ++G
Sbjct: 805 ISGLPFSCTKEELEEICKAHGTVKDLRLVTNRA-GKPKGLAYVEYENESQASQAVMKMDG 863
Query: 67 HGYDHLILNVEWSKPPQ 17
I+ V S PPQ
Sbjct: 864 MTIKENIIKVAISNPPQ 880
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = -1
Query: 280 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 8 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 67
Query: 100 DAAKAIQSLNGHGYDHLILNVEWSKPPQN 14
A A+++LNG + L V+ + +N
Sbjct: 68 TALSAMRNLNGREFSGRALRVDNAASEKN 96
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = -1
Query: 280 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
P + ++ + N+ A E + D+ GPV L ++ TG KG+ + ++ +
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 100 DAAKAIQSLNGHGYDHLILNVEWSKPPQN 14
A A+++LNG + L V+ + +N
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNAASEKN 97
>AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma
antigen SART-3 protein.
Length = 963
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
IS L + +++++ K G V L L ++ G KG AYV ++ + A++A+ ++G
Sbjct: 805 ISGLPFSCTKEELEEICKAHGTVKDLRLVTNRA-GKPKGLAYVEYENESQASQAVMKMDG 863
Query: 67 HGYDHLILNVEWSKPPQ 17
I+ V S PPQ
Sbjct: 864 MTIKENIIKVAISNPPQ 880
>BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein.
Length = 214
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R +D + + +LS DI FG + + K+ +TG KG+ +V F + DA
Sbjct: 101 RSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 160
Query: 94 AKAIQSLNGHGYDHLILNVEWS--KPP 20
AIQ + G + W+ KPP
Sbjct: 161 ENAIQQMGGQWLGGRQIRTNWATRKPP 187
>AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein.
Length = 386
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R +D + + +LS DI FG + + K+ +TG KG+ +V F + DA
Sbjct: 101 RSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 160
Query: 94 AKAIQSLNGHGYDHLILNVEWS--KPP 20
AIQ + G + W+ KPP
Sbjct: 161 ENAIQQMGGQWLGGRQIRTNWATRKPP 187
>AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant
protein.
Length = 464
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R +D + + +LS DI FG + + K+ +TG KG+ +V F + DA
Sbjct: 139 RSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 198
Query: 94 AKAIQSLNGHGYDHLILNVEWS--KPP 20
AIQ + G + W+ KPP
Sbjct: 199 ENAIQQMGGQWLGGRQIRTNWATRKPP 225
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R ++ T + I N + + DL FGP + + ++S G KGF +V F+ DA
Sbjct: 161 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDA 219
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 220 QKAVDEMNG 228
Score = 35.1 bits (77), Expect = 0.28
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I I NL + D FG + + +++ KG+ +VHF+ +
Sbjct: 66 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYGFVHFETQ 123
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 124 EAAERAIEKMNG 135
Score = 33.9 bits (74), Expect = 0.64
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 26
GP+ + + ++ T G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 10 GPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 63
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 258 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSS 317
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 318 PEEATKAVTEMNG 330
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R ++ T + I N + + DL FGP + + ++S G KGF +V F+ DA
Sbjct: 186 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVDEMNG 253
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPVRIMWSQ 88
Score = 35.1 bits (77), Expect = 0.28
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I I NL + D FG + + +++ KG+ +VHF+ +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYGFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 149 EAAERAIEKMNG 160
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/103 (24%), Positives = 51/103 (49%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ + +GFA+V+F+ DA +A + NG D + V++S
Sbjct: 152 DQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/103 (24%), Positives = 51/103 (49%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ + +GFA+V+F+ DA +A + NG D + V++S
Sbjct: 152 DQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 41.5 bits (93), Expect = 0.003
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL+ A E+ + + FG V + + ++ +T CKGF +V +AA AI+SL
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSL 324
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 325 NGYRLGDRVLQVSF 338
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G + L ++K TG G+ +V++ DA KAI
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 99 TLNGLRLQTKTIKVSYARP 117
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 41.5 bits (93), Expect = 0.003
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL+ A E+ + + FG V + + ++ +T CKGF +V +AA AI+SL
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSL 337
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 338 NGYRLGDRVLQVSF 351
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G + L ++K TG G+ +V++ DA KAI
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 99 TLNGLRLQTKTIKVSYARP 117
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R ++ T + I N + + DL FGP + + ++S G KGF +V F+ DA
Sbjct: 186 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVDEMNG 253
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPVRIMWSQ 88
Score = 35.1 bits (77), Expect = 0.28
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I I NL + D FG + + +++ KG+ +VHF+ +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYGFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 149 EAAERAIEKMNG 160
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R ++ T + I N + + DL FGP + + ++S G KGF +V F+ DA
Sbjct: 186 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVDEMNG 253
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPVRIMWSQ 88
Score = 35.1 bits (77), Expect = 0.28
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I I NL + D FG + + +++ KG+ +VHF+ +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYGFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 149 EAAERAIEKMNG 160
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R ++ T + I N + + DL FGP + + ++S G KGF +V F+ DA
Sbjct: 186 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVDEMNG 253
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPVRIMWSQ 88
Score = 35.1 bits (77), Expect = 0.28
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I I NL + D FG + + +++ KG+ +VHF+ +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYGFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 149 EAAERAIEKMNG 160
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/103 (24%), Positives = 51/103 (49%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ + +GFA+V+F+ DA +A + NG D + V++S
Sbjct: 152 DQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/103 (24%), Positives = 51/103 (49%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ + +GFA+V+F+ DA +A + NG D + V++S
Sbjct: 152 DQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/103 (24%), Positives = 51/103 (49%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ + +GFA+V+F+ DA +A + NG D + V++S
Sbjct: 152 DQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/103 (24%), Positives = 51/103 (49%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 59 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 115
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ + +GFA+V+F+ DA +A + NG D + V++S
Sbjct: 116 DQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 158
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/103 (24%), Positives = 51/103 (49%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 95 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 151
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ + +GFA+V+F+ DA +A + NG D + V++S
Sbjct: 152 DQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/103 (24%), Positives = 51/103 (49%)
Frame = -1
Query: 337 SNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAK 158
S+ + P S+ R G P + + + LS + E D+ ++ +GP+ + +
Sbjct: 83 SHSHSPMSTRRRHVGNRANP---DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVY 139
Query: 157 EKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 29
++ + +GFA+V+F+ DA +A + NG D + V++S
Sbjct: 140 DQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 182
>AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein.
Length = 704
Score = 41.5 bits (93), Expect = 0.003
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I+N+ + ++LV+ +G + + +L + TGH KG+ +V + + AAKA L G
Sbjct: 172 ITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKARLELLG 231
Query: 67 HGYDHLILNVEW 32
L +W
Sbjct: 232 RQLGASALFAQW 243
>BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein.
Length = 606
Score = 41.1 bits (92), Expect = 0.004
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
++NL + ++LV+ FG + + +L + TG KG+ + + + AA+A L G
Sbjct: 136 VANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLG 195
Query: 67 HGYDHLILNVEWSKPPQ 17
L V W+ Q
Sbjct: 196 KPLGPRTLYVHWTDAGQ 212
>BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = -1
Query: 274 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE-SE 96
Query: 100 DAAKAI-QSLNGHGYDHLILNVEWSKP 23
D AK + +++N + + +L + P
Sbjct: 97 DVAKIVAETMNNYLFGERLLECHFMPP 123
>BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = -1
Query: 274 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE-SE 96
Query: 100 DAAKAI-QSLNGHGYDHLILNVEWSKP 23
D AK + +++N + + +L + P
Sbjct: 97 DVAKIVAETMNNYLFGERLLECHFMPP 123
>AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein.
Length = 293
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = -1
Query: 274 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE-SE 96
Query: 100 DAAKAI-QSLNGHGYDHLILNVEWSKP 23
D AK + +++N + + +L + P
Sbjct: 97 DVAKIVAETMNNYLFGERLLECHFMPP 123
>AB075858-1|BAB85564.1| 384|Homo sapiens KIAA1978 protein protein.
Length = 384
Score = 41.1 bits (92), Expect = 0.004
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
++NL + ++LV+ FG + + +L + TG KG+ + + + AA+A L G
Sbjct: 57 VANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLG 116
Query: 67 HGYDHLILNVEWSKPPQ 17
L V W+ Q
Sbjct: 117 KPLGPRTLYVHWTDAGQ 133
>AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotein
Nopp34 protein.
Length = 293
Score = 41.1 bits (92), Expect = 0.004
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = -1
Query: 274 RREDVT--AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
++E +T + + +L N E I FG V + L++ K TG+ KG+A+V F+
Sbjct: 38 KQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFE-SE 96
Query: 100 DAAKAI-QSLNGHGYDHLILNVEWSKP 23
D AK + +++N + + +L + P
Sbjct: 97 DVAKIVAETMNNYLFGERLLECHFMPP 123
>BC126261-1|AAI26262.1| 593|Homo sapiens FLJ20273 protein protein.
Length = 593
Score = 40.7 bits (91), Expect = 0.006
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -1
Query: 268 EDVT-AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 92
EDV ++I + N +E D + K FG + + + K + +A+VHF R DA
Sbjct: 239 EDVMETVKILYVRNLMIETTEDTIKKSFGQFNPGCVERVKKI---RDYAFVHFTSREDAV 295
Query: 91 KAIQSLNGHGYDHLILNVEWSKP 23
A+ +LNG + L V +KP
Sbjct: 296 HAMNNLNGTELEGSCLEVTLAKP 318
>BC034402-1|AAH34402.1| 497|Homo sapiens FLJ20273 protein protein.
Length = 497
Score = 40.7 bits (91), Expect = 0.006
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -1
Query: 268 EDVT-AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 92
EDV ++I + N +E D + K FG + + + K + +A+VHF R DA
Sbjct: 239 EDVMETVKILYVRNLMIETTEDTIKKSFGQFNPGCVERVKKI---RDYAFVHFTSREDAV 295
Query: 91 KAIQSLNGHGYDHLILNVEWSKP 23
A+ +LNG + L V +KP
Sbjct: 296 HAMNNLNGTELEGSCLEVTLAKP 318
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 40.7 bits (91), Expect = 0.006
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL+ A E+ + + FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 324
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 325 NGYRLGDRVLQVSF 338
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G + L ++K TG G+ +V++ DA KAI
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 99 TLNGLRLQTKTIKVSYARP 117
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 40.7 bits (91), Expect = 0.006
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL+ A E+ + + FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 306 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 365
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 366 NGYRLGDRVLQVSF 379
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G + L ++K TG G+ +V++ DA KAI
Sbjct: 67 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 126
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 127 TLNGLRLQTKTIKVSYARP 145
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 40.7 bits (91), Expect = 0.006
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL+ A E+ + + FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 338 NGYRLGDRVLQVSF 351
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G + L ++K TG G+ +V++ DA KAI
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 99 TLNGLRLQTKTIKVSYARP 117
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 40.7 bits (91), Expect = 0.006
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL+ A E+ + + FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 324
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 325 NGYRLGDRVLQVSF 338
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G + L ++K TG G+ +V++ DA KAI
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 99 TLNGLRLQTKTIKVSYARP 117
>AK000280-1|BAA91049.1| 524|Homo sapiens protein ( Homo sapiens
cDNA FLJ20273 fis, clone HEP01750. ).
Length = 524
Score = 40.7 bits (91), Expect = 0.006
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -1
Query: 268 EDVT-AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 92
EDV ++I + N +E D + K FG + + + K + +A+VHF R DA
Sbjct: 239 EDVMETVKILYVRNLMIETTEDTIKKSFGQFNPGCVERVKKI---RDYAFVHFTSREDAV 295
Query: 91 KAIQSLNGHGYDHLILNVEWSKP 23
A+ +LNG + L V +KP
Sbjct: 296 HAMNNLNGTELEGSCLEVTLAKP 318
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 40.7 bits (91), Expect = 0.006
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = -1
Query: 190 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPP 20
+G + ++ L K++ T +GFA+V F+ ADA A++ +NG D + V + P
Sbjct: 25 YGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRDMNGKSLDGKAIKVAQATKP 81
>AF262323-1|AAM21973.1| 593|Homo sapiens RNA-binding protein
protein.
Length = 593
Score = 40.7 bits (91), Expect = 0.006
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -1
Query: 268 EDVT-AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 92
EDV ++I + N +E D + K FG + + + K + +A+VHF R DA
Sbjct: 239 EDVMETVKILYVRNLMIETTEDTIKKSFGQFNPGCVERVKKI---RDYAFVHFTSREDAV 295
Query: 91 KAIQSLNGHGYDHLILNVEWSKP 23
A+ +LNG + L V +KP
Sbjct: 296 HAMNNLNGTELEGSCLEVTLAKP 318
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/73 (26%), Positives = 40/73 (54%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ LS + E D+ ++ +GP+ + + ++ + +GFA+V+F+ DA +A + NG
Sbjct: 22 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 81
Query: 67 HGYDHLILNVEWS 29
D + V++S
Sbjct: 82 MELDGRRIRVDFS 94
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 40.7 bits (91), Expect = 0.006
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL+ A E+ + + FG V + + ++ +T CKGF +V +AA AI SL
Sbjct: 286 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 345
Query: 73 NGHGYDHLILNVEW 32
NG+ +L V +
Sbjct: 346 NGYRLGDRVLQVSF 359
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G + L ++K TG G+ +V++ DA KAI
Sbjct: 47 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 106
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 107 TLNGLRLQTKTIKVSYARP 125
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 39.9 bits (89), Expect = 0.010
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NLS ++ + L FG V + + ++ +T CKGF ++ +AA AI SL
Sbjct: 269 IFVYNLSPEPDQSVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFMTMTNYDEAAMAIASL 328
Query: 73 NGHGYDHLILNVEWSKPPQN 14
NG+ +L V + Q+
Sbjct: 329 NGYRLGQRVLQVSFKTSKQH 348
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + + L G + L ++K TG G+ +V++ DA KAI
Sbjct: 30 TNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAIN 89
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 90 TLNGLKLQTKTIKVSYARP 108
>BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein.
Length = 410
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 173 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 224
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 225 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRK 262
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -1
Query: 220 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGH 65
E ++ L + GP+ L L + TG +G+A+V F + A +A++ N H
Sbjct: 23 EDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNH 74
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/89 (22%), Positives = 41/89 (46%)
Frame = -1
Query: 280 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
P + ++ + N+ A E + D+ G V L ++ TG KG+ + ++ +
Sbjct: 9 PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 100 DAAKAIQSLNGHGYDHLILNVEWSKPPQN 14
A A+++LNG + L V+ + +N
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNAASEKN 97
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 361 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 412
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 413 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKKK 450
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 198 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 257
Query: 79 SLNGH 65
N H
Sbjct: 258 LYNNH 262
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 325 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 376
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 377 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKKK 414
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 79 SLNGH 65
N H
Sbjct: 222 LYNNH 226
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/89 (22%), Positives = 41/89 (46%)
Frame = -1
Query: 280 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
P + ++ + N+ A E + D+ G V L ++ TG KG+ + ++ +
Sbjct: 9 PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 100 DAAKAIQSLNGHGYDHLILNVEWSKPPQN 14
A A+++LNG + L V+ + +N
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNAASEKN 97
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 325 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 376
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 377 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRK 414
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 79 SLNGH 65
N H
Sbjct: 222 LYNNH 226
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 325 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 376
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 377 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRK 414
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 79 SLNGH 65
N H
Sbjct: 222 LYNNH 226
>AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 189
Score = 39.9 bits (89), Expect = 0.010
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + ++ L + ++ L G + L ++K TG G+ +V++ DA KAI
Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 98
Query: 79 SLNGHGYDHLILNVEWSKP 23
+LNG + V +++P
Sbjct: 99 TLNGLRLQTKTIKVSYARP 117
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 325 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 376
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 377 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRK 414
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 79 SLNGH 65
N H
Sbjct: 222 LYNNH 226
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 325 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 376
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 377 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRK 414
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 79 SLNGH 65
N H
Sbjct: 222 LYNNH 226
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 325 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 376
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 377 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRK 414
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 79 SLNGH 65
N H
Sbjct: 222 LYNNH 226
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 325 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 376
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 377 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRK 414
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 79 SLNGH 65
N H
Sbjct: 222 LYNNH 226
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 325 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 376
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 377 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRK 414
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 79 SLNGH 65
N H
Sbjct: 222 LYNNH 226
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 39.9 bits (89), Expect = 0.010
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = -1
Query: 298 PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYV 119
P D P V + + NL+N E + L K F KL K+ K +A++
Sbjct: 297 PIEDPDPEVMAKVKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFI 348
Query: 118 HFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN*K 5
HF R A KA++ +NG + + + ++KPP K
Sbjct: 349 HFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRK 386
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 134 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 193
Query: 79 SLNGH 65
N H
Sbjct: 194 LYNNH 198
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 39.5 bits (88), Expect = 0.013
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = -1
Query: 238 LSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ NF + D + L FGP + + ++S G KGF +V F+ DA KA+ +NG
Sbjct: 195 IKNFGEDMDDERLKDLFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNG 250
Score = 35.5 bits (78), Expect = 0.21
Identities = 18/79 (22%), Positives = 40/79 (50%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPVRIMWSQ 88
Score = 35.1 bits (77), Expect = 0.28
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I I NL + D FG + + +++ KG+ +VHF+ +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYGFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 149 EAAERAIEKMNG 160
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 280 MKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSS 339
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 340 PEEATKAVTEMNG 352
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 39.5 bits (88), Expect = 0.013
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPP 20
GP+ ++ L K++ T +GFA++ F+ ADA A + +NG + VE +K P
Sbjct: 32 GPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKKP 86
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 39.5 bits (88), Expect = 0.013
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = -1
Query: 220 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 41
E ++D FGP+ ++ + K++ T +GF ++ F A+ A++++NG D +
Sbjct: 19 EQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIR 78
Query: 40 VE 35
V+
Sbjct: 79 VD 80
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 39.5 bits (88), Expect = 0.013
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPP 20
GP+ ++ L K++ T +GFA++ F+ ADA A + +NG + VE +K P
Sbjct: 32 GPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKKP 86
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 39.5 bits (88), Expect = 0.013
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = -1
Query: 220 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 41
E ++D FGP+ ++ + K++ T +GF ++ F A+ A++++NG D +
Sbjct: 19 EQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIR 78
Query: 40 VE 35
V+
Sbjct: 79 VD 80
>X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein.
Length = 419
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPP 20
GP+ ++ L K++ T +GFA++ F+ ADA A + +NG + VE +K P
Sbjct: 32 GPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGTSLHGKAIKVEQAKKP 86
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L N+ + + +L+ FGP+ L K+ +TG KG+A+ + +AI LNG
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNG 322
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 39.1 bits (87), Expect = 0.017
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ +LS DI FG + + K+ +TG KG+ +V F + DA AI + G
Sbjct: 101 VGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGG 160
Query: 67 HGYDHLILNVEWS--KPP 20
+ W+ KPP
Sbjct: 161 QWLGGRQIRTNWATRKPP 178
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/81 (25%), Positives = 33/81 (40%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ NLS E I L GP + E ++ + +V F DAA A+ ++NG
Sbjct: 13 VGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSND--PYCFVEFYEHRDAAAALAAMNG 70
Query: 67 HGYDHLILNVEWSKPPQNN*K 5
+ V W+ P + K
Sbjct: 71 RKILGKEVKVNWATTPSSQKK 91
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 39.1 bits (87), Expect = 0.017
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ +LS DI FG + + K+ +TG KG+ +V F + DA AI + G
Sbjct: 62 VGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGG 121
Query: 67 HGYDHLILNVEWS--KPP 20
+ W+ KPP
Sbjct: 122 QWLGGRQIRTNWATRKPP 139
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 39.1 bits (87), Expect = 0.017
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R ++ + I N + + DL FGP + + ++S G KGF +V F+ DA
Sbjct: 186 RAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVDEMNG 253
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I + NL + D V FG + + +++ KG+ +VHF+
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGS--KGYGFVHFETH 148
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 149 EAAERAIKKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T ++ NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 MKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 256 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQS 77
++ + +L EA + + GP+ + + ++ T +AYV+F+ DA A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71
Query: 76 LNGHGYDHLILNVEWSK 26
+N + + WS+
Sbjct: 72 MNFDVIKGKPVRIMWSQ 88
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 39.1 bits (87), Expect = 0.017
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -1
Query: 190 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPP 20
+G + ++ L K++ T +GFA+V F+ ADA A + +NG D + V + P
Sbjct: 31 YGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQATKP 87
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 39.1 bits (87), Expect = 0.017
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R ++ + I N + + DL FGP + + ++S G KGF +V F+ DA
Sbjct: 186 RAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVDEMNG 253
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I + NL + D V FG + + +++ KG+ +VHF+
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGS--KGYGFVHFETH 148
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 149 EAAERAIKKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T ++ NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 MKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 256 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQS 77
++ + +L EA + + GP+ + + ++ T +AYV+F+ DA A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71
Query: 76 LNGHGYDHLILNVEWSK 26
+N + + WS+
Sbjct: 72 MNFDVIKGKPVRIMWSQ 88
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L N+ + + +L+ FGP+ L K+ +TG KG+A+ + +AI LNG
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNG 322
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPP 20
GP+ ++ L K++ T +GFA++ F+ ADA A + +NG + VE +K P
Sbjct: 32 GPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGTSLHGKAIKVEQAKKP 86
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 39.1 bits (87), Expect = 0.017
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R ++ + I N + + DL FGP + + ++S G KGF +V F+ DA
Sbjct: 186 RAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVDEMNG 253
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I + NL + D V FG + + +++ KG+ +VHF+
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGS--KGYGFVHFETH 148
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 149 EAAERAIKKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T ++ NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 MKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 256 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQS 77
++ + +L EA + + GP+ + + ++ T +AYV+F+ DA A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71
Query: 76 LNGHGYDHLILNVEWSK 26
+N + + WS+
Sbjct: 72 MNFDVIKGKPVRIMWSQ 88
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.017
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I L N+ + + +L+ FGP+ L K+ +TG KG+A+ + +AI LNG
Sbjct: 263 IGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNG 322
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.017
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ +LS DI FG + + K+ +TG KG+ +V F + DA AI + G
Sbjct: 101 VGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGG 160
Query: 67 HGYDHLILNVEWS--KPP 20
+ W+ KPP
Sbjct: 161 QWLGGRQIRTNWATRKPP 178
Score = 31.1 bits (67), Expect = 4.5
Identities = 21/81 (25%), Positives = 33/81 (40%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ NLS E I L GP + E ++ + +V F DAA A+ ++NG
Sbjct: 13 VGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSND--PYCFVEFYEHRDAAAALAAMNG 70
Query: 67 HGYDHLILNVEWSKPPQNN*K 5
+ V W+ P + K
Sbjct: 71 RKILGKEVKVNWATTPSSQKK 91
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 39.1 bits (87), Expect = 0.017
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R ++ + I N + + DL FGP + + ++S G KGF +V F+ DA
Sbjct: 186 RAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVDEMNG 253
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I + NL + D V FG + + +++ KG+ +VHF+
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGS--KGYGFVHFETH 148
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 149 EAAERAIKKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T ++ NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 MKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 256 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQS 77
++ + +L EA + + GP+ + + ++ T +AYV+F+ DA A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71
Query: 76 LNGHGYDHLILNVEWSK 26
+N + + WS+
Sbjct: 72 MNFDVIKGKPVRIMWSQ 88
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 39.1 bits (87), Expect = 0.017
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R ++ + I N + + DL FGP + + ++S G KGF +V F+ DA
Sbjct: 186 RAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVDEMNG 253
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I + NL + D V FG + + +++ KG+ +VHF+
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGS--KGYGFVHFETH 148
Query: 103 ADAAKAIQSLNG 68
A +AI+ +NG
Sbjct: 149 EAAERAIKKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFKF 107
++++ +T ++ NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 MKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -1
Query: 256 AIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQS 77
++ + +L EA + + GP+ + + ++ T +AYV+F+ DA A+ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71
Query: 76 LNGHGYDHLILNVEWSK 26
+N + + WS+
Sbjct: 72 MNFDVIKGKPVRIMWSQ 88
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 39.1 bits (87), Expect = 0.017
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -1
Query: 190 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPP 20
+G + ++ L K++ T +GFA+V F+ ADA A + +NG D + V + P
Sbjct: 31 YGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQATKP 87
>BC117315-1|AAI17316.1| 433|Homo sapiens RBMS3 protein protein.
Length = 433
Score = 38.7 bits (86), Expect = 0.022
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 61 TNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVA 120
Query: 79 SLNGHG 62
SL +G
Sbjct: 121 SLKANG 126
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 38.7 bits (86), Expect = 0.022
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -1
Query: 322 PPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PP +AG + + + D +I + N+ A +++ G G V+++ + +K +G
Sbjct: 152 PPGNAGPVIMSIEEKMEA-DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 210
Query: 142 HCKGFAYVHF 113
H KGFAY+ F
Sbjct: 211 HPKGFAYIEF 220
>AY236872-1|AAP75556.1| 419|Homo sapiens RNA binding motif single
stranded interacting protein 3 isoform transcript vari
protein.
Length = 419
Score = 38.7 bits (86), Expect = 0.022
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 60 TNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKALLDKNTNQCKGYGFVDFDSPAAAQKAVA 119
Query: 79 SLNGHG 62
SL +G
Sbjct: 120 SLKANG 125
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ +D T + ISNL E ++++++K FGPV + ++ + G +G + +
Sbjct: 134 QEQDPTNLYISNLPISMDEQELENMLKPFGPVISTRILRD-ANGVSRGVGFARMESTEKC 192
Query: 94 AKAIQSLNG 68
IQ NG
Sbjct: 193 EVVIQHFNG 201
>AY236871-1|AAP75555.1| 437|Homo sapiens RNA binding motif single
stranded interacting protein 3 isoform transcript vari
protein.
Length = 437
Score = 38.7 bits (86), Expect = 0.022
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 61 TNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVA 120
Query: 79 SLNGHG 62
SL +G
Sbjct: 121 SLKANG 126
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 38.7 bits (86), Expect = 0.022
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -1
Query: 322 PPSSAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PP +AG + + + D +I + N+ A +++ G G V+++ + +K +G
Sbjct: 152 PPGNAGPVIMSIEEKMEA-DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 210
Query: 142 HCKGFAYVHF 113
H KGFAY+ F
Sbjct: 211 HPKGFAYIEF 220
>AF023259-1|AAC63910.1| 411|Homo sapiens RNA-binding protein
protein.
Length = 411
Score = 38.7 bits (86), Expect = 0.022
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 52 TNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVA 111
Query: 79 SLNGHG 62
SL +G
Sbjct: 112 SLKANG 117
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 38.3 bits (85), Expect = 0.030
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
+ L A +++L GPV + ++ EK + C+GF YV F D +A++ +
Sbjct: 8 VGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65
Score = 37.1 bits (82), Expect = 0.068
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I NLS E D+ + FG V ++ + + K G +GF +V FK +A KA++ +N
Sbjct: 118 IRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALKGMNM 176
Query: 67 HGYDHLILNVEWS 29
+ V+W+
Sbjct: 177 KEIKGRTVAVDWA 189
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
I NLS + E ++ +L++ FG + + + T H KG A+ F + A K +
Sbjct: 339 IRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCL 393
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 38.3 bits (85), Expect = 0.030
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
+ L A +++L GPV + ++ EK + C+GF YV F D +A++ +
Sbjct: 8 VGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65
Score = 37.1 bits (82), Expect = 0.068
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I NLS E D+ + FG V ++ + + K G +GF +V FK +A KA++ +N
Sbjct: 118 IRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALKGMNM 176
Query: 67 HGYDHLILNVEWS 29
+ V+W+
Sbjct: 177 KEIKGRTVAVDWA 189
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
I NLS + E ++ +L++ FG + + + T H KG A+ F + A K +
Sbjct: 339 IRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCL 393
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.039
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL E D++DL +G + ++ L K+ FA+V F+ DA AI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAEDAIYGR 72
Query: 73 NGHGYDHLILNVEWSK 26
NG+ Y L VE+ +
Sbjct: 73 NGYDYGQCRLRVEFPR 88
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 37.9 bits (84), Expect = 0.039
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPP 20
GP+ ++ L K++ T +GFA++ F+ ADA A + +NG + VE ++ P
Sbjct: 32 GPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAQKP 86
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.039
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL E D++DL +G + ++ L K+ FA+V F+ DA AI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAEDAIYGR 72
Query: 73 NGHGYDHLILNVEWSK 26
NG+ Y L VE+ +
Sbjct: 73 NGYDYGQCRLRVEFPR 88
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.039
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ LS E ++ + +G + ++ + K++ T +GF +V F+ DA A+ ++NG
Sbjct: 10 VGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 69
Query: 67 HGYDHLILNVEWSKPPQNN 11
D + V+ + +N
Sbjct: 70 KSVDGRQIRVDQAGKSSDN 88
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.039
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ LS E ++ + +G + ++ + K++ T +GF +V F+ DA A+ ++NG
Sbjct: 10 VGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 69
Query: 67 HGYDHLILNVEWSKPPQNN 11
D + V+ + +N
Sbjct: 70 KSVDGRQIRVDQAGKSSDN 88
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.039
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL E D++DL +G + ++ L K+ FA+V F+ DA AI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAEDAIYGR 72
Query: 73 NGHGYDHLILNVEWSK 26
NG+ Y L VE+ +
Sbjct: 73 NGYDYGQCRLRVEFPR 88
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.039
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL E D++DL +G + ++ L K+ FA+V F+ DA AI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAEDAIYGR 72
Query: 73 NGHGYDHLILNVEWSK 26
NG+ Y L VE+ +
Sbjct: 73 NGYDYGQCRLRVEFPR 88
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.039
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ LS E ++ + +G + ++ + K++ T +GF +V F+ DA A+ ++NG
Sbjct: 10 VGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 69
Query: 67 HGYDHLILNVEWSKPPQNN 11
D + V+ + +N
Sbjct: 70 KSVDGRQIRVDQAGKSSDN 88
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.039
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ LS E ++ + +G + ++ + K++ T +GF +V F+ DA A+ ++NG
Sbjct: 10 VGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 69
Query: 67 HGYDHLILNVEWSKPPQNN 11
D + V+ + +N
Sbjct: 70 KSVDGRQIRVDQAGKSSDN 88
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 37.9 bits (84), Expect = 0.039
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R + T I + NL E + DL FG + + + ++ S GH + F +V+F+ +A
Sbjct: 186 RALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNS-GHSRCFGFVNFEKHEEA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVVHMNG 253
Score = 36.7 bits (81), Expect = 0.090
Identities = 17/79 (21%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++ +T G+AY++F+ ADA +A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFEMLKGQPIRIMWSQ 88
Score = 33.9 bits (74), Expect = 0.64
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I I NL + + D FG + +A ++ +GF +VHF+
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETH 148
Query: 103 ADAAKAIQSLNG 68
A +AI ++NG
Sbjct: 149 EAAQQAINTMNG 160
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 37.9 bits (84), Expect = 0.039
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R + T I + NL E + DL FG + + + ++ S GH + F +V+F+ +A
Sbjct: 186 RALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNS-GHSRCFGFVNFEKHEEA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVVHMNG 253
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 286 QPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFK 110
Q +RR + + NL + D D L K F P + AK + G H KGF +V F
Sbjct: 285 QDRLRRYQGVNLYVKNLDD---SIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFS 341
Query: 109 FRADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 342 SPEEATKAVTEMNG 355
Score = 36.7 bits (81), Expect = 0.090
Identities = 17/79 (21%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++ +T G+AY++F+ ADA +A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFEMLKGQPIRIMWSQ 88
Score = 33.9 bits (74), Expect = 0.64
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I I NL + + D FG + +A ++ +GF +VHF+
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETH 148
Query: 103 ADAAKAIQSLNG 68
A +AI ++NG
Sbjct: 149 EAAQQAINTMNG 160
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.039
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = -1
Query: 253 IRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
I + NL E D++DL +G + ++ L K+ FA+V F+ DA AI
Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIREIEL---KNRHGLVPFAFVRFEDPRDAEDAIYGR 72
Query: 73 NGHGYDHLILNVEWSK 26
NG+ Y L VE+ +
Sbjct: 73 NGYDYGQCRLRVEFPR 88
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 37.9 bits (84), Expect = 0.039
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R + T I + NL E + DL FG + + + ++ S GH + F +V+F+ +A
Sbjct: 186 RALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNS-GHSRCFGFVNFEKHEEA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVVHMNG 253
Score = 36.7 bits (81), Expect = 0.090
Identities = 17/79 (21%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++ +T G+AY++F+ ADA +A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFEMLKGQPIRIMWSQ 88
Score = 33.9 bits (74), Expect = 0.64
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I I NL + + D FG + +A ++ +GF +VHF+
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETH 148
Query: 103 ADAAKAIQSLNG 68
A +AI ++NG
Sbjct: 149 EAAQQAINTMNG 160
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 37.9 bits (84), Expect = 0.039
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
R + T I + NL E + DL FG + + + ++ S GH + F +V+F+ +A
Sbjct: 186 RALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNS-GHSRCFGFVNFEKHEEA 244
Query: 94 AKAIQSLNG 68
KA+ +NG
Sbjct: 245 QKAVVHMNG 253
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -1
Query: 286 QPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG-HCKGFAYVHFK 110
Q +RR + + NL + D D L K F P + AK + G H KGF +V F
Sbjct: 285 QDRLRRYQGVNLYVKNLDD---SIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFS 341
Query: 109 FRADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 342 SPEEATKAVTEMNG 355
Score = 36.7 bits (81), Expect = 0.090
Identities = 17/79 (21%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++ +T G+AY++F+ ADA +A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFEMLKGQPIRIMWSQ 88
Score = 33.9 bits (74), Expect = 0.64
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V I I NL + + D FG + +A ++ +GF +VHF+
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETH 148
Query: 103 ADAAKAIQSLNG 68
A +AI ++NG
Sbjct: 149 EAAQQAINTMNG 160
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 37.9 bits (84), Expect = 0.039
Identities = 19/89 (21%), Positives = 41/89 (46%)
Frame = -1
Query: 280 PVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRA 101
P + ++ + ++ A E + D+ G V L ++ TG KG+ + ++ +
Sbjct: 9 PAMDRSLRSVFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQE 68
Query: 100 DAAKAIQSLNGHGYDHLILNVEWSKPPQN 14
A A+++LNG + L V+ + +N
Sbjct: 69 TALSAMRNLNGREFSGRALRVDNAASEKN 97
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.039
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ LS E ++ + +G + ++ + K++ T +GF +V F+ DA A+ ++NG
Sbjct: 10 VGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 69
Query: 67 HGYDHLILNVEWSKPPQNN 11
D + V+ + +N
Sbjct: 70 KSVDGRQIRVDQAGKSSDN 88
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 37.9 bits (84), Expect = 0.039
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+ LS E ++ + +G + ++ + K++ T +GF +V F+ DA A+ ++NG
Sbjct: 10 VGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 69
Query: 67 HGYDHLILNVEWSKPPQNN 11
D + V+ + +N
Sbjct: 70 KSVDGRQIRVDQAGKSSDN 88
>X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein.
Length = 389
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 29 TNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVS 88
Query: 79 SLNGHG 62
+L G
Sbjct: 89 ALKASG 94
>X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein.
Length = 372
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 29 TNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVS 88
Query: 79 SLNGHG 62
+L G
Sbjct: 89 ALKASG 94
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 37.1 bits (82), Expect = 0.068
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 37.5 bits (83), Expect = 0.052
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 319 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 187 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 246
Query: 142 HCKGFAYVHFKFRADAAKAIQSLN 71
KG+ ++ ++ + A+ S+N
Sbjct: 247 KHKGYGFIEYEKAQSSQDAVSSMN 270
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 37.1 bits (82), Expect = 0.068
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein.
Length = 403
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 62 TNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVS 121
Query: 79 SLNGHG 62
+L G
Sbjct: 122 ALKASG 127
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 37.5 bits (83), Expect = 0.052
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 319 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 205 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 264
Query: 142 HCKGFAYVHFKFRADAAKAIQSLN 71
KG+ ++ ++ + A+ S+N
Sbjct: 265 KHKGYGFIEYEKAQSSQDAVSSMN 288
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 37.1 bits (82), Expect = 0.068
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 37.1 bits (82), Expect = 0.068
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 37.5 bits (83), Expect = 0.052
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = -1
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
ED + + L + I+ + G V + + KSTG KGFA+V F+ + AAK
Sbjct: 122 EDERTVYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAK 181
Query: 88 AIQSLN 71
AI+ LN
Sbjct: 182 AIEFLN 187
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 36.7 bits (81), Expect = 0.090
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
V + + NL+N E + L K F KL K+ K +A++HF R A KA+
Sbjct: 302 VKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFIHFDERDGAVKAM 353
Query: 82 QSLNGHGYDHLILNVEWSKPPQNN*K 5
+ +NG + + + ++KPP K
Sbjct: 354 EEMNGKDLEGENIEIVFAKPPDQKRK 379
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 79 SLNGH 65
N H
Sbjct: 222 LYNNH 226
>BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 406
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 62 TNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVS 121
Query: 79 SLNGHG 62
+L G
Sbjct: 122 ALKASG 127
>BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 403
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 62 TNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVS 121
Query: 79 SLNGHG 62
+L G
Sbjct: 122 ALKASG 127
>BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 403
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 62 TNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVS 121
Query: 79 SLNGHG 62
+L G
Sbjct: 122 ALKASG 127
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 37.5 bits (83), Expect = 0.052
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 319 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 162 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 221
Query: 142 HCKGFAYVHFKFRADAAKAIQSLN 71
KG+ ++ ++ + A+ S+N
Sbjct: 222 KHKGYGFIEYEKAQSSQDAVSSMN 245
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 37.5 bits (83), Expect = 0.052
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 319 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 162 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 221
Query: 142 HCKGFAYVHFKFRADAAKAIQSLN 71
KG+ ++ ++ + A+ S+N
Sbjct: 222 KHKGYGFIEYEKAQSSQDAVSSMN 245
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 37.5 bits (83), Expect = 0.052
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 319 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 145 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 204
Query: 142 HCKGFAYVHFKFRADAAKAIQSLN 71
KG+ ++ ++ + A+ S+N
Sbjct: 205 KHKGYGFIEYEKAQSSQDAVSSMN 228
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 37.5 bits (83), Expect = 0.052
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 319 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 188 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 247
Query: 142 HCKGFAYVHFKFRADAAKAIQSLN 71
KG+ ++ ++ + A+ S+N
Sbjct: 248 KHKGYGFIEYEKAQSSQDAVSSMN 271
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/90 (24%), Positives = 39/90 (43%)
Frame = -1
Query: 292 RDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
R P R + + + LS E + L + F + + ++ TG KGF +V F
Sbjct: 333 RGSPNARSQPSKTLFVKGLSEDTTE---ETLKESFDGSVRARIVTDRETGSSKGFGFVDF 389
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
DA A +++ D + ++W+KP
Sbjct: 390 NSEEDAKAAKEAMEDGEIDGNKVTLDWAKP 419
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/90 (24%), Positives = 39/90 (43%)
Frame = -1
Query: 292 RDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
R P R + + + LS E + L + F + + ++ TG KGF +V F
Sbjct: 333 RGSPNARSQPSKTLFVKGLSEDTTE---ETLKESFDGSVRARIVTDRETGSSKGFGFVDF 389
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
DA A +++ D + ++W+KP
Sbjct: 390 NSEEDAKAAKEAMEDGEIDGNKVTLDWAKP 419
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/90 (24%), Positives = 39/90 (43%)
Frame = -1
Query: 292 RDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
R P R + + + LS E + L + F + + ++ TG KGF +V F
Sbjct: 333 RGSPNARSQPSKTLFVKGLSEDTTE---ETLKESFDGSVRARIVTDRETGSSKGFGFVDF 389
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
DA A +++ D + ++W+KP
Sbjct: 390 NSEEDAKAAKEAMEDGEIDGNKVTLDWAKP 419
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
V + + NL+N E + L K F KL K+ K +A++HF R A KA+
Sbjct: 302 VKVLFVRNLANTVTE---EILEKAFSQFGKLERVKK-----LKDYAFIHFDERDGAVKAM 353
Query: 82 QSLNGHGYDHLILNVEWSKPPQNN*K 5
+ +NG + + + ++KPP K
Sbjct: 354 EEMNGKDLEGENIEIVFAKPPDQKRK 379
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T I + + E ++ L + GP+ L L + TG +G+A+V F + A +A++
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 79 SLNGH 65
N H
Sbjct: 222 LYNNH 226
>AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeceptor 116 (GPR116) protein.
Length = 129
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 37.1 bits (82), Expect = 0.068
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 37.1 bits (82), Expect = 0.068
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 37.1 bits (82), Expect = 0.068
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleg frame 148 protein.
Length = 129
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 37.1 bits (82), Expect = 0.068
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 37.1 bits (82), Expect = 0.068
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L + EA + + GPV + + ++ T G+AYV+F+ ADA +A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 82 QSLNGHGYDHLILNVEWSK 26
++N + + WS+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQ 88
Score = 37.1 bits (82), Expect = 0.068
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + D FG + + +++ KG+A+VHF+ +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGS--KGYAFVHFETQ 148
Query: 103 ADAAKAIQSLNG 68
A KAI+ +NG
Sbjct: 149 EAADKAIEKMNG 160
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = -1
Query: 274 RREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADA 95
+ ++ T + I N + + +L FG + + ++ + G KGF +V ++ DA
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDA 244
Query: 94 AKAIQSLNG 68
KA++ +NG
Sbjct: 245 NKAVEEMNG 253
Score = 32.7 bits (71), Expect = 1.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDD--LVKGFGPVHKLYLAKEK-STGHCKGFAYVHFKF 107
+++E ++ + NL ++ IDD L K F P + AK G KGF +V F
Sbjct: 283 LKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSS 342
Query: 106 RADAAKAIQSLNG 68
+A KA+ +NG
Sbjct: 343 PEEATKAVTEMNG 355
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/90 (24%), Positives = 39/90 (43%)
Frame = -1
Query: 292 RDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
R P R + + + LS E + L + F + + ++ TG KGF +V F
Sbjct: 454 RGSPNARSQPSKTLFVKGLSEDTTE---ETLKESFDGSVRARIVTDRETGSSKGFGFVDF 510
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
DA A +++ D + ++W+KP
Sbjct: 511 NSEEDAKAAKEAMEDGEIDGNKVTLDWAKP 540
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -1
Query: 232 NFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD 56
N + D+L + F ++ L + G+ KG AY+ FK ADA K + G D
Sbjct: 292 NLPYKVTQDELKEVFEDAAEIRLVSKD--GNSKGIAYIEFKTEADAEKTFEEKQGTEID 348
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/90 (24%), Positives = 39/90 (43%)
Frame = -1
Query: 292 RDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
R P R + + + LS E + L + F + + ++ TG KGF +V F
Sbjct: 538 RGSPNARSQPSKTLFVKGLSEDTTE---ETLKESFDGSVRARIVTDRETGSSKGFGFVDF 594
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
DA A +++ D + ++W+KP
Sbjct: 595 NSEEDAKAAKEAMEDGEIDGNKVTLDWAKP 624
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 232 NFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD 56
N + D+L + F ++ L + G KG AY+ FK ADA K + G D
Sbjct: 376 NLPYKVTQDELKEVFEDAAEIRLVSKD--GKSKGIAYIEFKTEADAEKTFEEKQGTEID 432
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 37.5 bits (83), Expect = 0.052
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 319 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 188 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 247
Query: 142 HCKGFAYVHFKFRADAAKAIQSLN 71
KG+ ++ ++ + A+ S+N
Sbjct: 248 KHKGYGFIEYEKAQSSQDAVSSMN 271
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 37.5 bits (83), Expect = 0.052
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 319 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 202 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 261
Query: 142 HCKGFAYVHFKFRADAAKAIQSLN 71
KG+ ++ ++ + A+ S+N
Sbjct: 262 KHKGYGFIEYEKAQSSQDAVSSMN 285
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 37.5 bits (83), Expect = 0.052
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -1
Query: 319 PSSAGRI-PGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 143
PS+ G+ P DQ I ++++ + DI + + FG + LA++ +TG
Sbjct: 205 PSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTG 264
Query: 142 HCKGFAYVHFKFRADAAKAIQSLN 71
KG+ ++ ++ + A+ S+N
Sbjct: 265 KHKGYGFIEYEKAQSSQDAVSSMN 288
>AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein.
Length = 188
Score = 37.5 bits (83), Expect = 0.052
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + +K+T CKG+ +V F A A KA+
Sbjct: 37 TNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVS 96
Query: 79 SLNGHG 62
+L G
Sbjct: 97 ALKASG 102
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/90 (24%), Positives = 39/90 (43%)
Frame = -1
Query: 292 RDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 113
R P R + + + LS E + L + F + + ++ TG KGF +V F
Sbjct: 561 RGSPNARSQPSKTLFVKGLSEDTTE---ETLKESFDGSVRARIVTDRETGSSKGFGFVDF 617
Query: 112 KFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
DA A +++ D + ++W+KP
Sbjct: 618 NSEEDAKAAKEAMEDGEIDGNKVTLDWAKP 647
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 232 NFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD 56
N + D+L + F ++ L + G KG AY+ FK ADA K + G D
Sbjct: 399 NLPYKVTQDELKEVFEDAAEIRLVSKD--GKSKGIAYIEFKTEADAEKTFEEKQGTEID 455
>D28483-1|BAA05842.1| 407|Homo sapiens SCR3 protein.
Length = 407
Score = 37.1 bits (82), Expect = 0.068
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = -1
Query: 322 PPSSAGRIPGRDQPPVRREDV--TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKS 149
PPS + P + + T + I L + D+ L + +G + +K+
Sbjct: 33 PPSPSNSTPNSSSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKT 92
Query: 148 TGHCKGFAYVHFKFRADAAKAIQSLNGHG 62
T CKG+ +V F + A KA+ +L G
Sbjct: 93 TNKCKGYGFVDFDSPSAAQKAVTALKASG 121
>D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein.
Length = 230
Score = 37.1 bits (82), Expect = 0.068
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = -1
Query: 313 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 134
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 26 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 84
Query: 133 GFAYVHFKFRADAAKAIQSLNG 68
GF YV F D+ K + +G
Sbjct: 85 GFCYVEFD-EVDSLKEALTYDG 105
>DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear
ribonucleoprotein-R2 protein.
Length = 595
Score = 37.1 bits (82), Expect = 0.068
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
E + +++ + N A + L K F KL K+ K +A+VHF+ R A K
Sbjct: 297 EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKK-----LKDYAFVHFEDRGAAVK 351
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQNN*K 5
A+ +NG + + + +KPP K
Sbjct: 352 AMDEMNGKEIEGEEIEIVLAKPPDKKRK 379
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 37.1 bits (82), Expect = 0.068
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
E + +++ + N A + L K F KL K+ K +A+VHF+ R A K
Sbjct: 315 EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKK-----LKDYAFVHFEDRGAAVK 369
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQNN*K 5
A+ +NG + + + +KPP K
Sbjct: 370 AMDEMNGKEIEGEEIEIVLAKPPDKKRK 397
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 37.1 bits (82), Expect = 0.068
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
E + +++ + N A + L K F KL K+ K +A+VHF+ R A K
Sbjct: 309 EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKK-----LKDYAFVHFEDRGAAVK 363
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQNN*K 5
A+ +NG + + + +KPP K
Sbjct: 364 AMDEMNGKEIEGEEIEIVLAKPPDKKRK 391
>BC072679-1|AAH72679.1| 407|Homo sapiens RNA binding motif, single
stranded interacting protein 2 protein.
Length = 407
Score = 37.1 bits (82), Expect = 0.068
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = -1
Query: 322 PPSSAGRIPGRDQPPVRREDV--TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKS 149
PPS + P + + T + I L + D+ L + +G + +K+
Sbjct: 33 PPSPSNSTPNSSSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKT 92
Query: 148 TGHCKGFAYVHFKFRADAAKAIQSLNGHG 62
T CKG+ +V F + A KA+ +L G
Sbjct: 93 TNKCKGYGFVDFDSPSAAQKAVTALKASG 121
>BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 37.1 bits (82), Expect = 0.068
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = -1
Query: 313 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 134
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 133 GFAYVHFKFRADAAKAIQSLNG 68
GF YV F D+ K + +G
Sbjct: 83 GFCYVEFD-EVDSLKEALTYDG 103
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.068
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -1
Query: 271 REDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 92
R T + + N+ + + + +L +GP + + ++ S G KGF +V ++ A
Sbjct: 195 RATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDAS-GKSKGFGFVRYETHEAAQ 253
Query: 91 KAIQSLNGHGYDHLILNV 38
KA+ L+G D +L V
Sbjct: 254 KAVLDLHGKSIDGKVLYV 271
Score = 33.5 bits (73), Expect = 0.84
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
GP+ + ++ T G+ YV+F+F ADA A+ ++N + + WS+P
Sbjct: 42 GPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQP 96
Score = 31.1 bits (67), Expect = 4.5
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRAD 98
+R+ V I I NL + L FG + + + + KG+AYVHF A
Sbjct: 100 LRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGS--KGYAYVHFDSLAA 157
Query: 97 AAKAIQSLNG 68
A +AI +NG
Sbjct: 158 ANRAIWHMNG 167
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 37.1 bits (82), Expect = 0.068
Identities = 18/79 (22%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++K T G+AYV+++ DA +A+
Sbjct: 44 MASLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVDAKRAL 103
Query: 82 QSLNGHGYDHLILNVEWSK 26
++LN + + WS+
Sbjct: 104 ETLNFDVIKGRPVRIMWSQ 122
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + ++ FG + +A ++ KG+ +VHF+ +
Sbjct: 125 PSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGP--KGYGFVHFQKQ 182
Query: 103 ADAAKAIQSLNG 68
A +AI +NG
Sbjct: 183 ESAERAIDVMNG 194
>BC027863-1|AAH27863.1| 407|Homo sapiens RNA binding motif, single
stranded interacting protein 2 protein.
Length = 407
Score = 37.1 bits (82), Expect = 0.068
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = -1
Query: 322 PPSSAGRIPGRDQPPVRREDV--TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKS 149
PPS + P + + T + I L + D+ L + +G + +K+
Sbjct: 33 PPSPSNSTPNSSSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKT 92
Query: 148 TGHCKGFAYVHFKFRADAAKAIQSLNGHG 62
T CKG+ +V F + A KA+ +L G
Sbjct: 93 TNKCKGYGFVDFDSPSAAQKAVTALKASG 121
>BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 37.1 bits (82), Expect = 0.068
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = -1
Query: 313 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 134
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 133 GFAYVHFKFRADAAKAIQSLNG 68
GF YV F D+ K + +G
Sbjct: 83 GFCYVEFD-EVDSLKEALTYDG 103
>BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 37.1 bits (82), Expect = 0.068
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = -1
Query: 313 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 134
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 133 GFAYVHFKFRADAAKAIQSLNG 68
GF YV F D+ K + +G
Sbjct: 83 GFCYVEFD-EVDSLKEALTYDG 103
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 37.1 bits (82), Expect = 0.068
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
E + +++ + N A + L K F KL K+ K +A+VHF+ R A K
Sbjct: 338 EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKK-----LKDYAFVHFEDRGAAVK 392
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQNN*K 5
A+ +NG + + + +KPP K
Sbjct: 393 AMDEMNGKEIEGEEIEIVLAKPPDKKRK 420
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 37.1 bits (82), Expect = 0.068
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -1
Query: 271 REDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 92
R T + + N+ + + + +L +GP + + ++ S G KGF +V ++ A
Sbjct: 31 RATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDAS-GKSKGFGFVRYETHEAAQ 89
Query: 91 KAIQSLNGHGYDHLILNV 38
KA+ L+G D +L V
Sbjct: 90 KAVLDLHGKSIDGKVLYV 107
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.068
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -1
Query: 271 REDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 92
R T + + N+ + + + +L +GP + + ++ S G KGF +V ++ A
Sbjct: 195 RATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDAS-GKSKGFGFVRYETHEAAQ 253
Query: 91 KAIQSLNGHGYDHLILNV 38
KA+ L+G D +L V
Sbjct: 254 KAVLDLHGKSIDGKVLYV 271
Score = 33.5 bits (73), Expect = 0.84
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
GP+ + ++ T G+ YV+F+F ADA A+ ++N + + WS+P
Sbjct: 42 GPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQP 96
Score = 31.1 bits (67), Expect = 4.5
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRAD 98
+R+ V I I NL + L FG + + + + KG+AYVHF A
Sbjct: 100 LRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGS--KGYAYVHFDSLAA 157
Query: 97 AAKAIQSLNG 68
A +AI +NG
Sbjct: 158 ANRAIWHMNG 167
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 37.1 bits (82), Expect = 0.068
Identities = 18/79 (22%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++K T G+AYV+++ DA +A+
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 82 QSLNGHGYDHLILNVEWSK 26
++LN + + WS+
Sbjct: 61 ETLNFDVIKGRPVRIMWSQ 79
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + ++ FG + +A ++ KG+ +VHF+ +
Sbjct: 82 PSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGP--KGYGFVHFQKQ 139
Query: 103 ADAAKAIQSLNG 68
A +AI +NG
Sbjct: 140 ESAERAIDVMNG 151
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 37.1 bits (82), Expect = 0.068
Identities = 18/79 (22%), Positives = 41/79 (51%)
Frame = -1
Query: 262 VTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
+ ++ + +L EA + + GP+ + + ++K T G+AYV+++ DA +A+
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 82 QSLNGHGYDHLILNVEWSK 26
++LN + + WS+
Sbjct: 61 ETLNFDVIKGRPVRIMWSQ 79
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -1
Query: 283 PPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFR 104
P +R+ V + I NL + ++ FG + +A ++ KG+ +VHF+ +
Sbjct: 82 PSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGP--KGYGFVHFQKQ 139
Query: 103 ADAAKAIQSLNG 68
A +AI +NG
Sbjct: 140 ESAERAIDVMNG 151
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 37.1 bits (82), Expect = 0.068
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -1
Query: 271 REDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 92
R T + + N+ + + + +L +GP + + ++ S G KGF +V ++ A
Sbjct: 180 RATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDAS-GKSKGFGFVRYETHEAAQ 238
Query: 91 KAIQSLNGHGYDHLILNV 38
KA+ L+G D +L V
Sbjct: 239 KAVLDLHGKSIDGKVLYV 256
Score = 33.5 bits (73), Expect = 0.84
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
GP+ + ++ T G+ YV+F+F ADA A+ ++N + + WS+P
Sbjct: 27 GPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQP 81
Score = 31.1 bits (67), Expect = 4.5
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRAD 98
+R+ V I I NL + L FG + + + + KG+AYVHF A
Sbjct: 85 LRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGS--KGYAYVHFDSLAA 142
Query: 97 AAKAIQSLNG 68
A +AI +NG
Sbjct: 143 ANRAIWHMNG 152
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 37.1 bits (82), Expect = 0.068
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
E + +++ + N A + L K F KL K+ K +A+VHF+ R A K
Sbjct: 338 EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKK-----LKDYAFVHFEDRGAAVK 392
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQNN*K 5
A+ +NG + + + +KPP K
Sbjct: 393 AMDEMNGKEIEGEEIEIVLAKPPDKKRK 420
>AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 37.1 bits (82), Expect = 0.068
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
E + +++ + N A + L K F KL K+ K +A+VHF+ R A K
Sbjct: 335 EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKK-----LKDYAFVHFEDRGAAVK 389
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQNN*K 5
A+ +NG + + + +KPP K
Sbjct: 390 AMDEMNGKEIEGEEIEIVLAKPPDKKRK 417
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 37.1 bits (82), Expect = 0.068
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 74
+ L A + +L GPV + ++ EK + C+GF YV F D +A++ +
Sbjct: 8 VGRLPPSARSEQLGELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65
Score = 37.1 bits (82), Expect = 0.068
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
I NLS E D+ + FG V ++ + + K G +GF +V FK +A KA++ +N
Sbjct: 118 IRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALKGMNM 176
Query: 67 HGYDHLILNVEWS 29
+ V+W+
Sbjct: 177 KEIKGRTVAVDWA 189
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -1
Query: 247 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 83
I NLS + E ++ +L++ FG + + + T H KG A+ F + A K +
Sbjct: 339 IRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCL 393
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.068
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -1
Query: 271 REDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAA 92
R T + + N+ + + + +L +GP + + ++ S G KGF +V ++ A
Sbjct: 195 RATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDAS-GKSKGFGFVRYETHEAAQ 253
Query: 91 KAIQSLNGHGYDHLILNV 38
KA+ L+G D +L V
Sbjct: 254 KAVLDLHGKSIDGKVLYV 271
Score = 33.5 bits (73), Expect = 0.84
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKP 23
GP+ + ++ T G+ YV+F+F ADA A+ ++N + + WS+P
Sbjct: 42 GPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQP 96
Score = 31.1 bits (67), Expect = 4.5
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -1
Query: 277 VRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRAD 98
+R+ V I I NL + L FG + + + + KG+AYVHF A
Sbjct: 100 LRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGS--KGYAYVHFDSLAA 157
Query: 97 AAKAIQSLNG 68
A +AI +NG
Sbjct: 158 ANRAIWHMNG 167
>AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein.
Length = 228
Score = 37.1 bits (82), Expect = 0.068
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = -1
Query: 313 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 134
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 133 GFAYVHFKFRADAAKAIQSLNG 68
GF YV F D+ K + +G
Sbjct: 83 GFCYVEFD-EVDSLKEALTYDG 103
>AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spliced
product protein.
Length = 248
Score = 37.1 bits (82), Expect = 0.068
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = -1
Query: 313 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 134
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 133 GFAYVHFKFRADAAKAIQSLNG 68
GF YV F D+ K + +G
Sbjct: 83 GFCYVEFD-EVDSLKEALTYDG 103
>AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 37.1 bits (82), Expect = 0.068
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 268 EDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAK 89
E + +++ + N A + L K F KL K+ K +A+VHF+ R A K
Sbjct: 335 EVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKK-----LKDYAFVHFEDRGAAVK 389
Query: 88 AIQSLNGHGYDHLILNVEWSKPPQNN*K 5
A+ +NG + + + +KPP K
Sbjct: 390 AMDEMNGKEIEGEEIEIVLAKPPDKKRK 417
>AC005057-2|AAS07440.1| 136|Homo sapiens unknown protein.
Length = 136
Score = 37.1 bits (82), Expect = 0.068
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = -1
Query: 313 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 134
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 133 GFAYVHFKFRADAAKAIQSLNG 68
GF YV F D+ K + +G
Sbjct: 83 GFCYVEFD-EVDSLKEALTYDG 103
>AC005057-1|AAS07439.1| 156|Homo sapiens unknown protein.
Length = 156
Score = 37.1 bits (82), Expect = 0.068
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = -1
Query: 313 SAGRIPGRDQPPVRREDVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCK 134
SAG R Q + E + NL V+ DID + K + + L ++K T K
Sbjct: 24 SAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFK 82
Query: 133 GFAYVHFKFRADAAKAIQSLNG 68
GF YV F D+ K + +G
Sbjct: 83 GFCYVEFD-EVDSLKEALTYDG 103
>D82351-1|BAA11561.1| 373|Homo sapiens MSSP-1 protein.
Length = 373
Score = 36.7 bits (81), Expect = 0.090
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -1
Query: 259 TAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 80
T + I L + D+ L + +G + K+T CKG+ +V F A A KA+
Sbjct: 29 TNLYIRGLPPHTTDQDLVKLCQPYGKIVSTNAILHKTTNKCKGYGFVDFDSPAAAQKAVS 88
Query: 79 SLNGHG 62
+L G
Sbjct: 89 ALKASG 94
>BC026077-1|AAH26077.1| 161|Homo sapiens RBMY2FP protein protein.
Length = 161
Score = 36.7 bits (81), Expect = 0.090
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = -1
Query: 187 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPP 20
GP+ ++ L K++ T +GFA+ F+ ADA A + + G D + VE +K P
Sbjct: 32 GPISEVLLIKDR-TSKSRGFAFTTFENTADAKNAAKHMIGKPLDGKAIKVEQAKKP 86
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.090
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -1
Query: 208 DDLVKG----FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+D+++G FG + + L K+ TG KG+ ++ F A +A++ LNG
Sbjct: 260 EDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 310
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.090
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -1
Query: 208 DDLVKG----FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+D+++G FG + + L K+ TG KG+ ++ F A +A++ LNG
Sbjct: 260 EDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 310
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 36.7 bits (81), Expect = 0.090
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -1
Query: 208 DDLVKG----FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+D+++G FG + + L K+ TG KG+ ++ F A +A++ LNG
Sbjct: 242 EDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 292
>AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.090
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -1
Query: 208 DDLVKG----FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 68
+D+++G FG + + L K+ TG KG+ ++ F A +A++ LNG
Sbjct: 254 EDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG 304
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 36.3 bits (80), Expect = 0.12
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = -1
Query: 322 PPSSAGRIPGRDQPPVRRE--DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKS 149
PP + + Q +RE D I I +L +++I + FG V + +++
Sbjct: 250 PPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRA 309
Query: 148 TGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN 11
T K F +V F A A AIQ++NG L V+ +P N
Sbjct: 310 TNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDAN 355
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 36.3 bits (80), Expect = 0.12
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = -1
Query: 322 PPSSAGRIPGRDQPPVRRE--DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKS 149
PP + + Q +RE D I I +L +++I + FG V + +++
Sbjct: 357 PPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRA 416
Query: 148 TGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN 11
T K F +V F A A AIQ++NG L V+ +P N
Sbjct: 417 TNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDAN 462
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 36.3 bits (80), Expect = 0.12
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = -1
Query: 322 PPSSAGRIPGRDQPPVRRE--DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKS 149
PP + + Q +RE D I I +L +++I + FG V + +++
Sbjct: 299 PPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRA 358
Query: 148 TGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN 11
T K F +V F A A AIQ++NG L V+ +P N
Sbjct: 359 TNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDAN 404
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 36.3 bits (80), Expect = 0.12
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = -1
Query: 322 PPSSAGRIPGRDQPPVRRE--DVTAIRISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKS 149
PP + + Q +RE D I I +L +++I + FG V + +++
Sbjct: 356 PPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRA 415
Query: 148 TGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQNN 11
T K F +V F A A AIQ++NG L V+ +P N
Sbjct: 416 TNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDAN 461
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,728,481
Number of Sequences: 237096
Number of extensions: 1886262
Number of successful extensions: 5333
Number of sequences better than 10.0: 461
Number of HSP's better than 10.0 without gapping: 4858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5318
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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