Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10i15f
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 179 2e-45
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 3e-41
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 147 8e-36
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 33 0.15
SB_26137| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.27) 31 0.62
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_10602| Best HMM Match : RVT_1 (HMM E-Value=1.3e-10) 30 1.4
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 28 5.8
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 5.8
SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 182 bits (443), Expect = 2e-46
Identities = 93/147 (63%), Positives = 107/147 (72%), Gaps = 2/147 (1%)
Frame = +2
Query: 221 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 400
MA AMKE TE L EERNLLSVAYKNVVGA+RSSWRVISSIEQK EGSERK+Q +
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTET 60
Query: 401 YRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSV 580
YR +E EL E+C VL LL+ LIP A + ESKVFYLKMKGDYYRY EVA + R V
Sbjct: 61 YRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEVAGADRRREV 120
Query: 581 VEDSQKAYQDAFEISK--AKMQPTHPI 655
V+ + KAY +A EI++ K+ PT PI
Sbjct: 121 VQKAMKAYSEAQEIAEKDPKLPPTDPI 147
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 179 bits (436), Expect = 2e-45
Identities = 92/175 (52%), Positives = 120/175 (68%), Gaps = 3/175 (1%)
Frame = +2
Query: 140 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGA 319
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSVAYKNVVGA
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGA 62
Query: 320 RRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS---N 490
RRSSWRVISS+EQK E + K+YR + EL C +VL +L+ +L+ N
Sbjct: 63 RRSSWRVISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDIN 120
Query: 491 PESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPI 655
E+KVFYLKM+GDY+RYL EVA G++R +E S++AY+DA ++ P+HPI
Sbjct: 121 TEAKVFYLKMRGDYHRYLVEVAEGDSRKENIEKSREAYKDA-SAKAEELSPSHPI 174
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 165 bits (401), Expect = 3e-41
Identities = 81/138 (58%), Positives = 107/138 (77%)
Frame = +2
Query: 152 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 331
M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV+YKN+VG RRSS
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSS 139
Query: 332 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 511
WRVISSIE+KT S + K+Y+ +EKEL+++C +VLG+L++ LIP A + E+KVFY
Sbjct: 140 WRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFY 197
Query: 512 LKMKGDYYRYLAEVATGE 565
K+KGDYYRYLAE + G+
Sbjct: 198 FKLKGDYYRYLAEFSHGQ 215
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 147 bits (356), Expect = 8e-36
Identities = 75/123 (60%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Frame = +2
Query: 161 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 340
DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSVAYKNV+GARR+SWR+
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRI 62
Query: 341 ISSIEQKTE--GSE-RKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 511
I+SIEQK E G + K +M + YR +E+EL+ IC ++L LLD LI + + ESKVFY
Sbjct: 63 ITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFY 122
Query: 512 LKM 520
K+
Sbjct: 123 NKI 125
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 83.0 bits (196), Expect = 2e-16
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +2
Query: 152 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 331
M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV YKNVVG++R +
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFA 245
Query: 332 WRVISSIEQKTEGSERKQQMAK--EYRVKVEKELREICYDVL 451
WR + ++ R Q+ +Y+ K+E EL+ +C ++L
Sbjct: 246 WRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +2
Query: 164 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 343
KE+ AK ++ ER + A K+ E + EE++ L K R+ +
Sbjct: 339 KEKERLEAKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEIN 398
Query: 344 SSIEQKTEGSERKQQMAKEYRVKVEK 421
+ IE+K + E+K+Q +E K E+
Sbjct: 399 AKIEEKKKREEKKKQEEEEKMKKKEQ 424
>SB_26137| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.27)
Length = 271
Score = 31.5 bits (68), Expect = 0.62
Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 1/135 (0%)
Frame = +2
Query: 17 PRSRQNQYIVQRKRKTDIVLKFAGSNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQR-AKL 193
PR+R + Y+V V+ + + +Q +S M +KE ++ A+
Sbjct: 25 PRARDDSYLVPSDAPKKRVILYLVNGVKLALQQPGNQVSRNGREGMGTEKEAQTEKEAQT 84
Query: 194 AEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGS 373
++AER + + TE + E + + + R I + +K +
Sbjct: 85 EKEAEREKEAETEKEAQTEKEAQTEKEAEREKEAETEKEAEREKEAEREIEAETEKEAET 144
Query: 374 ERKQQMAKEYRVKVE 418
E++ Q KE + + E
Sbjct: 145 EKEAQTEKEAQTEKE 159
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 128 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 280
+SPLPS+ +E+V KLAE+ E ++++ T+ E + EE+
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693
>SB_10602| Best HMM Match : RVT_1 (HMM E-Value=1.3e-10)
Length = 416
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 446 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 625
+LGL++ H+ PK+ + ++F +Y+ +L V T+ +E + Y + S
Sbjct: 116 ILGLIESHIDPKSFH--HRMFLAACCLEYFGFLRSVEFTVTQEKCIEQNMPLYAVFIDFS 173
Query: 626 KA 631
KA
Sbjct: 174 KA 175
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Frame = +2
Query: 149 TMSVDKEELVQRAKLAEQAERY---DDMAAAMKEVTETGVELSNE-ERNLLSVAYKNVVG 316
++S+ +EL + LA Q + D A K+VT ++ + E R + +
Sbjct: 3123 SLSLKSQELEAKNALANQKLKQMVKDQQEAEKKKVTSMEIQTTIETHRKQTIIEMVSCAA 3182
Query: 317 ARRSSWR--------VISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHL 472
R S++ + SS++++T+ + KQQ + +VE + E V G+ +HL
Sbjct: 3183 CLRKSYQESAFLDLLITSSLQKQTKQIKEKQQAVMKDLAQVEPAVDEARQAVKGIKKQHL 3242
Query: 473 I 475
+
Sbjct: 3243 V 3243
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/100 (22%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = +2
Query: 140 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLL-SVAYKNVVG 316
PSS S DK+E+ +++ +++++ ++A K + E ++S + S+ K +
Sbjct: 1066 PSSRSSHDKDEISEKSNPSDKSD--VEVARKNKHMPEALYKISETISGMNDSITLKEPLK 1123
Query: 317 ARRSSWR--VISSIEQKTEGSERKQQMAKEYRVKVEKELR 430
A+ R ++ + E +R+ + K++R++ EK+ R
Sbjct: 1124 AKDGDGRNKEEQELKDRMENEKREDTIRKQHRLQWEKKAR 1163
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR------R 325
++ L + K A +R +A+A+ + + + LS K VV + +
Sbjct: 279 QKTLSEMFKQAVTEDRPKMLASAITKALNQDIHSPSALNLPLSTPAKQVVKTKWDRIREK 338
Query: 326 SSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 490
W ++S E+ +ER++Q E +VK E++ R+ ++ + HL K SN
Sbjct: 339 HQWNLLSEDEKNKIKAERRKQKRLELKVKREEKERKRLEELKRVSFAHLGMKLSN 393
>SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 512
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 182 RAKLAEQAERYDDMAAAM-KEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQ 358
+ K+ +++E+YD + + KE T+ G + E + N AR + ++ +
Sbjct: 13 KRKIFKKSEKYDRLEEPLEKEGTDGGEIEAEAEVEPHTEEEANYNEARSENCEKNNNNDS 72
Query: 359 KTEGSERKQQMAKEYRVKVEKELRE 433
T ++ +Q KE+ V +EK+L++
Sbjct: 73 STPDAKSQQADIKEWIVSLEKQLKD 97
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 335 RVISSIEQKTEGSERKQQMAKEYRVKVEKELREIC 439
R++ IE+K E E ++ AKE + + E+E + IC
Sbjct: 919 RIMKEIEEK-EKKEEAERKAKEEKEREERERKRIC 952
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 380 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 481
K++M ++Y K+EKE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
>SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 27.9 bits (59), Expect = 7.7
Identities = 26/99 (26%), Positives = 47/99 (47%)
Frame = +2
Query: 137 LPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG 316
L S+ +D+E R +++++ RY + A MK V E + ++E + +
Sbjct: 539 LDSNLSKLDQEVRGLREEISQEESRYHYLHAMMK-VLEIQQKRIDDEMKAYTAQDQ---A 594
Query: 317 ARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELRE 433
R+ SWR EQ T + ++ + K R K +K +RE
Sbjct: 595 DRKKSWR-----EQYTRKIQEQENLGKSLREK-QKAVRE 627
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,950,404
Number of Sequences: 59808
Number of extensions: 417119
Number of successful extensions: 1241
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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