Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10i09f
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.2  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.1  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   9.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.1  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 192 VPVPHDIPQAPGKPEENATAVQPTKQNTT 278
           VP P   P    + E    + QPT+ +TT
Sbjct: 396 VPTPEPQPTQTTESEPTQASEQPTESSTT 424


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +3

Query: 195 PVPHDIPQAPGKPEENATAVQPTKQNTTS 281
           PVP  + +   KP        P++  TT+
Sbjct: 392 PVPQPVEEVTQKPSSTKAPAPPSRDLTTT 420


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin
          deacetylase 2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 43 ANKSHLFNCLFLLKISF 93
          ANK++   CL LL I+F
Sbjct: 2  ANKTYWLCCLLLLGIAF 18


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin
          deacetylase 2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 43 ANKSHLFNCLFLLKISF 93
          ANK++   CL LL I+F
Sbjct: 2  ANKTYWLCCLLLLGIAF 18


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 142 CA*HCRLNSLEPNWELQYPFLMISLKLQVNLKKTQQQFSLRNKTQLL 282
           C+ +CR+  +    ++  P  +  L+   N  K    FSLR    LL
Sbjct: 278 CSEYCRVFKMLQEEDIFTPDRIPQLEEMSNFLKRHTGFSLRPAAGLL 324


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 172 PDCSAGNA 149
           PDCS GNA
Sbjct: 95  PDCSKGNA 102


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 69  FILVEN*LYFKMKILAFVCLLKLAMCI 149
           FI+    L F + I  F C L + +CI
Sbjct: 272 FIIFTMHLLFLLCIYYFYCALIILLCI 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,327
Number of Sequences: 336
Number of extensions: 1632
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)