Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10i09f
(536 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M35093-1|AAB59612.1| 307|Homo sapiens tumor mucin antigen protein. 33 0.64
M31823-1|AAA35757.1| 169|Homo sapiens protein ( Human breast ca... 33 0.64
M61170-1|AAB53150.1| 475|Homo sapiens polymorphic epithelial mu... 32 1.5
J05582-1|AAA60019.1| 1255|Homo sapiens mucin protein. 32 1.5
J05581-1|AAA59876.1| 475|Homo sapiens polymorphic epithelial mu... 32 1.5
AL713999-10|CAI95078.1| 475|Homo sapiens mucin 1, cell surface ... 32 1.5
Y18563-1|CAB96131.1| 629|Homo sapiens Nuraminidase protein. 31 2.0
X52229-1|CAA36478.1| 515|Homo sapiens precursor polypeptide (AA... 31 2.6
X52228-1|CAA36477.1| 347|Homo sapiens precursor polypeptide (AA... 31 2.6
BX537611-1|CAD97798.1| 657|Homo sapiens hypothetical protein pr... 29 7.9
AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein. 29 7.9
AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein. 29 7.9
AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens ... 29 7.9
>M35093-1|AAB59612.1| 307|Homo sapiens tumor mucin antigen protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.64
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 338
LG+T P HD+ AP KP +TA P Q TSA P A VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAQGVTSAPETRPPPGSTAPPAHGVT 159
>M31823-1|AAA35757.1| 169|Homo sapiens protein ( Human breast
carcinoma-associated antigen DF3 mRNA, 5' end. ).
Length = 169
Score = 33.1 bits (72), Expect = 0.64
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 338
LG+T P HD+ AP KP +TA P TSA P+A VT
Sbjct: 117 LGSTTPPAHDVTSAPDNKPAPGSTA--PQAHGVTSAPDTRPAPGSTAPQAHGVT 168
>M61170-1|AAB53150.1| 475|Homo sapiens polymorphic epithelial mucin
protein.
Length = 475
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 338
LG+T P HD+ AP KP +TA P TSA P A VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPAPGSTAPPAHGVT 159
>J05582-1|AAA60019.1| 1255|Homo sapiens mucin protein.
Length = 1255
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 338
LG+T P HD+ AP KP +TA P TSA P A VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPAPGSTAPPAHGVT 159
>J05581-1|AAA59876.1| 475|Homo sapiens polymorphic epithelial mucin
protein.
Length = 475
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 338
LG+T P HD+ AP KP +TA P TSA P A VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPAPGSTAPPAHGVT 159
>AL713999-10|CAI95078.1| 475|Homo sapiens mucin 1, cell surface
associated protein.
Length = 475
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 338
LG+T P HD+ AP KP +TA P TSA P A VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPAPGSTAPPAHGVT 159
>Y18563-1|CAB96131.1| 629|Homo sapiens Nuraminidase protein.
Length = 629
Score = 31.5 bits (68), Expect = 2.0
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 102 MKILAFVCL-LKLAMCIALPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTK 266
+++L C L + +C++LP+ +GA G P D+P P E A++ PT+
Sbjct: 137 LRVLRLSCFSLSILLCLSLPSLGAGASSGLRRMRPADLPPRP-MEESPASSSAPTE 191
>X52229-1|CAA36478.1| 515|Homo sapiens precursor polypeptide (AA
-21 to 494) protein.
Length = 515
Score = 31.1 bits (67), Expect = 2.6
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 338
LG+T P HD+ AP KP +TA P TSA P A VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPPPGSTAPPAHGVT 159
>X52228-1|CAA36477.1| 347|Homo sapiens precursor polypeptide (AA
-21 to 326) protein.
Length = 347
Score = 31.1 bits (67), Expect = 2.6
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 338
LG+T P HD+ AP KP +TA P TSA P A VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPPPGSTAPPAHGVT 159
>BX537611-1|CAD97798.1| 657|Homo sapiens hypothetical protein
protein.
Length = 657
Score = 29.5 bits (63), Expect = 7.9
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = +3
Query: 156 PAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKV 335
P + T P P +P+ P K ++T QP +Q++ E +K+
Sbjct: 257 PGAEQDVPTEVTEPPPQIVPEVPQKTTASSTKAQPLEQDSAVDNALLLTQSKRFSEPQKL 316
Query: 336 T 338
T
Sbjct: 317 T 317
>AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein.
Length = 1247
Score = 29.5 bits (63), Expect = 7.9
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = +3
Query: 156 PAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKV 335
P + T P P +P+ P K ++T QP +Q++ E +K+
Sbjct: 847 PGAEQDVPTEVTEPPPQIVPEVPQKTTASSTKAQPLEQDSAVDNALLLTQSKRFSEPQKL 906
Query: 336 T 338
T
Sbjct: 907 T 907
>AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein.
Length = 1247
Score = 29.5 bits (63), Expect = 7.9
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = +3
Query: 156 PAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKV 335
P + T P P +P+ P K ++T QP +Q++ E +K+
Sbjct: 847 PGAEQDVPTEVTEPPPQIVPEVPQKTTASSTKAQPLEQDSAVDNALLLTQSKRFSEPQKL 906
Query: 336 T 338
T
Sbjct: 907 T 907
>AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens
cDNA FLJ14341 fis, clone THYRO1000343, weakly similar to
ATROPHIN-1. ).
Length = 1064
Score = 29.5 bits (63), Expect = 7.9
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = +3
Query: 156 PAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKV 335
P + T P P +P+ P K ++T QP +Q++ E +K+
Sbjct: 664 PGAEQDVPTEVTEPPPQIVPEVPQKTTASSTKAQPLEQDSAVDNALLLTQSKRFSEPQKL 723
Query: 336 T 338
T
Sbjct: 724 T 724
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,983,952
Number of Sequences: 237096
Number of extensions: 994957
Number of successful extensions: 2545
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2544
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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