Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10i07r
         (773 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003526-1|AAO39530.1|  190|Drosophila melanogaster RE19605p pro...   161   7e-40
BT001575-1|AAN71330.1|  190|Drosophila melanogaster RE23139p pro...   161   7e-40
AY051983-1|AAK93407.1|  190|Drosophila melanogaster LD45324p pro...   161   7e-40
AE014297-2444|AAO41575.1|  190|Drosophila melanogaster CG7217-PB...   161   7e-40
AE014297-2443|AAF55497.2|  190|Drosophila melanogaster CG7217-PA...   161   7e-40
BT022231-1|AAY54647.1|  133|Drosophila melanogaster IP12465p pro...    40   0.005
AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch dep...    30   4.1  
AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA p...    30   4.1  

>BT003526-1|AAO39530.1|  190|Drosophila melanogaster RE19605p
           protein.
          Length = 190

 Score =  161 bits (392), Expect = 7e-40
 Identities = 75/109 (68%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
 Frame = -3

Query: 771 THLPGYVQNADKLKS-DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKAL 595
           THLPGYV +AD+LKS  GV EIVCVSVNDP+VM+AWG +H   GKVR+LADP+G F KAL
Sbjct: 82  THLPGYVSSADELKSKQGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKAL 141

Query: 594 DLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 448
           D+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I  K
Sbjct: 142 DVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190


>BT001575-1|AAN71330.1|  190|Drosophila melanogaster RE23139p
           protein.
          Length = 190

 Score =  161 bits (392), Expect = 7e-40
 Identities = 75/109 (68%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
 Frame = -3

Query: 771 THLPGYVQNADKLKS-DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKAL 595
           THLPGYV +AD+LKS  GV EIVCVSVNDP+VM+AWG +H   GKVR+LADP+G F KAL
Sbjct: 82  THLPGYVSSADELKSKQGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKAL 141

Query: 594 DLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 448
           D+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I  K
Sbjct: 142 DVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190


>AY051983-1|AAK93407.1|  190|Drosophila melanogaster LD45324p
           protein.
          Length = 190

 Score =  161 bits (392), Expect = 7e-40
 Identities = 75/109 (68%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
 Frame = -3

Query: 771 THLPGYVQNADKLKS-DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKAL 595
           THLPGYV +AD+LKS  GV EIVCVSVNDP+VM+AWG +H   GKVR+LADP+G F KAL
Sbjct: 82  THLPGYVSSADELKSKQGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKAL 141

Query: 594 DLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 448
           D+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I  K
Sbjct: 142 DVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190


>AE014297-2444|AAO41575.1|  190|Drosophila melanogaster CG7217-PB,
           isoform B protein.
          Length = 190

 Score =  161 bits (392), Expect = 7e-40
 Identities = 75/109 (68%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
 Frame = -3

Query: 771 THLPGYVQNADKLKS-DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKAL 595
           THLPGYV +AD+LKS  GV EIVCVSVNDP+VM+AWG +H   GKVR+LADP+G F KAL
Sbjct: 82  THLPGYVSSADELKSKQGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKAL 141

Query: 594 DLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 448
           D+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I  K
Sbjct: 142 DVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190


>AE014297-2443|AAF55497.2|  190|Drosophila melanogaster CG7217-PA,
           isoform A protein.
          Length = 190

 Score =  161 bits (392), Expect = 7e-40
 Identities = 75/109 (68%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
 Frame = -3

Query: 771 THLPGYVQNADKLKS-DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKAL 595
           THLPGYV +AD+LKS  GV EIVCVSVNDP+VM+AWG +H   GKVR+LADP+G F KAL
Sbjct: 82  THLPGYVSSADELKSKQGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKAL 141

Query: 594 DLGTNLPPLGGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 448
           D+  +LPPLGG RSKR+S+V+ + KV +LNVEPDGTGLSCSLA+ I  K
Sbjct: 142 DVTIDLPPLGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190


>BT022231-1|AAY54647.1|  133|Drosophila melanogaster IP12465p
           protein.
          Length = 133

 Score = 39.5 bits (88), Expect = 0.005
 Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +2

Query: 656 C*APQAAITYGSLTDTHTISATPS-DFSLSAFCT 754
           C  PQA IT GSLT+T TIS+TP  DFS SA  T
Sbjct: 100 CSLPQADITKGSLTETQTISSTPCLDFSSSAELT 133


>AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch
           depedent uracil/thymineDNA glycosylase protein.
          Length = 1738

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +1

Query: 550 FGAETSERRQ-IGAQVQSLDEVAAGIG*HTHLSFSVVLSSPSRHHI-RVINRHAH 708
           FGA  SE  Q +  Q Q L  +   +  H HL  S  +S  ++HH+ + I++H H
Sbjct: 447 FGAHQSEHHQRLNQQQQPLQHL---LDCHGHLEQSTPISQQNQHHLSQQIHQHQH 498


>AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA
           protein.
          Length = 1738

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +1

Query: 550 FGAETSERRQ-IGAQVQSLDEVAAGIG*HTHLSFSVVLSSPSRHHI-RVINRHAH 708
           FGA  SE  Q +  Q Q L  +   +  H HL  S  +S  ++HH+ + I++H H
Sbjct: 447 FGAHQSEHHQRLNQQQQPLQHL---LDCHGHLEQSTPISQQNQHHLSQQIHQHQH 498


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,264,991
Number of Sequences: 53049
Number of extensions: 712390
Number of successful extensions: 1649
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1644
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)