Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10i07f
(621 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong s... 136 1e-32
At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong s... 134 4e-32
At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong s... 134 6e-32
At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar ... 122 1e-28
At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol sp... 108 3e-24
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 99 1e-21
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 45 4e-05
At5g46250.2 68418.m05694 RNA recognition motif (RRM)-containing ... 34 0.087
At5g46250.1 68418.m05693 RNA recognition motif (RRM)-containing ... 34 0.087
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 33 0.15
At3g02890.1 68416.m00284 PHD finger protein-related contains low... 31 0.81
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 29 1.9
At5g07360.1 68418.m00840 amidase family protein low similarity t... 29 3.3
At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearl... 29 3.3
>At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 136 bits (328), Expect = 1e-32
Identities = 69/148 (46%), Positives = 93/148 (62%), Gaps = 4/148 (2%)
Frame = +1
Query: 172 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 342
MAPI VGD +P + E+ ++ L AGKKV+LF VPGAFTP CS H+PG++
Sbjct: 1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFI 60
Query: 343 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPP 522
+ A++LKS GV EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 EKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 523 LG-GFRSKRFSMVIVDSKVQDLNVEPDG 603
G G RS+RF++++ D KV NVE G
Sbjct: 121 KGLGVRSRRFALLLDDLKVTVANVESGG 148
>At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 134 bits (324), Expect = 4e-32
Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 4/148 (2%)
Frame = +1
Query: 172 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 342
MAPI VGD +P + E+ V++ + AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 343 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPP 522
A++LKS G+ EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 523 LG-GFRSKRFSMVIVDSKVQDLNVEPDG 603
G G RS+RF++++ + KV NVE G
Sbjct: 121 KGLGIRSRRFALLLDNLKVTVANVENGG 148
>At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 134 bits (323), Expect = 6e-32
Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 4/148 (2%)
Frame = +1
Query: 172 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 342
MAPI VGD +P + E+ V++ + AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 343 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPP 522
A++LKS G+ EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 523 LG-GFRSKRFSMVIVDSKVQDLNVEPDG 603
G G RS+RF++++ + KV NVE G
Sbjct: 121 KGLGIRSRRFALLLDNLKVTVANVESGG 148
>At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar to
type 2 peroxiredoxin [Brassica rapa subsp. pekinensis]
GI:4928472; contains Pfam profile: PF00578 AhpC/TSA
(alkyl hydroperoxide reductase and thiol-specific
antioxidant) family
Length = 234
Score = 122 bits (295), Expect = 1e-28
Identities = 70/167 (41%), Positives = 99/167 (59%), Gaps = 8/167 (4%)
Frame = +1
Query: 127 TNRASARALHISQLSM-APIKVGDQLPAADLFEDSPAN----KVNICELTAGKKVVLFAV 291
TN ASA + + A I VGD+LP + L P+ V + LTAGKK +LFAV
Sbjct: 54 TNSASATTRSFATTPVTASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAV 113
Query: 292 PGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLAD 471
PGAFTP CS+ H+PG+V A +L+S G+ I C+SVND +VM AW +V +L+D
Sbjct: 114 PGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSD 173
Query: 472 PSGNFIKALDLGTNL--PPLG-GFRSKRFSMVIVDSKVQDLNVEPDG 603
+G F L + +L P+G G RS+R++++ D V+ LN+E G
Sbjct: 174 GNGEFTGKLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGG 220
>At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein
similar to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profiles PF00646:
F-box domain, PF00578: AhpC/TSA family
Length = 553
Score = 108 bits (259), Expect = 3e-24
Identities = 61/154 (39%), Positives = 94/154 (61%), Gaps = 4/154 (2%)
Frame = +1
Query: 172 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 342
MAPI VGD +P + +D V++ L AGKKV+LF VPGAF P CS H+ G++
Sbjct: 1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFI 60
Query: 343 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPP 522
+ A++LKS+GV EI+C+S +DP+++ A + V+ + D SG +I+ L L +
Sbjct: 61 EKAEELKSNGVDEIICLSGDDPFMITACSENKH----VKFVEDGSGEYIQLLGLELEVKD 116
Query: 523 LG-GFRSKRFSMVIVDSKVQDLNVEPDGTGLSCS 621
G G RS+ F++++ + KV +NV G+G CS
Sbjct: 117 KGLGVRSRGFALLLDNLKVIVVNV---GSGGDCS 147
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 99 bits (238), Expect = 1e-21
Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Frame = +1
Query: 247 ICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAW 426
+ ++ GKKVV+F +PGA+T CS+ H+P Y + DK K+ G+ ++CVSVNDP+ + W
Sbjct: 67 LSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGW 126
Query: 427 GAQHNTKGKVRMLADPSGNFIKALDLGTNL-PPLGGFRSKRFSMVIVDSKVQDLNVE 594
+ K + D G F K+L L +L L G RS+R+S + D KV+ +NVE
Sbjct: 127 AEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAVNVE 183
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 45.2 bits (102), Expect = 4e-05
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Frame = +1
Query: 172 MAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNA 351
M I +GD +P ++ ++ +K + + A VLF+ PG FTP C+ T L + A
Sbjct: 1 MPGITLGDTVPNLEV--ETTHDKFKLHDYFANSWTVLFSHPGDFTPVCT-TELGAMAKYA 57
Query: 352 DKLKSDGVAEIVCVSVNDPYVMAAW-----GAQHNTKGKVRMLADPSGNFIKALDLGTNL 516
+ GV +++ +S +D W H +K ++ADP+ I L++ +
Sbjct: 58 HEFDKRGV-KLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNM---I 113
Query: 517 PPLGGFRSKRFSMVIVDSKVQDLNVEPDGTG 609
P+ S+ +V DSK++ + P TG
Sbjct: 114 DPIENGPSRALHIVGPDSKIKLSFLYPSTTG 144
>At5g46250.2 68418.m05694 RNA recognition motif (RRM)-containing
protein contains similarity to RNA-binding protein;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 420
Score = 33.9 bits (74), Expect = 0.087
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 414 DGGLGSSAQH*RKGAYASRSQRQLHQGSGPGHQSAAARRFPLQKVLDGHR*QQGPRSECG 593
DGG ++ KG + +RQ HQG G GH +A++ P ++ + GPR G
Sbjct: 338 DGGNHQKDKNGNKGRVVGQGRRQNHQG-GNGHGTASSSSHPNYHPVEVSKRPPGPRMPDG 396
Query: 594 AR 599
R
Sbjct: 397 TR 398
>At5g46250.1 68418.m05693 RNA recognition motif (RRM)-containing
protein contains similarity to RNA-binding protein;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 422
Score = 33.9 bits (74), Expect = 0.087
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 414 DGGLGSSAQH*RKGAYASRSQRQLHQ-GSGPGHQSAAARRFPLQKVLDGHR*QQGPRSEC 590
DGG ++ KG + +RQ HQ G+G GH +A++ P ++ + GPR
Sbjct: 338 DGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSKRPPGPRMPD 397
Query: 591 GAR 599
G R
Sbjct: 398 GTR 400
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 33.1 bits (72), Expect = 0.15
Identities = 31/109 (28%), Positives = 53/109 (48%)
Frame = +1
Query: 166 LSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQ 345
L A + G P L +D V++ + GK VVL+ P TPGC+K +
Sbjct: 64 LIFAKVNKGQAAPDFTL-KDQNGKPVSLKKYK-GKPVVLYFYPADETPGCTK-QACAFRD 120
Query: 346 NADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIK 492
+ +K K G AE++ +S +D A+ +++ K +L+D GN ++
Sbjct: 121 SYEKFKKAG-AEVIGISGDDSASHKAFASKY--KLPYTLLSD-EGNKVR 165
>At3g02890.1 68416.m00284 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 963
Score = 30.7 bits (66), Expect = 0.81
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = -2
Query: 497 RALMKLPLGSASIRTFPLVLC*APQAAITYGSLTDTHTISATPSDFSLSAFCTYPGKCVL 318
R +++ G+ ++ + P C A + GS +D S S L++ C++ G +L
Sbjct: 4 RGRLEIQSGTCNVCSAPCSSCMHHNAEFS-GSKSDES--SDENSHGVLASQCSFNGDNLL 60
Query: 317 EHPGVKAPGTANNTT 273
GV APG+++NT+
Sbjct: 61 RSSGVNAPGSSHNTS 75
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 388 CVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNL-PPLGGFRSKRFSMVIV 564
C + +V ++W NT+ + +L + I DL TNL P L + R +
Sbjct: 1636 CSQATEDFVGSSWDELKNTRQALVLLVTEQKSTITYDDLTTNLCPALSTQQLYRICTLCK 1695
Query: 565 DSKVQDLNVEPD 600
+D NV PD
Sbjct: 1696 IDDHEDQNVSPD 1707
>At5g07360.1 68418.m00840 amidase family protein low similarity to
enantiomerase-selective amidase [Rhodococcus sp.]
GI:152052; contains Pfam profile PF01425: Amidase
Length = 659
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -2
Query: 524 SGGRLVPRSRALMKLPLGS--ASIRTFPLVLC*APQAAITYGSLTDTHTISATPSDFSLS 351
S G S ++ +GS A T+P C T+GS+ T +S + S L
Sbjct: 349 SAGPAASTSAGMVPFAIGSETAGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLG 408
Query: 350 AFCTYPGKCVLEHPGVK 300
FC C + +K
Sbjct: 409 PFCRTAADCAVILDAIK 425
>At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearly
identical to acyl-activating enzyme 18 [Arabidopsis
thaliana] GI:29893268; similar to acetyl-CoA synthetase
[SP|P27095] from Methanothrix soehngenii; contains Pfam
AMP-binding enzyme domain PF00501l; identical to cDNA
acyl-activating enzyme 18 (At1g55320) GI: 29893267
Length = 725
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 217 FEDSPANKVNICELTAGKKVVLFAVPGAFTPG 312
F+DSP N++ I EL +V A+ G+F G
Sbjct: 199 FDDSPVNRMTIKELREQVMLVANAISGSFEKG 230
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,905,733
Number of Sequences: 28952
Number of extensions: 310807
Number of successful extensions: 862
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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