Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10i02f
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.7  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 459 QFLNEFTRLVHLQHYVTTTNKFTIDKDLRY 370
           + +    RL+H +  +T    FTID  L +
Sbjct: 278 EVIGNILRLMHRRFEITALRLFTIDNKLLF 307


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 347 KIIRIGLQYLKSLSMVNLLV 406
           K I I +QY KSL++  +++
Sbjct: 341 KSIAIKVQYAKSLNLAGVMI 360


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -2

Query: 345 YTLSKIFITQHIMALVRNCMHPHNLHNSITE 253
           Y+ +K+F+ +HI+      +     +N+  E
Sbjct: 156 YSWAKVFLVEHILVQTNKLVLALECNNTTAE 186


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -2

Query: 345 YTLSKIFITQHIMALVRNCMHPHNLHNSITE 253
           Y+ +K+F+ +HI+      +     +N+  E
Sbjct: 156 YSWAKVFLVEHILVQTNKLVLALECNNTTAE 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,279
Number of Sequences: 336
Number of extensions: 2217
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)