Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10i01f
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    64   5e-13
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    59   2e-11
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   2.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   4.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   4.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   4.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   4.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   4.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 64.5 bits (150), Expect = 5e-13
 Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 15/182 (8%)
 Frame = +3

Query: 3   DKLYFDGVKITDVKVDK-------LTTFFENFEFDASNSVYFSKEEIXNNHVHDVKVRQP 161
           ++L + G+ +++++V           TF++  + D S  + F            V VR  
Sbjct: 423 NQLNYPGITVSNIEVQSQGSSKNTFNTFWQQSDVDLSRGMDFQPRG-------SVFVRFT 475

Query: 162 RLNHSPFNVNIEVD--SNVASDAVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLT 335
            L H PF   I V+  SN       +IFLAPK D+ G P    D  + F ELD FT  L 
Sbjct: 476 HLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMFIELDKFTVNLK 535

Query: 336 AGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMSE--EF----CYMPKRLMLPR 497
            GQN I R S++  +    ++P     + LD  + P    E  +F    C  P+ +++P+
Sbjct: 536 QGQNTITRASSQSSV----TIPFERTFRNLDLNR-PQGGEELAQFNFCGCGWPQHMLIPK 590

Query: 498 GT 503
           GT
Sbjct: 591 GT 592


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 59.3 bits (137), Expect = 2e-11
 Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
 Frame = +3

Query: 6   KLYFDGVKITDVKVDK-------LTTFFENFEFDASNSVYFSKEEIXNNHVHDVKVRQPR 164
           +L + GV +T+++V         L+TF++  + D S  + F            V VR   
Sbjct: 424 QLNYPGVTVTNIEVQAKGGKPNVLSTFWQQSDLDLSRGLDFQPRG-------SVFVRFTH 476

Query: 165 LNHSPFNVNIEVDSNVASD-AVVKIFLAPKYDDNGIPLTLEDNWMKFFELDWFTTKLTAG 341
           L +  F   I V+++  +     +IFLAP++D+ G P    +    F ELD F   L  G
Sbjct: 477 LQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDMFIELDRFAVSLKQG 536

Query: 342 QNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGK-VPFDMSEEF----CYMPKRLMLPRGT 503
            N I R+S E  +    ++P     + LD  +    D   EF    C  P+ ++LP+GT
Sbjct: 537 TNTITRHSTESSL----TIPFERTFRNLDANRPTGGDALSEFNFCGCGWPQHMLLPKGT 591


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 334 VSLVVNQSNSKNFIQLSSNVRGIPLSSYL 248
           VSL++N  N +   ++   VR + ++SYL
Sbjct: 119 VSLIINYENQRTRSRIHLFVRYVFVTSYL 147


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 147 KVRQPRLNHSPFNVNIE 197
           K   P LNH P N+ I+
Sbjct: 255 KQELPDLNHKPLNLTIK 271


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 147 KVRQPRLNHSPFNVNIE 197
           K   P LNH P N+ I+
Sbjct: 147 KQELPDLNHKPLNLTIK 163


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 348 KIIRNSNEFVIFKEDSVPM 404
           K I N N+FV   +D+VP+
Sbjct: 275 KHIENFNDFVTALKDNVPV 293


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 348 KIIRNSNEFVIFKEDSVPM 404
           K I N N+FV   +D+VP+
Sbjct: 275 KHIENFNDFVTALKDNVPV 293


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 348 KIIRNSNEFVIFKEDSVPM 404
           K I N N+FV   +D+VP+
Sbjct: 595 KHIENFNDFVTALKDNVPV 613


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,039
Number of Sequences: 336
Number of extensions: 2157
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)