Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h21f
         (632 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P43868 Cluster: Ferrochelatase; n=40; Bacteria|Rep: Fer...    34   2.5  
UniRef50_Q9KL53 Cluster: Chemotactic transducer-related protein;...    33   4.3  
UniRef50_A1IB68 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  

>UniRef50_P43868 Cluster: Ferrochelatase; n=40; Bacteria|Rep:
           Ferrochelatase - Haemophilus influenzae
          Length = 323

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 385 GWEVDCLWTLVENDELQSVRLYNNGQQFFIYRPEIN 492
           G+ VDCL T+ E DE       NNG Q + Y P +N
Sbjct: 270 GFSVDCLETIEEIDEENRENFLNNGGQSYQYIPALN 305


>UniRef50_Q9KL53 Cluster: Chemotactic transducer-related protein;
           n=18; Vibrio|Rep: Chemotactic transducer-related protein
           - Vibrio cholerae
          Length = 981

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +1

Query: 262 SHYIIRTMMIVFKKVVVILLFSIEFSCSS-MIDLTQKWIPNAGWEVDCLWTLVENDELQS 438
           +H   + +  VF + V  +L S++F  +S  I+ T+  + +  W    L    ++  L S
Sbjct: 66  AHENSKKLETVFTQNVAPILTSLDFLATSRFIEHTEPPLQDQRWLTSVLRAFEQSSNLNS 125

Query: 439 VRLYNNGQQFFIYRP 483
           +   N   QFF++RP
Sbjct: 126 LYFANETGQFFMFRP 140


>UniRef50_A1IB68 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
           uncharacterized protein - Candidatus Desulfococcus
           oleovorans Hxd3
          Length = 333

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -3

Query: 102 VCCLTILIFNFFIFYGIKRYSV 37
           +CCLT+ +F FFI+Y + R S+
Sbjct: 288 ICCLTMTVFFFFIYYKLTRKSI 309


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,402,582
Number of Sequences: 1657284
Number of extensions: 11384228
Number of successful extensions: 24426
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24415
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)