Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h21f
(632 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubuli... 32 0.74
AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB... 32 0.74
AY119145-1|AAM51005.1| 327|Drosophila melanogaster RE51929p pro... 29 5.2
AF325711-1|AAG50020.1| 327|Drosophila melanogaster beaten path ... 29 5.2
AE014134-2653|AAF53492.2| 327|Drosophila melanogaster CG7644-PA... 29 5.2
AY122127-1|AAM52639.1| 534|Drosophila melanogaster GH22661p pro... 29 6.9
AY052049-1|AAK93473.1| 1674|Drosophila melanogaster LP07057p pro... 29 6.9
AF325712-1|AAG50021.1| 534|Drosophila melanogaster beaten path ... 29 6.9
AE014296-81|AAN11437.1| 1674|Drosophila melanogaster CG7004-PB, ... 29 6.9
AE014296-80|AAF47375.2| 1674|Drosophila melanogaster CG7004-PA, ... 29 6.9
AE014134-2665|AAF53498.2| 534|Drosophila melanogaster CG4838-PA... 29 6.9
>AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubulin
ring protein protein.
Length = 1092
Score = 31.9 bits (69), Expect = 0.74
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +1
Query: 346 SMIDLTQKWIPNAGWEVDCLWTLVENDELQSVRLYNNGQQFFIYR--PEINGTSKSE--- 510
+M + Q++ PN GW++ L + + +Q +RL ++F R IN ++E
Sbjct: 105 AMDENQQQFNPNPGWQMLELLFRIADRPVQKIRL---NREFMEQRRLSIINSMEEAERQA 161
Query: 511 YYRTRAWDVRCRETSEKGVTGACVVSAELIKPPQDSTS 624
+A + TSE V A ++S + + PP+D +S
Sbjct: 162 QIEEQAKLEAAKNTSETEVDWAALLSEDFLDPPEDDSS 199
>AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB,
isoform B protein.
Length = 1092
Score = 31.9 bits (69), Expect = 0.74
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +1
Query: 346 SMIDLTQKWIPNAGWEVDCLWTLVENDELQSVRLYNNGQQFFIYR--PEINGTSKSE--- 510
+M + Q++ PN GW++ L + + +Q +RL ++F R IN ++E
Sbjct: 105 AMDENQQQFNPNPGWQMLELLFRIADRPVQKIRL---NREFMEQRRLSIINSMEEAERQA 161
Query: 511 YYRTRAWDVRCRETSEKGVTGACVVSAELIKPPQDSTS 624
+A + TSE V A ++S + + PP+D +S
Sbjct: 162 QIEEQAKLEAAKNTSETEVDWAALLSEDFLDPPEDDSS 199
>AY119145-1|AAM51005.1| 327|Drosophila melanogaster RE51929p
protein.
Length = 327
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 415 VENDELQSVRLYNNGQQFFIYRPEINGTSKSEYYRTRAWDVRCRETSEKGV 567
+END L +V+ Y ++F+ Y P+ N K + +T DV +++ V
Sbjct: 54 IENDTLYTVKWYRGRREFYRYTPKENPAWKI-FTKTNEIDVETAQSNASHV 103
>AF325711-1|AAG50020.1| 327|Drosophila melanogaster beaten path Ib
protein.
Length = 327
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 415 VENDELQSVRLYNNGQQFFIYRPEINGTSKSEYYRTRAWDVRCRETSEKGV 567
+END L +V+ Y ++F+ Y P+ N K + +T DV +++ V
Sbjct: 54 IENDTLYTVKWYRGRREFYRYTPKENPAWKI-FTKTNEIDVETAQSNASHV 103
>AE014134-2653|AAF53492.2| 327|Drosophila melanogaster CG7644-PA
protein.
Length = 327
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 415 VENDELQSVRLYNNGQQFFIYRPEINGTSKSEYYRTRAWDVRCRETSEKGV 567
+END L +V+ Y ++F+ Y P+ N K + +T DV +++ V
Sbjct: 54 IENDTLYTVKWYRGRREFYRYTPKENPAWKI-FTKTNEIDVETAQSNASHV 103
>AY122127-1|AAM52639.1| 534|Drosophila melanogaster GH22661p
protein.
Length = 534
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 415 VENDELQSVRLYNNGQQFFIYRPEINGTSK 504
+END L SV+ Y ++F+ Y P+ N K
Sbjct: 82 MENDTLYSVKWYKGKREFYRYTPKENPAMK 111
>AY052049-1|AAK93473.1| 1674|Drosophila melanogaster LP07057p
protein.
Length = 1674
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 422 TTNYSRYASTIMGSNSLFTGQR*TAHQKVNTTGLGRGTSGVVRPPKKV 565
T +SRY+ + + +F + H + N + G G V PPK++
Sbjct: 276 TPKHSRYSKPRLSLSRVFNHSMPSVHGRPNLSLAPAGVPGSVNPPKRI 323
>AF325712-1|AAG50021.1| 534|Drosophila melanogaster beaten path Ic
protein.
Length = 534
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 415 VENDELQSVRLYNNGQQFFIYRPEINGTSK 504
+END L SV+ Y ++F+ Y P+ N K
Sbjct: 82 MENDTLYSVKWYKGKREFYRYTPKENPAMK 111
>AE014296-81|AAN11437.1| 1674|Drosophila melanogaster CG7004-PB,
isoform B protein.
Length = 1674
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 422 TTNYSRYASTIMGSNSLFTGQR*TAHQKVNTTGLGRGTSGVVRPPKKV 565
T +SRY+ + + +F + H + N + G G V PPK++
Sbjct: 276 TPKHSRYSKPRLSLSRVFNHSMPSVHGRPNLSLAPAGVPGSVNPPKRI 323
>AE014296-80|AAF47375.2| 1674|Drosophila melanogaster CG7004-PA,
isoform A protein.
Length = 1674
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 422 TTNYSRYASTIMGSNSLFTGQR*TAHQKVNTTGLGRGTSGVVRPPKKV 565
T +SRY+ + + +F + H + N + G G V PPK++
Sbjct: 276 TPKHSRYSKPRLSLSRVFNHSMPSVHGRPNLSLAPAGVPGSVNPPKRI 323
>AE014134-2665|AAF53498.2| 534|Drosophila melanogaster CG4838-PA
protein.
Length = 534
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 415 VENDELQSVRLYNNGQQFFIYRPEINGTSK 504
+END L SV+ Y ++F+ Y P+ N K
Sbjct: 82 MENDTLYSVKWYKGKREFYRYTPKENPAMK 111
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,369,889
Number of Sequences: 53049
Number of extensions: 524838
Number of successful extensions: 1061
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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