Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h20r
         (355 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q32Q38 Cluster: LOC401397 protein; n=2; Catarrhini|Rep:...    39   0.021
UniRef50_A4D0T7 Cluster: Hypothetical gene supported by BX537645...    39   0.021
UniRef50_A7CT78 Cluster: Alpha/beta hydrolase fold-3 domain prot...    36   0.15 
UniRef50_UPI0000F1E1B4 Cluster: PREDICTED: hypothetical protein;...    32   2.4  
UniRef50_Q9L7Y1 Cluster: Benzoate transport protein; n=8; Proteo...    32   3.2  
UniRef50_Q6VEI0 Cluster: NADH-ubiquinone oxidoreductase chain 1;...    32   3.2  
UniRef50_Q8PI70 Cluster: Sensor protein; n=11; Xanthomonadaceae|...    31   4.3  
UniRef50_A0AI54 Cluster: Complete genome; n=9; Listeria|Rep: Com...    31   4.3  
UniRef50_Q617S1 Cluster: Putative uncharacterized protein CBG148...    31   4.3  
UniRef50_Q22NQ1 Cluster: Putative uncharacterized protein; n=1; ...    31   4.3  
UniRef50_Q8A294 Cluster: Pyrophosphate-energized proton pump (EC...    31   7.5  
UniRef50_Q8DKU7 Cluster: Tlr0758 protein; n=1; Synechococcus elo...    30   9.9  
UniRef50_Q1WVM3 Cluster: Hypothetical membrane spanning protein;...    30   9.9  
UniRef50_A2U6M1 Cluster: Major facilitator superfamily MFS_1; n=...    30   9.9  
UniRef50_A0P364 Cluster: Putative uncharacterized protein; n=1; ...    30   9.9  
UniRef50_P77328 Cluster: Putative purine permease ybbY; n=19; En...    30   9.9  

>UniRef50_Q32Q38 Cluster: LOC401397 protein; n=2; Catarrhini|Rep:
           LOC401397 protein - Homo sapiens (Human)
          Length = 59

 Score = 39.1 bits (87), Expect = 0.021
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -2

Query: 336 QLCFLLFTILGISNVEASTGYDFGDFLATVLGIGIAVVGILACLGNYARQR 184
           QL  +L ++L +  V  +   + GD +A +LG+ +++ GI ACLG YAR+R
Sbjct: 7   QLSLVLMSLLLVLPVVEAV--EAGDAIALLLGVVLSITGICACLGVYARKR 55


>UniRef50_A4D0T7 Cluster: Hypothetical gene supported by BX537645;
           n=2; Homo/Pan/Gorilla group|Rep: Hypothetical gene
           supported by BX537645 - Homo sapiens (Human)
          Length = 187

 Score = 39.1 bits (87), Expect = 0.021
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -2

Query: 336 QLCFLLFTILGISNVEASTGYDFGDFLATVLGIGIAVVGILACLGNYARQR 184
           QL  +L ++L +  V  +   + GD +A +LG+ +++ GI ACLG YAR+R
Sbjct: 135 QLSLVLMSLLLVLPVVEAV--EAGDAIALLLGVVLSITGICACLGVYARKR 183


>UniRef50_A7CT78 Cluster: Alpha/beta hydrolase fold-3 domain
           protein; n=1; Opitutaceae bacterium TAV2|Rep: Alpha/beta
           hydrolase fold-3 domain protein - Opitutaceae bacterium
           TAV2
          Length = 325

 Score = 36.3 bits (80), Expect = 0.15
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -3

Query: 158 IKTCHLVSAHASLE*MNMEKNISFHPIYLSSIQETSKLY 42
           IK C +++ H  L  +N EKN   H ++L S +E  KLY
Sbjct: 205 IKACVVMATHMDLVALNREKNSLGHVLFLGSFRENQKLY 243


>UniRef50_UPI0000F1E1B4 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 99

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 316 HNSWYKQCGSIYRLRLW*LFGYCFRYRYSR 227
           H  W+++   +Y +  W L GYCF Y Y +
Sbjct: 3   HVKWHRRASMLYAMGTWTLLGYCF-YSYKK 31


>UniRef50_Q9L7Y1 Cluster: Benzoate transport protein; n=8;
           Proteobacteria|Rep: Benzoate transport protein -
           Pseudomonas putida
          Length = 443

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 333 LCFLLFTILGISNVEASTGYDFGDF-LATVLGIGIAVVGILACLGNYARQRARNEFI 166
           +CF LF++  I N  AS+  +FG +     LG G  +   +A +  YA +R R+  +
Sbjct: 91  ICFALFSVATILNGFASSPSEFGIYRFIAGLGCGGLMPNAVALMNEYAPKRLRSTLV 147


>UniRef50_Q6VEI0 Cluster: NADH-ubiquinone oxidoreductase chain 1;
           n=1; Siphonodentalium lobatum|Rep: NADH-ubiquinone
           oxidoreductase chain 1 - Siphonodentalium lobatum
          Length = 295

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +1

Query: 28  F*LILYSLEVSWIDDR--YMGWNEIFFSIFIYSRLACAETRWQVLMNLYKLVSRPLPCVI 201
           F L L SL VS       Y+ W+ +   +FIYSR +    R+ +LM     +  PL  V+
Sbjct: 226 FILFLSSLTVSLFFPHSFYLMWSMVLSLVFIYSRGSLPRFRYDLLMMFSWKIILPLSIVV 285

Query: 202 TQTG 213
              G
Sbjct: 286 LMVG 289


>UniRef50_Q8PI70 Cluster: Sensor protein; n=11;
           Xanthomonadaceae|Rep: Sensor protein - Xanthomonas
           axonopodis pv. citri
          Length = 1225

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 176 FLALCRA*LPKQAKIPTTAIPIPKTVAKKSP 268
           ++ LC A LP QA+ P T +PI  T+A   P
Sbjct: 47  WVCLCLAVLPVQARTPATPVPIQLTIADGLP 77


>UniRef50_A0AI54 Cluster: Complete genome; n=9; Listeria|Rep:
           Complete genome - Listeria welshimeri serovar 6b (strain
           ATCC 35897 / DSM 20650 /SLCC5334)
          Length = 64

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -2

Query: 324 LLFTILGISNVEASTGYDFGDFLATVLGIGIAVVGILACLGNYA 193
           L+F  LG+SN+  S  +DF D    ++G  + ++G++     Y+
Sbjct: 16  LVFVFLGLSNIGISIFWDFSDLENLMVGSLLIIIGLITLRVRYS 59


>UniRef50_Q617S1 Cluster: Putative uncharacterized protein CBG14850;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG14850 - Caenorhabditis
           briggsae
          Length = 244

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 176 FLALCRA*LPKQAKIPTTAI-PIPKTVAKKSP 268
           FL LC A +P Q   PTT   P+P T A +SP
Sbjct: 12  FLELCYACIPTQQVEPTTTTTPVPATTATESP 43


>UniRef50_Q22NQ1 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 670

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 339 FQLCFLLFTILGISNVEASTGYDFGDFLATVLGIGIAVVGILACL 205
           FQ+   +F IL I  + A  GY FG  L T LGI  A+   L  +
Sbjct: 198 FQVSLKIFVILSILILFALVGYSFGKHL-TSLGIAAAIAAFLIAI 241


>UniRef50_Q8A294 Cluster: Pyrophosphate-energized proton pump (EC
           3.6.1.1) (Pyrophosphate- energized inorganic
           pyrophosphatase) (H(+)-PPase); n=9; Bacteria|Rep:
           Pyrophosphate-energized proton pump (EC 3.6.1.1)
           (Pyrophosphate- energized inorganic pyrophosphatase)
           (H(+)-PPase) - Bacteroides thetaiotaomicron
          Length = 734

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -2

Query: 303 ISNVEASTGYDFGDFLATVLGIGIAVVGILACLG 202
           I++   ++G+DF +    + GIGIA VG+L+ LG
Sbjct: 409 IASFLLASGFDFSNVGMGLYGIGIAAVGMLSTLG 442


>UniRef50_Q8DKU7 Cluster: Tlr0758 protein; n=1; Synechococcus
           elongatus|Rep: Tlr0758 protein - Synechococcus elongatus
           (Thermosynechococcus elongatus)
          Length = 673

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 221 PTTAIPIPKTVAKKSPKS*PVDASTLLIPRIVNNRKHNWKYI 346
           P    P P  VA  +P   P   +  L P +  +R H W+ I
Sbjct: 522 PPPVTPAPTPVATPTPTPQPTTLAITLTPEMARDRLHTWQQI 563


>UniRef50_Q1WVM3 Cluster: Hypothetical membrane spanning protein;
           n=1; Lactobacillus salivarius subsp. salivarius
           UCC118|Rep: Hypothetical membrane spanning protein -
           Lactobacillus salivarius subsp. salivarius (strain
           UCC118)
          Length = 597

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 333 LCFLLFTILGISNVEASTGYDFGDFLATV 247
           LC +  +++GI N++A   YD  D+   V
Sbjct: 9   LCCIFLSLIGIKNIQADVNYDVKDYTVNV 37


>UniRef50_A2U6M1 Cluster: Major facilitator superfamily MFS_1; n=1;
           Bacillus coagulans 36D1|Rep: Major facilitator
           superfamily MFS_1 - Bacillus coagulans 36D1
          Length = 379

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -2

Query: 312 ILGISNVEASTGYDFGDFLATVLGIGIAVVGILACLG 202
           I G+ ++    G  F +F++  +GIGI+++G    +G
Sbjct: 263 IYGLGSIGGIIGAYFSEFISKKMGIGISIIGATVLIG 299


>UniRef50_A0P364 Cluster: Putative uncharacterized protein; n=1;
           Stappia aggregata IAM 12614|Rep: Putative
           uncharacterized protein - Stappia aggregata IAM 12614
          Length = 447

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 186 RARNEFI*VHQNLPSCFSTRKSRINEYGKKYLIPS-HIPVIYPRNFQAI 43
           R     I +HQ +P+ F T  SRI E    + IPS  I    P N + I
Sbjct: 296 RLHGNVIGLHQGIPAVFFTYDSRIRELSTLFAIPSVEIEDYMPINLEKI 344


>UniRef50_P77328 Cluster: Putative purine permease ybbY; n=19;
           Enterobacteriaceae|Rep: Putative purine permease ybbY -
           Escherichia coli (strain K12)
          Length = 433

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -2

Query: 315 TILGISNVEASTGYDFGDFLATVLGIGIAVVGILACL 205
           TIL I+  EAS G    D +AT L +GIA+ G+L  L
Sbjct: 81  TILTITLGEASRGTPIND-IATSLAVGIALSGVLTML 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,696,002
Number of Sequences: 1657284
Number of extensions: 7131512
Number of successful extensions: 18178
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18169
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)