Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h20r
         (355 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   0.53 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   0.53 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   0.92 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   2.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   2.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   3.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   3.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   3.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   3.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   3.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   4.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   4.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    20   6.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   6.5  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    20   8.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   8.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   8.6  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 0.53
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +1

Query: 151 VLMNLYKLVSRPLPCVITQTG*NSYNGYTDT*NSSQKVTKV 273
           +L   Y+L++  L  ++ +T   S  G+TD  N  +K  ++
Sbjct: 204 ILRVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKEI 244


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 0.53
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +1

Query: 151 VLMNLYKLVSRPLPCVITQTG*NSYNGYTDT*NSSQKVTKV 273
           +L   Y+L++  L  ++ +T   S  G+TD  N  +K  ++
Sbjct: 204 ILRVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKEI 244


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 142 RWQVLMNLYKLVSRPLPCVITQTG*NSYNGYTDT*NSSQKVTKVVTCR-CFHIAYTKN 312
           ++Q L+ L K   +PL CV++    + Y   T+   SS +    +T R  FH A T++
Sbjct: 210 KFQPLLRLPKFKKKPLLCVVSTL--SCYLERTELLRSSGETRLFLTHRKPFHPASTQS 265


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 118 NK*IWKKISHSIPYTCHLSKKLPSYI 41
           N+ IWKK+       C L +K+   I
Sbjct: 260 NEIIWKKLREDYTRQCRLVRKVDKEI 285



 Score = 21.8 bits (44), Expect = 2.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 312 ILGISNVEASTGYDFGDFLATVLGIGIA 229
           I  ISN++ + G  FGD    +L +  A
Sbjct: 523 IFQISNLQTTFGGTFGDTFIILLSMAFA 550


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 352 FQNVFPIVFPVIHNSWYKQC 293
           F+  FP VF +I  S +K C
Sbjct: 223 FRVAFPSVFTLIDYSLWKAC 242


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 333 LCFLLFTILG 304
           +CFLL TILG
Sbjct: 47  ICFLLSTILG 56


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 20  ISTFNLFYIAWKF 58
           I TFNLFY+ + F
Sbjct: 316 IYTFNLFYLCFCF 328


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 178 KRVYIGSSKLAILFQH 131
           +RV+I  SK+  L QH
Sbjct: 217 RRVFISFSKICYLHQH 232



 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 98  FFPYSFILDLRVLKQ 142
           FFP ++ L   VLKQ
Sbjct: 348 FFPINYTLVFSVLKQ 362


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 20  ISTFNLFYIAWKF 58
           I TFNLFY+ + F
Sbjct: 272 IYTFNLFYLCFCF 284


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 178 KRVYIGSSKLAILFQH 131
           +RV+I  SK+  L QH
Sbjct: 235 RRVFISFSKICYLHQH 250


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/41 (21%), Positives = 19/41 (46%)
 Frame = -2

Query: 321 LFTILGISNVEASTGYDFGDFLATVLGIGIAVVGILACLGN 199
           L+    +SN   S+   F +++ T   +   ++  L  +GN
Sbjct: 46  LYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGN 86


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/41 (21%), Positives = 19/41 (46%)
 Frame = -2

Query: 321 LFTILGISNVEASTGYDFGDFLATVLGIGIAVVGILACLGN 199
           L+    +SN   S+   F +++ T   +   ++  L  +GN
Sbjct: 46  LYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGN 86


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 206 KQAKIPTTAIPIPKTVAKKSPKS*PVDAS 292
           K  +IP   +P P+    ++ +S P  AS
Sbjct: 387 KSDEIPPEPVPTPEPQPTQTTESEPTQAS 415


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 352 FQNVFPIVFPVIHNSWY 302
           FQ+++ IV+ ++   WY
Sbjct: 252 FQDIYMIVYIIVVIFWY 268


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 352 FQNVFPIVFPVIHNSWY 302
           FQ+++ IV+ ++   WY
Sbjct: 252 FQDIYMIVYIIVVIFWY 268


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 189 AVRNYPNRLKFLQRLYRYL 245
           A+RN P +   L  +Y Y+
Sbjct: 95  AIRNSPEKRLTLNGIYEYI 113


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 348 KMYFQLCFLLFTILGISNV 292
           K+Y  L FL++TI  I +V
Sbjct: 33  KLYPVLMFLIYTITEIYSV 51


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -2

Query: 177 NEFI*VHQNLPSCFSTRKSRINEYGKKYLIPSHIPVIYPRNFQAI 43
           N F  V  +    F+  K + +   KK+++ +   V YP    AI
Sbjct: 65  NAFANVSPSKTKFFNLIKRKDSPVQKKHILKNVFGVAYPGELLAI 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,793
Number of Sequences: 336
Number of extensions: 2083
Number of successful extensions: 20
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)