Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h20r
(355 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 25 0.35
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 23 1.4
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 1.4
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 2.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 3.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 3.3
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 4.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 4.3
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 20 7.5
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 20 9.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 9.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 9.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 9.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 9.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 9.9
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 24.6 bits (51), Expect = 0.35
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 312 ILGISNVEASTGYDFGDFLATVLGIGIAVVGILACLG 202
ILG+S + TG F VLG I V+ C G
Sbjct: 37 ILGVSK-QIETGLAFPSITLIVLGSIIFVISFFGCCG 72
Score = 20.2 bits (40), Expect = 7.5
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 264 DFLATVLGIGIAVVGIL 214
+F+ V G+GI +G+L
Sbjct: 16 NFVFAVCGLGILTLGVL 32
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 183 PFAVRNYPNRLKFLQRLYRYLK 248
PF +NYP + + R Y+ +K
Sbjct: 81 PFMQQNYPYEWQLILRRYKIMK 102
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 22.6 bits (46), Expect = 1.4
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 200 LPK-QAKIPTTAIPIPKTVAKKSPKS*P 280
LPK + IP T +PK KSPK P
Sbjct: 203 LPKWKDGIPVTLTTVPKHSKTKSPKLRP 230
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.8 bits (44), Expect = 2.5
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = +2
Query: 92 RYFFPYSFIL 121
R+FFP+SF++
Sbjct: 364 RFFFPFSFLI 373
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 3.3
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -3
Query: 206 WVITHGKGRETSLYRFIKTCHLVSAHASLE*MNMEKNISFHPIYLSSIQETSKLYRIS 33
W H G + Y T H +AH +L+ + + ++ + H + T +LY S
Sbjct: 1424 WKSGHNGGASLTGY----TLHYRTAHGNLDELQLSRHATSHELKGLLCGNTYQLYLTS 1477
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 3.3
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -3
Query: 206 WVITHGKGRETSLYRFIKTCHLVSAHASLE*MNMEKNISFHPIYLSSIQETSKLYRIS 33
W H G + Y T H +AH +L+ + + ++ + H + T +LY S
Sbjct: 1420 WKSGHNGGASLTGY----TLHYRTAHGNLDELQLSRHATSHELKGLLCGNTYQLYLTS 1473
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.0 bits (42), Expect = 4.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 95 ISFHPIYLSSIQETSKLYR 39
I FH I L S+ S +YR
Sbjct: 459 IYFHSIVLGSLLNPSHMYR 477
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 4.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 217 FSLFG*LRTAKGEKRVYIGSSKLAI 143
FSL T+KGE R+ G K AI
Sbjct: 395 FSLLRDAFTSKGEYRMSTGEMKEAI 419
Score = 20.2 bits (40), Expect = 7.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 192 RQRARNEFI*VHQNLPSCFSTRKSRINEYGKKYLIPSHIPVIYPRN 55
R R+ +EF HQ L +K+ + K L +PVI P N
Sbjct: 735 RARSESEFEMYHQQLQGVAKNKKNVGSMSRNKAL----LPVIKPAN 776
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.2 bits (40), Expect = 7.5
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +2
Query: 203 PKQAKIPTTAIPIPKTV 253
P+ +PT P P TV
Sbjct: 151 PRGGSLPTPVTPTPTTV 167
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = -1
Query: 142 LFQHTQV*NK*IWKKISHSIPYTCHLSKKLPSY 44
L+ H + N+ +++S+ +PY + P Y
Sbjct: 260 LYSHKLLLNRYYLERLSNDLPYLEEFDWQKPFY 292
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 77 IWDGMRYFFPYSFILDLRVLKQDGK 151
+WDG+ F Y+ +L+ + G+
Sbjct: 365 VWDGVCMCFIYASLLEFVCVNYVGR 389
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 77 IWDGMRYFFPYSFILDLRVLKQDGK 151
+WDG+ F Y+ +L+ + G+
Sbjct: 334 VWDGVCMCFIYASLLEFVCVNYVGR 358
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 77 IWDGMRYFFPYSFILDLRVLKQDGK 151
+WDG+ F Y+ +L+ + G+
Sbjct: 385 VWDGVCMCFIYASLLEFVCVNYVGR 409
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 77 IWDGMRYFFPYSFILDLRVLKQDGK 151
+WDG+ F Y+ +L+ + G+
Sbjct: 334 VWDGVCMCFIYASLLEFVCVNYVGR 358
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +1
Query: 43 YSLEVSWIDDRYMGWNEIFFSIFIYSRLACAE 138
++L+V+W WN ++ RL+ +E
Sbjct: 991 HTLKVTWKPPPREDWNGEILGYYVGYRLSSSE 1022
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,423
Number of Sequences: 438
Number of extensions: 2560
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8184330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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