SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h20f
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   0.66 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   0.66 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   1.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   2.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   3.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   3.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   4.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   4.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   4.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   4.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.1  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    20   8.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   8.1  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 205 VLMNLYKLVSRPLPCVITQTG*NSYNGYTDT*NSSQKVTKV 83
           +L   Y+L++  L  ++ +T   S  G+TD  N  +K  ++
Sbjct: 204 ILRVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKEI 244


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 205 VLMNLYKLVSRPLPCVITQTG*NSYNGYTDT*NSSQKVTKV 83
           +L   Y+L++  L  ++ +T   S  G+TD  N  +K  ++
Sbjct: 204 ILRVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRKSKEI 244


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -1

Query: 214 RWQVLMNLYKLVSRPLPCVITQTG*NSYNGYTDT*NSSQKVTKVVTCR-CFHIAYTKN 44
           ++Q L+ L K   +PL CV++    + Y   T+   SS +    +T R  FH A T++
Sbjct: 210 KFQPLLRLPKFKKKPLLCVVSTL--SCYLERTELLRSSGETRLFLTHRKPFHPASTQS 265


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 238 NK*IWKKISHSIPYTCHLSKKLPSYI 315
           N+ IWKK+       C L +K+   I
Sbjct: 260 NEIIWKKLREDYTRQCRLVRKVDKEI 285



 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 44  ILGISNVEASTGYDFGDFLATVLGIGIA 127
           I  ISN++ + G  FGD    +L +  A
Sbjct: 523 IFQISNLQTTFGGTFGDTFIILLSMAFA 550


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 299 NFQAI*NKLKVLIYCFVII*M**ILTNNTFITK 397
           N   + NK  + I CFV++ +  I+T  TF+ +
Sbjct: 81  NNSLVINKRLIFIECFVMMALTLIVTLFTFLAR 113


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 4   FQNVFPIVFPVIHNSWYKQC 63
           F+  FP VF +I  S +K C
Sbjct: 223 FRVAFPSVFTLIDYSLWKAC 242


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 299 NFQAI*NKLKVLIYCFVII*M**ILTNNTFITK 397
           N   + NK  + I CFV++ +  I+T  TF+ +
Sbjct: 81  NNSLVINKRLIFIECFVMMALTLIVTLFTFLAR 113


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory
          receptor candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 23 LCFLLFTILG 52
          +CFLL TILG
Sbjct: 47 ICFLLSTILG 56


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 336 ISTFNLFYIAWKF 298
           I TFNLFY+ + F
Sbjct: 316 IYTFNLFYLCFCF 328


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 178 KRVYIGSSKLAILFQH 225
           +RV+I  SK+  L QH
Sbjct: 217 RRVFISFSKICYLHQH 232


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 336 ISTFNLFYIAWKF 298
           I TFNLFY+ + F
Sbjct: 272 IYTFNLFYLCFCF 284


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 178 KRVYIGSSKLAILFQH 225
           +RV+I  SK+  L QH
Sbjct: 235 RRVFISFSKICYLHQH 250


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/41 (21%), Positives = 19/41 (46%)
 Frame = +2

Query: 35  LFTILGISNVEASTGYDFGDFLATVLGIGIAVVGILACLGN 157
           L+    +SN   S+   F +++ T   +   ++  L  +GN
Sbjct: 46  LYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGN 86


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/41 (21%), Positives = 19/41 (46%)
 Frame = +2

Query: 35  LFTILGISNVEASTGYDFGDFLATVLGIGIAVVGILACLGN 157
           L+    +SN   S+   F +++ T   +   ++  L  +GN
Sbjct: 46  LYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGN 86


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 150 KQAKIPTTAIPIPKTVAKKSPKS*PVDAS 64
           K  +IP   +P P+    ++ +S P  AS
Sbjct: 387 KSDEIPPEPVPTPEPQPTQTTESEPTQAS 415


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 4   FQNVFPIVFPVIHNSWY 54
           FQ+++ IV+ ++   WY
Sbjct: 252 FQDIYMIVYIIVVIFWY 268


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 4   FQNVFPIVFPVIHNSWY 54
           FQ+++ IV+ ++   WY
Sbjct: 252 FQDIYMIVYIIVVIFWY 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,875
Number of Sequences: 336
Number of extensions: 2375
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)

- SilkBase 1999-2023 -