Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h20f
         (409 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ239731-1|ABB76248.1|  133|Drosophila melanogaster kl-2 protein...    28   4.1  
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei...    28   4.1  
U51858-1|AAC47133.1|  228|Drosophila melanogaster boule protein ...    27   9.5  
AE014296-1589|AAN11987.1|  189|Drosophila melanogaster CG4760-PC...    27   9.5  
AE014296-1588|AAF50316.3|  189|Drosophila melanogaster CG4760-PA...    27   9.5  
AE014296-1587|AAN11986.1|  228|Drosophila melanogaster CG4760-PD...    27   9.5  
AE014296-1586|AAF50317.3|  228|Drosophila melanogaster CG4760-PB...    27   9.5  

>DQ239731-1|ABB76248.1|  133|Drosophila melanogaster kl-2 protein
           protein.
          Length = 133

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 163 CVITQTG*NSYNGYTDT*NSSQKVTKVVTCRCF 65
           CVI QT    + GY  T NS + V   +T RC+
Sbjct: 4   CVIRQTNTEHWYGYEYTGNSGRLVITPLTDRCY 36


>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
            protein.
          Length = 4167

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 163  CVITQTG*NSYNGYTDT*NSSQKVTKVVTCRCF 65
            CVI QT    + GY  T NS + V   +T RC+
Sbjct: 1482 CVIRQTNTEHWYGYEYTGNSGRLVITPLTDRCY 1514


>U51858-1|AAC47133.1|  228|Drosophila melanogaster boule protein
           protein.
          Length = 228

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +2

Query: 206 LPSCFSTRKSRINEYGKKYLIPSHIPVIYPRNFQ 307
           +P+ +     +   + + Y +P ++P I+P+N+Q
Sbjct: 155 VPAIYPPSAMQYQPFYQYYSVPMNVPTIWPQNYQ 188


>AE014296-1589|AAN11987.1|  189|Drosophila melanogaster CG4760-PC,
           isoform C protein.
          Length = 189

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +2

Query: 206 LPSCFSTRKSRINEYGKKYLIPSHIPVIYPRNFQ 307
           +P+ +     +   + + Y +P ++P I+P+N+Q
Sbjct: 155 VPAIYPPSAMQYQPFYQYYSVPMNVPTIWPQNYQ 188


>AE014296-1588|AAF50316.3|  189|Drosophila melanogaster CG4760-PA,
           isoform A protein.
          Length = 189

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +2

Query: 206 LPSCFSTRKSRINEYGKKYLIPSHIPVIYPRNFQ 307
           +P+ +     +   + + Y +P ++P I+P+N+Q
Sbjct: 155 VPAIYPPSAMQYQPFYQYYSVPMNVPTIWPQNYQ 188


>AE014296-1587|AAN11986.1|  228|Drosophila melanogaster CG4760-PD,
           isoform D protein.
          Length = 228

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +2

Query: 206 LPSCFSTRKSRINEYGKKYLIPSHIPVIYPRNFQ 307
           +P+ +     +   + + Y +P ++P I+P+N+Q
Sbjct: 155 VPAIYPPSAMQYQPFYQYYSVPMNVPTIWPQNYQ 188


>AE014296-1586|AAF50317.3|  228|Drosophila melanogaster CG4760-PB,
           isoform B protein.
          Length = 228

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +2

Query: 206 LPSCFSTRKSRINEYGKKYLIPSHIPVIYPRNFQ 307
           +P+ +     +   + + Y +P ++P I+P+N+Q
Sbjct: 155 VPAIYPPSAMQYQPFYQYYSVPMNVPTIWPQNYQ 188


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,399,734
Number of Sequences: 53049
Number of extensions: 342865
Number of successful extensions: 928
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)