Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10h19r
(437 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 186 4e-47
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 186 4e-47
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 186 4e-47
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 186 4e-47
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 186 4e-47
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 186 4e-47
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 186 4e-47
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 186 4e-47
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 165 8e-41
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 40 0.005
BX537845-1|CAD97854.1| 1156|Homo sapiens hypothetical protein pr... 30 3.0
BC043404-1|AAH43404.1| 1143|Homo sapiens non-SMC condensin II co... 30 3.0
BC020560-1|AAH20560.1| 935|Homo sapiens NCAPG2 protein protein. 30 3.0
AK023347-1|BAB14534.1| 698|Homo sapiens protein ( Homo sapiens ... 30 3.0
AK022744-1|BAB14219.1| 774|Homo sapiens protein ( Homo sapiens ... 30 3.0
AK000318-1|BAA91081.1| 888|Homo sapiens protein ( Homo sapiens ... 30 3.0
AB065857-1|BAC06075.1| 315|Homo sapiens seven transmembrane hel... 29 5.3
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 29 7.0
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 29 7.0
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 29 7.0
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.0
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.0
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.0
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.0
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.0
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.0
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.0
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.0
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 29 7.0
BC058014-1|AAH58014.1| 332|Homo sapiens C12orf29 protein protein. 29 9.3
BC035136-1|AAH35136.2| 323|Homo sapiens C12orf29 protein protein. 29 9.3
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 186 bits (452), Expect = 4e-47
Identities = 88/128 (68%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
Frame = -1
Query: 398 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 219
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 218 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 45
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 44 RYKSGKNQ 21
RYK+GKN+
Sbjct: 121 RYKTGKNK 128
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 186 bits (452), Expect = 4e-47
Identities = 88/128 (68%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
Frame = -1
Query: 398 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 219
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 218 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 45
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 44 RYKSGKNQ 21
RYK+GKN+
Sbjct: 121 RYKTGKNK 128
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 186 bits (452), Expect = 4e-47
Identities = 88/128 (68%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
Frame = -1
Query: 398 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 219
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 218 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 45
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 44 RYKSGKNQ 21
RYK+GKN+
Sbjct: 121 RYKTGKNK 128
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 186 bits (452), Expect = 4e-47
Identities = 88/128 (68%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
Frame = -1
Query: 398 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 219
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 218 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 45
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 44 RYKSGKNQ 21
RYK+GKN+
Sbjct: 121 RYKTGKNK 128
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 186 bits (452), Expect = 4e-47
Identities = 88/128 (68%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
Frame = -1
Query: 398 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 219
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 218 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 45
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 44 RYKSGKNQ 21
RYK+GKN+
Sbjct: 121 RYKTGKNK 128
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 186 bits (452), Expect = 4e-47
Identities = 88/128 (68%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
Frame = -1
Query: 398 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 219
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 218 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 45
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 44 RYKSGKNQ 21
RYK+GKN+
Sbjct: 121 RYKTGKNK 128
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 186 bits (452), Expect = 4e-47
Identities = 88/128 (68%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
Frame = -1
Query: 398 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 219
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 218 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 45
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 44 RYKSGKNQ 21
RYK+GKN+
Sbjct: 121 RYKTGKNK 128
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 186 bits (452), Expect = 4e-47
Identities = 88/128 (68%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
Frame = -1
Query: 398 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 219
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 218 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 45
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 44 RYKSGKNQ 21
RYK+GKN+
Sbjct: 121 RYKTGKNK 128
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 165 bits (400), Expect = 8e-41
Identities = 78/117 (66%), Positives = 94/117 (80%), Gaps = 2/117 (1%)
Frame = -1
Query: 365 LVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 186
LVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK F
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75
Query: 185 VKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNQ 21
VKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEERYK+GKN+
Sbjct: 76 VKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNK 132
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 39.5 bits (88), Expect = 0.005
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = -1
Query: 110 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNQ 21
KD+ +DPA ++K R +V+FEERYK+GKN+
Sbjct: 2 KDVFRDPALKRKARREAKVKFEERYKTGKNK 32
>BX537845-1|CAD97854.1| 1156|Homo sapiens hypothetical protein
protein.
Length = 1156
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 300 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 193
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 574 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 609
>BC043404-1|AAH43404.1| 1143|Homo sapiens non-SMC condensin II
complex, subunit G2 protein.
Length = 1143
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 300 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 193
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 574 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 609
>BC020560-1|AAH20560.1| 935|Homo sapiens NCAPG2 protein protein.
Length = 935
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 300 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 193
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 366 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 401
>AK023347-1|BAB14534.1| 698|Homo sapiens protein ( Homo sapiens
cDNA FLJ13285 fis, clone OVARC1001129. ).
Length = 698
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 300 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 193
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 129 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 164
>AK022744-1|BAB14219.1| 774|Homo sapiens protein ( Homo sapiens
cDNA FLJ12682 fis, clone NT2RM4002452. ).
Length = 774
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 300 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 193
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 205 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 240
>AK000318-1|BAA91081.1| 888|Homo sapiens protein ( Homo sapiens
cDNA FLJ20311 fis, clone HEP07319. ).
Length = 888
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 300 LRQAVRACFRRWYRQVPPESAQEDGKE*NPQEVQDK 193
+R + AC +R R+ P + +EDG+E V DK
Sbjct: 366 IRHCLNACIQRAVREPPEDEEEEDGREKENVTVLDK 401
>AB065857-1|BAC06075.1| 315|Homo sapiens seven transmembrane helix
receptor protein.
Length = 315
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 108 FCAEFFKAEVNCITCWHQVIIVYNLHERLYL 200
FCA + A V IT H + I + LHE +YL
Sbjct: 34 FCATYAVAVVGNITLLHVIRIDHTLHEPMYL 64
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 74 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 110
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 29.1 bits (62), Expect = 7.0
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = -1
Query: 413 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 303
++ K+ + PG ++++L+GR+ G++ + +K G
Sbjct: 135 QHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG 171
>BC058014-1|AAH58014.1| 332|Homo sapiens C12orf29 protein protein.
Length = 332
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 308 EGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 186
+G SD+PY A +DR P K ++ KN +H + K F
Sbjct: 73 KGASDQPY---LWARLDRKPNKQAEKRFKNFLHSKENPKEF 110
>BC035136-1|AAH35136.2| 323|Homo sapiens C12orf29 protein protein.
Length = 323
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 308 EGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 186
+G SD+PY A +DR P K ++ KN +H + K F
Sbjct: 64 KGASDQPY---LWARLDRKPNKQAEKRFKNFLHSKENPKEF 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,094,677
Number of Sequences: 237096
Number of extensions: 1384620
Number of successful extensions: 7025
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7010
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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