Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10h17r
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40797-3|AAB37550.2|  238|Caenorhabditis elegans Saposin-like pr...    30   1.5  
U40797-2|AAB37549.2|  429|Caenorhabditis elegans Saposin-like pr...    30   1.5  
U27312-13|AAA68256.1|  162|Caenorhabditis elegans Hypothetical p...    29   4.5  
U61957-2|AAX55703.1|  386|Caenorhabditis elegans Temporarily ass...    28   7.9  

>U40797-3|AAB37550.2|  238|Caenorhabditis elegans Saposin-like
           protein family protein10, isoform a protein.
          Length = 238

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 355 YLTENVIYL*QQWR*FCNLFVSDYNQHMIEEIGLKIQVP 471
           +L ENV     Q+R FC+L V +Y    I+E+   +Q P
Sbjct: 165 FLRENVCKSLGQYRGFCDLVVDEYLPQFIQELDAILQDP 203


>U40797-2|AAB37549.2|  429|Caenorhabditis elegans Saposin-like
           protein family protein10, isoform b protein.
          Length = 429

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 355 YLTENVIYL*QQWR*FCNLFVSDYNQHMIEEIGLKIQVP 471
           +L ENV     Q+R FC+L V +Y    I+E+   +Q P
Sbjct: 165 FLRENVCKSLGQYRGFCDLVVDEYLPQFIQELDAILQDP 203


>U27312-13|AAA68256.1|  162|Caenorhabditis elegans Hypothetical
           protein F26A1.14 protein.
          Length = 162

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 482 LECQLSSDEFHRNGLSVAAHIKMGLLKHSQQGWQHIIIG 598
           +EC+  S++    G S+ + I    LK +Q GW+H++IG
Sbjct: 121 IECKKRSEKDEEIG-SIESKIMQ--LKENQLGWEHLVIG 156


>U61957-2|AAX55703.1|  386|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 49, isoform b protein.
          Length = 386

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/78 (21%), Positives = 35/78 (44%)
 Frame = -3

Query: 300 PSTGPYTSYFSFISFIRRWHQMIQVPNTQVTTT*DEAWDIKMQEWNLEEVQFLNHKIMVL 121
           P  G + +Y  ++  I+ +  MI + +T  T    + W +      L+E +    K+M  
Sbjct: 205 PDAGWWKTYNVYLVIIQYFVPMI-ILDTAYTMIAVKIWSLSQSRVELDETKMATQKLMRT 263

Query: 120 LHISKVLCTLCIYNIDMF 67
           L I     +LC + ++ +
Sbjct: 264 LIIVVACFSLCWFPLETY 281


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,376,061
Number of Sequences: 27780
Number of extensions: 354281
Number of successful extensions: 881
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)